RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 PREX1Q8TCU6 1659 aa17.23■□□□□ 0.35
TUBA1B-201ENST00000332858 NFKBIBQ15653 356 aa17.23■□□□□ 0.35
TUBA1B-201ENST00000332858 USP35Q9P2H5 1018 aa17.22■□□□□ 0.35
TUBA1B-201ENST00000332858 WAPLQ7Z5K2 1190 aa17.22■□□□□ 0.35
TUBA1B-201ENST00000332858 TERF2IPQ9NYB0 399 aa17.22■□□□□ 0.35
TUBA1B-201ENST00000332858 COL3A1P02461 1466 aaPredicted RBP17.21■□□□□ 0.35
TUBA1B-201ENST00000332858 NLRP1Q9C000 1473 aa17.21■□□□□ 0.35
TUBA1B-201ENST00000332858 ADGRB2O60241 1585 aa17.21■□□□□ 0.35
TUBA1B-201ENST00000332858 PDZRN3Q9UPQ7 1066 aa17.21■□□□□ 0.35
TUBA1B-201ENST00000332858 STAG3Q9UJ98 1225 aa17.2■□□□□ 0.34
TUBA1B-201ENST00000332858 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.2■□□□□ 0.34
TUBA1B-201ENST00000332858 MAPK8IP3Q9UPT6 1336 aa17.2■□□□□ 0.34
TUBA1B-201ENST00000332858 MVPQ14764 893 aaKnown RBP17.2■□□□□ 0.34
TUBA1B-201ENST00000332858 PMFBP1Q8TBY8 1022 aa17.2■□□□□ 0.34
TUBA1B-201ENST00000332858 SSH1Q8WYL5 1049 aa17.2■□□□□ 0.34
TUBA1B-201ENST00000332858 ATAD2Q6PL18 1390 aa17.19■□□□□ 0.34
TUBA1B-201ENST00000332858 HOMEZQ8IX15 550 aa17.19■□□□□ 0.34
TUBA1B-201ENST00000332858 RIPK4P57078 832 aa17.19■□□□□ 0.34
TUBA1B-201ENST00000332858 ZKSCAN2Q63HK3 967 aa17.19■□□□□ 0.34
TUBA1B-201ENST00000332858 SMC4Q9NTJ3 1288 aa17.19■□□□□ 0.34
TUBA1B-201ENST00000332858 TRIM27P14373 513 aa17.18■□□□□ 0.34
TUBA1B-201ENST00000332858 FAM69CQ0P6D2 419 aa17.18■□□□□ 0.34
TUBA1B-201ENST00000332858 DZIP1LQ8IYY4 767 aaKnown RBP17.18■□□□□ 0.34
TUBA1B-201ENST00000332858 ALKQ9UM73 1620 aa17.18■□□□□ 0.34
TUBA1B-201ENST00000332858 FTSJ3Q8IY81 847 aaKnown RBP17.17■□□□□ 0.34
TUBA1B-201ENST00000332858 DIAPH1O60610 1272 aaKnown RBP17.17■□□□□ 0.34
TUBA1B-201ENST00000332858 ARHGEF40Q8TER5 1519 aa17.16■□□□□ 0.34
TUBA1B-201ENST00000332858 MLECQ14165 292 aa17.16■□□□□ 0.34
TUBA1B-201ENST00000332858 HDGFL2Q7Z4V5 671 aaPredicted RBP17.16■□□□□ 0.34
TUBA1B-201ENST00000332858 VIRMAQ69YN4 1812 aaKnown RBP17.15■□□□□ 0.34
TUBA1B-201ENST00000332858 RWDD1Q9H446 243 aaPredicted RBP17.15■□□□□ 0.34
TUBA1B-201ENST00000332858 NOB1Q9ULX3 412 aaKnown RBP17.15■□□□□ 0.34
TUBA1B-201ENST00000332858 FRAT2O75474 233 aaPredicted RBP17.14■□□□□ 0.33
TUBA1B-201ENST00000332858 PNPLA6Q8IY17 1366 aa17.14■□□□□ 0.33
TUBA1B-201ENST00000332858 AAMPQ13685 434 aa17.13■□□□□ 0.33
TUBA1B-201ENST00000332858 POLKQ9UBT6 870 aa17.13■□□□□ 0.33
TUBA1B-201ENST00000332858 ITPRIPQ8IWB1 547 aa17.12■□□□□ 0.33
TUBA1B-201ENST00000332858 CLTCQ00610 1675 aaKnown RBP17.12■□□□□ 0.33
TUBA1B-201ENST00000332858 PHACTR3Q96KR7 559 aa17.12■□□□□ 0.33
TUBA1B-201ENST00000332858 ZRANB1Q9UGI0 708 aa17.12■□□□□ 0.33
TUBA1B-201ENST00000332858 HMOX1P09601 288 aa17.12■□□□□ 0.33
TUBA1B-201ENST00000332858 ATF7IPQ6VMQ6 1270 aa17.12■□□□□ 0.33
TUBA1B-201ENST00000332858 THUMPD2Q9BTF0 503 aaKnown RBP17.12■□□□□ 0.33
TUBA1B-201ENST00000332858 NCKAP5LQ9HCH0 1330 aa17.11■□□□□ 0.33
TUBA1B-201ENST00000332858 MED14O60244 1454 aa17.11■□□□□ 0.33
TUBA1B-201ENST00000332858 PRKAR2BP31323 418 aa17.11■□□□□ 0.33
TUBA1B-201ENST00000332858 CT47B1P0C2W7 299 aaPredicted RBP17.11■□□□□ 0.33
TUBA1B-201ENST00000332858 TMEM57Q8N5G2 664 aa17.11■□□□□ 0.33
TUBA1B-201ENST00000332858 ANKRD26Q9UPS8 1709 aa17.1■□□□□ 0.33
TUBA1B-201ENST00000332858 TSPOAP1O95153 1857 aa17.1■□□□□ 0.33
TUBA1B-201ENST00000332858 PODXL2Q9NZ53 605 aa17.1■□□□□ 0.33
TUBA1B-201ENST00000332858 EMILIN1Q9Y6C2 1016 aa17.1■□□□□ 0.33
TUBA1B-201ENST00000332858 RSPH6AQ9H0K4 717 aa17.1■□□□□ 0.33
TUBA1B-201ENST00000332858 IL27Q8NEV9 243 aa17.09■□□□□ 0.33
TUBA1B-201ENST00000332858 A2ML1A8K2U0 1454 aa17.09■□□□□ 0.33
TUBA1B-201ENST00000332858 IL16Q14005 1332 aa17.08■□□□□ 0.32
TUBA1B-201ENST00000332858 FCHSD2O94868 740 aa17.08■□□□□ 0.32
TUBA1B-201ENST00000332858 NME9Q86XW9 330 aa17.08■□□□□ 0.32
TUBA1B-201ENST00000332858 GSE1Q14687 1217 aa17.08■□□□□ 0.32
TUBA1B-201ENST00000332858 AEBP2Q6ZN18 517 aaPredicted RBP17.07■□□□□ 0.32
TUBA1B-201ENST00000332858 SLKQ9H2G2 1235 aaPredicted RBP17.07■□□□□ 0.32
TUBA1B-201ENST00000332858 LRRC7Q96NW7 1537 aa17.07■□□□□ 0.32
TUBA1B-201ENST00000332858 TXNDC2Q86VQ3 553 aa17.07■□□□□ 0.32
TUBA1B-201ENST00000332858 RIMS2Q9UQ26 1411 aa17.06■□□□□ 0.32
TUBA1B-201ENST00000332858 TBC1D32Q96NH3 1257 aa17.06■□□□□ 0.32
TUBA1B-201ENST00000332858 DDX19BQ9UMR2 479 aa17.06■□□□□ 0.32
TUBA1B-201ENST00000332858 ZBTB40Q9NUA8 1239 aa17.05■□□□□ 0.32
TUBA1B-201ENST00000332858 KIF20BQ96Q89 1820 aa17.05■□□□□ 0.32
TUBA1B-201ENST00000332858 METP08581 1390 aa17.05■□□□□ 0.32
TUBA1B-201ENST00000332858 MAP2P11137 1827 aaKnown RBP17.05■□□□□ 0.32
TUBA1B-201ENST00000332858 TSPYL6Q8N831 410 aa17.05■□□□□ 0.32
TUBA1B-201ENST00000332858 ELL2O00472 640 aaPredicted RBP17.04■□□□□ 0.32
TUBA1B-201ENST00000332858 HDAC1Q13547 482 aaPredicted RBP17.04■□□□□ 0.32
TUBA1B-201ENST00000332858 TPRNQ4KMQ1 711 aa17.04■□□□□ 0.32
TUBA1B-201ENST00000332858 FAM135BQ49AJ0 1406 aa17.03■□□□□ 0.32
TUBA1B-201ENST00000332858 WASLO00401 505 aaPredicted RBP17.03■□□□□ 0.32
TUBA1B-201ENST00000332858 RRS1Q15050 365 aaKnown RBP17.03■□□□□ 0.32
TUBA1B-201ENST00000332858 TBC1D2Q9BYX2 928 aa17.02■□□□□ 0.32
TUBA1B-201ENST00000332858 PLEKHG5O94827 1062 aa17.02■□□□□ 0.31
TUBA1B-201ENST00000332858 IL13P35225 146 aa17.02■□□□□ 0.31
TUBA1B-201ENST00000332858 PNNQ9H307 717 aaKnown RBP17.02■□□□□ 0.31
TUBA1B-201ENST00000332858 SMC5Q8IY18 1101 aa17.01■□□□□ 0.31
TUBA1B-201ENST00000332858 SETD1AO15047 1707 aaKnown RBP17.01■□□□□ 0.31
TUBA1B-201ENST00000332858 PPIP5K1Q6PFW1 1433 aa17.01■□□□□ 0.31
TUBA1B-201ENST00000332858 NFE2L2Q16236 605 aa17.01■□□□□ 0.31
TUBA1B-201ENST00000332858 DIP2BQ9P265 1576 aa17.01■□□□□ 0.31
TUBA1B-201ENST00000332858 SPRYD3Q8NCJ5 442 aa17.01■□□□□ 0.31
TUBA1B-201ENST00000332858 UPF2Q9HAU5 1272 aaKnown RBP17.01■□□□□ 0.31
TUBA1B-201ENST00000332858 VAMP4O75379 141 aa17■□□□□ 0.31
TUBA1B-201ENST00000332858 BECN1Q14457 450 aa17■□□□□ 0.31
TUBA1B-201ENST00000332858 KIF16BQ96L93 1317 aa17■□□□□ 0.31
TUBA1B-201ENST00000332858 ATP7BP35670 1465 aa17■□□□□ 0.31
TUBA1B-201ENST00000332858 RIMBP3CA6NJZ7 1639 aa17■□□□□ 0.31
TUBA1B-201ENST00000332858 RIMBP3BA6NNM3 1639 aa17■□□□□ 0.31
TUBA1B-201ENST00000332858 RIMBP3Q9UFD9 1639 aa17■□□□□ 0.31
TUBA1B-201ENST00000332858 FAM83GA6ND36 823 aa17■□□□□ 0.31
TUBA1B-201ENST00000332858 MFAP1P55081 439 aaKnown RBP17■□□□□ 0.31
TUBA1B-201ENST00000332858 CPSF1Q10570 1443 aaKnown RBP17■□□□□ 0.31
TUBA1B-201ENST00000332858 ZMYM3Q14202 1370 aa17■□□□□ 0.31
TUBA1B-201ENST00000332858 NUDT16Q96DE0 195 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms