RNA–Protein interactions for RNA: ENST00000331728.8

LIMK2-201, Transcript of LIM domain kinase 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIMK2, Length 3,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-201ENST00000331728 NCLP19338 710 aaKnown RBP10.88□□□□□ -0.67
LIMK2-201ENST00000331728 HDAC1Q13547 482 aaPredicted RBP10.88□□□□□ -0.67
LIMK2-201ENST00000331728 GRPEL1Q9HAV7 217 aa10.88□□□□□ -0.67
LIMK2-201ENST00000331728 PTMSP20962 102 aa10.88□□□□□ -0.67
LIMK2-201ENST00000331728 HSP90AA2PQ14568 343 aaPredicted RBP10.88□□□□□ -0.67
LIMK2-201ENST00000331728 ABCC11Q96J66 1382 aa10.87□□□□□ -0.67
LIMK2-201ENST00000331728 ABCA6Q8N139 1617 aa10.87□□□□□ -0.67
LIMK2-201ENST00000331728 CHD1LQ86WJ1 897 aa10.86□□□□□ -0.67
LIMK2-201ENST00000331728 PHF23Q9BUL5 403 aaPredicted RBP10.86□□□□□ -0.67
LIMK2-201ENST00000331728 PRKAR2BP31323 418 aa10.86□□□□□ -0.67
LIMK2-201ENST00000331728 C1orf115Q9H7X2 142 aa10.86□□□□□ -0.67
LIMK2-201ENST00000331728 IQSEC2Q5JU85 1478 aa10.86□□□□□ -0.67
LIMK2-201ENST00000331728 ZNF518AQ6AHZ1 1483 aa10.86□□□□□ -0.67
LIMK2-201ENST00000331728 UHRF1BP1LA0JNW5 1464 aa10.85□□□□□ -0.67
LIMK2-201ENST00000331728 ESPNB1AK53 854 aa10.85□□□□□ -0.67
LIMK2-201ENST00000331728 RRP9O43818 475 aaKnown RBP10.85□□□□□ -0.67
LIMK2-201ENST00000331728 PRAM1Q96QH2 718 aa10.85□□□□□ -0.67
LIMK2-201ENST00000331728 KIF1BO60333 1816 aa10.85□□□□□ -0.67
LIMK2-201ENST00000331728 HMOX1P09601 288 aa10.85□□□□□ -0.67
LIMK2-201ENST00000331728 CASC1Q6TDU7 716 aa10.85□□□□□ -0.67
LIMK2-201ENST00000331728 SHPRHQ149N8 1683 aa10.85□□□□□ -0.67
LIMK2-201ENST00000331728 SKOR2Q2VWA4 1001 aaPredicted RBP10.85□□□□□ -0.67
LIMK2-201ENST00000331728 ATAD2Q6PL18 1390 aa10.84□□□□□ -0.67
LIMK2-201ENST00000331728 SMC5Q8IY18 1101 aa10.84□□□□□ -0.67
LIMK2-201ENST00000331728 IL16Q14005 1332 aa10.84□□□□□ -0.67
LIMK2-201ENST00000331728 APBB1O00213 710 aa10.83□□□□□ -0.67
LIMK2-201ENST00000331728 PUS7Q96PZ0 661 aaKnown RBP10.83□□□□□ -0.67
LIMK2-201ENST00000331728 GCC1Q96CN9 775 aa10.83□□□□□ -0.68
LIMK2-201ENST00000331728 CFAP44Q96MT7 982 aa10.83□□□□□ -0.68
LIMK2-201ENST00000331728 GNAI1P63096 354 aa10.83□□□□□ -0.68
LIMK2-201ENST00000331728 ALDH1L2Q3SY69 923 aa10.83□□□□□ -0.68
LIMK2-201ENST00000331728 NCBP3Q53F19 620 aaKnown RBP10.83□□□□□ -0.68
LIMK2-201ENST00000331728 CIZ1Q9ULV3 898 aaPredicted RBP10.83□□□□□ -0.68
LIMK2-201ENST00000331728 CFAP65Q6ZU64 1925 aaKnown RBP10.83□□□□□ -0.68
LIMK2-201ENST00000331728 LMOD3Q0VAK6 560 aa10.82□□□□□ -0.68
LIMK2-201ENST00000331728 VSIG10Q8N0Z9 540 aa10.82□□□□□ -0.68
LIMK2-201ENST00000331728 EFCAB6Q5THR3 1501 aa10.82□□□□□ -0.68
LIMK2-201ENST00000331728 A0A1W2PP64 1363 aa10.82□□□□□ -0.68
LIMK2-201ENST00000331728 NUCB1Q02818 461 aa10.82□□□□□ -0.68
LIMK2-201ENST00000331728 FCHSD2O94868 740 aa10.82□□□□□ -0.68
LIMK2-201ENST00000331728 PKNOX2Q96KN3 472 aa10.82□□□□□ -0.68
LIMK2-201ENST00000331728 API5Q9BZZ5 524 aaKnown RBP10.82□□□□□ -0.68
LIMK2-201ENST00000331728 ZBTB40Q9NUA8 1239 aa10.82□□□□□ -0.68
LIMK2-201ENST00000331728 TRIM35Q9UPQ4 493 aa10.82□□□□□ -0.68
LIMK2-201ENST00000331728 DDX49Q9Y6V7 483 aaKnown RBP10.82□□□□□ -0.68
LIMK2-201ENST00000331728 ARAP3Q8WWN8 1544 aa10.82□□□□□ -0.68
LIMK2-201ENST00000331728 CDC45O75419 566 aa10.81□□□□□ -0.68
LIMK2-201ENST00000331728 TNPO1Q92973 898 aaKnown RBP10.81□□□□□ -0.68
LIMK2-201ENST00000331728 SNX21Q969T3 373 aa10.81□□□□□ -0.68
LIMK2-201ENST00000331728 THUMPD2Q9BTF0 503 aaKnown RBP10.81□□□□□ -0.68
LIMK2-201ENST00000331728 ZNF692Q9BU19 519 aaPredicted RBP10.81□□□□□ -0.68
LIMK2-201ENST00000331728 CABP1Q9NZU7 370 aa10.81□□□□□ -0.68
LIMK2-201ENST00000331728 ZNF428Q96B54 188 aa10.81□□□□□ -0.68
LIMK2-201ENST00000331728 NPATQ14207 1427 aa10.81□□□□□ -0.68
LIMK2-201ENST00000331728 FYB1O15117 783 aa10.81□□□□□ -0.68
LIMK2-201ENST00000331728 ASXL2Q76L83 1435 aa10.81□□□□□ -0.68
LIMK2-201ENST00000331728 K7ELQ4 463 aaPredicted RBP10.8□□□□□ -0.68
LIMK2-201ENST00000331728 RBM25P49756 843 aaKnown RBP10.8□□□□□ -0.68
LIMK2-201ENST00000331728 BMP2KLQ5H9B9 411 aa10.8□□□□□ -0.68
LIMK2-201ENST00000331728 CDK19Q9BWU1 502 aa10.8□□□□□ -0.68
LIMK2-201ENST00000331728 IDI1Q13907 227 aa10.8□□□□□ -0.68
LIMK2-201ENST00000331728 NCOA3Q9Y6Q9 1424 aa10.8□□□□□ -0.68
LIMK2-201ENST00000331728 HAP1P54257 671 aaPredicted RBP10.8□□□□□ -0.68
LIMK2-201ENST00000331728 RAPGEF3O95398 923 aa10.79□□□□□ -0.68
LIMK2-201ENST00000331728 SLC52A1Q9NWF4 448 aa10.79□□□□□ -0.68
LIMK2-201ENST00000331728 NEURL4Q96JN8 1562 aa10.79□□□□□ -0.68
LIMK2-201ENST00000331728 NFE2L2Q16236 605 aa10.79□□□□□ -0.68
LIMK2-201ENST00000331728 TWISTNBQ3B726 338 aaPredicted RBP10.79□□□□□ -0.68
LIMK2-201ENST00000331728 CD109Q6YHK3 1445 aa10.79□□□□□ -0.68
LIMK2-201ENST00000331728 MYO3AQ8NEV4 1616 aa10.79□□□□□ -0.68
LIMK2-201ENST00000331728 ERBB4Q15303 1308 aa10.78□□□□□ -0.68
LIMK2-201ENST00000331728 TPM2P07951 284 aa10.78□□□□□ -0.68
LIMK2-201ENST00000331728 MSNP26038 577 aaKnown RBP10.78□□□□□ -0.68
LIMK2-201ENST00000331728 DEPDC5O75140 1603 aa10.78□□□□□ -0.68
LIMK2-201ENST00000331728 DDIT3P35638 169 aa10.78□□□□□ -0.68
LIMK2-201ENST00000331728 RAB3GAP1Q15042 981 aa10.78□□□□□ -0.68
LIMK2-201ENST00000331728 TBC1D9Q6ZT07 1266 aa10.78□□□□□ -0.68
LIMK2-201ENST00000331728 INO80Q9ULG1 1556 aaPredicted RBP10.77□□□□□ -0.68
LIMK2-201ENST00000331728 PLEKHF1Q96S99 279 aa10.77□□□□□ -0.68
LIMK2-201ENST00000331728 QRICH2Q9H0J4 1663 aa10.77□□□□□ -0.69
LIMK2-201ENST00000331728 GAS2L3Q86XJ1 694 aa10.77□□□□□ -0.69
LIMK2-201ENST00000331728 SETBP1Q9Y6X0 1596 aa10.77□□□□□ -0.69
LIMK2-201ENST00000331728 ADGRB3O60242 1522 aa10.77□□□□□ -0.69
LIMK2-201ENST00000331728 ST18O60284 1047 aa10.77□□□□□ -0.69
LIMK2-201ENST00000331728 CCDC173Q0VFZ6 552 aa10.77□□□□□ -0.69
LIMK2-201ENST00000331728 COG3Q96JB2 828 aa10.77□□□□□ -0.69
LIMK2-201ENST00000331728 ESF1Q9H501 851 aaKnown RBP10.77□□□□□ -0.69
LIMK2-201ENST00000331728 FBLN1P23142 703 aa10.76□□□□□ -0.69
LIMK2-201ENST00000331728 NASPP49321 788 aaPredicted RBP10.76□□□□□ -0.69
LIMK2-201ENST00000331728 VWDEQ8N2E2 1590 aa10.76□□□□□ -0.69
LIMK2-201ENST00000331728 SSFA2P28290 1259 aa10.76□□□□□ -0.69
LIMK2-201ENST00000331728 RABEP1Q15276 862 aa10.76□□□□□ -0.69
LIMK2-201ENST00000331728 INTS3Q68E01 1043 aaKnown RBP10.76□□□□□ -0.69
LIMK2-201ENST00000331728 MCTP1Q6DN14 999 aa10.76□□□□□ -0.69
LIMK2-201ENST00000331728 ZMYND15Q9H091 742 aa10.76□□□□□ -0.69
LIMK2-201ENST00000331728 NUCB2P80303 420 aa10.75□□□□□ -0.69
LIMK2-201ENST00000331728 IFT57Q9NWB7 429 aa10.75□□□□□ -0.69
LIMK2-201ENST00000331728 USP32Q8NFA0 1604 aa10.75□□□□□ -0.69
LIMK2-201ENST00000331728 PPRC1Q5VV67 1664 aaKnown RBP10.75□□□□□ -0.69
LIMK2-201ENST00000331728 NRXN1Q9ULB1 1477 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 1281.1 ms