RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 SHPRHQ149N8 1683 aa17.89■□□□□ 0.45
ATP2C1-201ENST00000328560 NSD2O96028 1365 aa17.89■□□□□ 0.45
ATP2C1-201ENST00000328560 IQSEC2Q5JU85 1478 aa17.88■□□□□ 0.45
ATP2C1-201ENST00000328560 TRIM27P14373 513 aa17.88■□□□□ 0.45
ATP2C1-201ENST00000328560 NOB1Q9ULX3 412 aaKnown RBP17.88■□□□□ 0.45
ATP2C1-201ENST00000328560 BECN1Q14457 450 aa17.88■□□□□ 0.45
ATP2C1-201ENST00000328560 PLEKHF1Q96S99 279 aa17.86■□□□□ 0.45
ATP2C1-201ENST00000328560 HMOX1P09601 288 aa17.86■□□□□ 0.45
ATP2C1-201ENST00000328560 ABCC11Q96J66 1382 aa17.85■□□□□ 0.45
ATP2C1-201ENST00000328560 NEXMIFQ5QGS0 1516 aa17.85■□□□□ 0.45
ATP2C1-201ENST00000328560 ATAD2Q6PL18 1390 aa17.84■□□□□ 0.45
ATP2C1-201ENST00000328560 ELL2O00472 640 aaPredicted RBP17.84■□□□□ 0.45
ATP2C1-201ENST00000328560 CAMSAP1Q5T5Y3 1602 aa17.84■□□□□ 0.45
ATP2C1-201ENST00000328560 ATF7IPQ6VMQ6 1270 aa17.84■□□□□ 0.45
ATP2C1-201ENST00000328560 THUMPD2Q9BTF0 503 aaKnown RBP17.84■□□□□ 0.45
ATP2C1-201ENST00000328560 SIGLEC1Q9BZZ2 1709 aa17.84■□□□□ 0.45
ATP2C1-201ENST00000328560 PRKAR2BP31323 418 aa17.84■□□□□ 0.45
ATP2C1-201ENST00000328560 AAMPQ13685 434 aa17.84■□□□□ 0.45
ATP2C1-201ENST00000328560 MFAP1P55081 439 aaKnown RBP17.83■□□□□ 0.45
ATP2C1-201ENST00000328560 TMEM57Q8N5G2 664 aa17.83■□□□□ 0.45
ATP2C1-201ENST00000328560 ARHGAP31Q2M1Z3 1444 aa17.83■□□□□ 0.44
ATP2C1-201ENST00000328560 BRPF3Q9ULD4 1205 aa17.82■□□□□ 0.44
ATP2C1-201ENST00000328560 YTHDC2Q9H6S0 1430 aaKnown RBP17.82■□□□□ 0.44
ATP2C1-201ENST00000328560 DDX19BQ9UMR2 479 aa17.82■□□□□ 0.44
ATP2C1-201ENST00000328560 ZC3H13Q5T200 1668 aaKnown RBP17.81■□□□□ 0.44
ATP2C1-201ENST00000328560 DIP2CQ9Y2E4 1556 aa17.8■□□□□ 0.44
ATP2C1-201ENST00000328560 ARHGEF28Q8N1W1 1705 aaKnown RBP17.79■□□□□ 0.44
ATP2C1-201ENST00000328560 HDGFP51858 240 aaKnown RBP17.79■□□□□ 0.44
ATP2C1-201ENST00000328560 PNNQ9H307 717 aaKnown RBP17.79■□□□□ 0.44
ATP2C1-201ENST00000328560 CT47B1P0C2W7 299 aaPredicted RBP17.78■□□□□ 0.44
ATP2C1-201ENST00000328560 PPP6R1Q9UPN7 881 aa17.78■□□□□ 0.44
ATP2C1-201ENST00000328560 IPO8O15397 1037 aaKnown RBP17.78■□□□□ 0.44
ATP2C1-201ENST00000328560 ZRANB1Q9UGI0 708 aa17.78■□□□□ 0.44
ATP2C1-201ENST00000328560 EMILIN1Q9Y6C2 1016 aa17.78■□□□□ 0.44
ATP2C1-201ENST00000328560 TBC1D32Q96NH3 1257 aa17.78■□□□□ 0.44
ATP2C1-201ENST00000328560 PIK3C2BO00750 1634 aa17.77■□□□□ 0.44
ATP2C1-201ENST00000328560 PHACTR3Q96KR7 559 aa17.77■□□□□ 0.44
ATP2C1-201ENST00000328560 POLKQ9UBT6 870 aa17.77■□□□□ 0.44
ATP2C1-201ENST00000328560 ARXQ96QS3 562 aa17.77■□□□□ 0.44
ATP2C1-201ENST00000328560 LNPKQ9C0E8 428 aa17.77■□□□□ 0.44
ATP2C1-201ENST00000328560 TBC1D2Q9BYX2 928 aa17.76■□□□□ 0.43
ATP2C1-201ENST00000328560 NCKAP5LQ9HCH0 1330 aa17.76■□□□□ 0.43
ATP2C1-201ENST00000328560 FCHSD2O94868 740 aa17.75■□□□□ 0.43
ATP2C1-201ENST00000328560 NME9Q86XW9 330 aa17.75■□□□□ 0.43
ATP2C1-201ENST00000328560 C1orf115Q9H7X2 142 aa17.75■□□□□ 0.43
ATP2C1-201ENST00000328560 PTPRMP28827 1452 aa17.75■□□□□ 0.43
ATP2C1-201ENST00000328560 PLPPR3Q6T4P5 718 aa17.75■□□□□ 0.43
ATP2C1-201ENST00000328560 TXNDC2Q86VQ3 553 aa17.75■□□□□ 0.43
ATP2C1-201ENST00000328560 USP32Q8NFA0 1604 aa17.74■□□□□ 0.43
ATP2C1-201ENST00000328560 KIF16BQ96L93 1317 aa17.74■□□□□ 0.43
ATP2C1-201ENST00000328560 ZFYVE9O95405 1425 aa17.74■□□□□ 0.43
ATP2C1-201ENST00000328560 C22orf23Q9BZE7 217 aa17.74■□□□□ 0.43
ATP2C1-201ENST00000328560 NCBP3Q53F19 620 aaKnown RBP17.74■□□□□ 0.43
ATP2C1-201ENST00000328560 RRS1Q15050 365 aaKnown RBP17.73■□□□□ 0.43
ATP2C1-201ENST00000328560 NUTM2FA1L443 756 aa17.73■□□□□ 0.43
ATP2C1-201ENST00000328560 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.73■□□□□ 0.43
ATP2C1-201ENST00000328560 RSPH6AQ9H0K4 717 aa17.73■□□□□ 0.43
ATP2C1-201ENST00000328560 IL16Q14005 1332 aa17.72■□□□□ 0.43
ATP2C1-201ENST00000328560 HDAC1Q13547 482 aaPredicted RBP17.72■□□□□ 0.43
ATP2C1-201ENST00000328560 TSPYL6Q8N831 410 aa17.72■□□□□ 0.43
ATP2C1-201ENST00000328560 ZBTB40Q9NUA8 1239 aa17.72■□□□□ 0.43
ATP2C1-201ENST00000328560 CD163L1Q9NR16 1453 aa17.72■□□□□ 0.43
ATP2C1-201ENST00000328560 SOX12O15370 315 aa17.7■□□□□ 0.42
ATP2C1-201ENST00000328560 MYO5BQ9ULV0 1848 aa17.7■□□□□ 0.42
ATP2C1-201ENST00000328560 NFE2L2Q16236 605 aa17.7■□□□□ 0.42
ATP2C1-201ENST00000328560 ANKRD45Q5TZF3 282 aa17.7■□□□□ 0.42
ATP2C1-201ENST00000328560 COL3A1P02461 1466 aaPredicted RBP17.7■□□□□ 0.42
ATP2C1-201ENST00000328560 DCTN1Q14203 1278 aa17.7■□□□□ 0.42
ATP2C1-201ENST00000328560 FAM83GA6ND36 823 aa17.69■□□□□ 0.42
ATP2C1-201ENST00000328560 SMC5Q8IY18 1101 aa17.68■□□□□ 0.42
ATP2C1-201ENST00000328560 ADGRB2O60241 1585 aa17.68■□□□□ 0.42
ATP2C1-201ENST00000328560 NLRP1Q9C000 1473 aa17.68■□□□□ 0.42
ATP2C1-201ENST00000328560 COG3Q96JB2 828 aa17.67■□□□□ 0.42
ATP2C1-201ENST00000328560 ALKQ9UM73 1620 aa17.67■□□□□ 0.42
ATP2C1-201ENST00000328560 WASLO00401 505 aaPredicted RBP17.67■□□□□ 0.42
ATP2C1-201ENST00000328560 ALDH1L2Q3SY69 923 aa17.67■□□□□ 0.42
ATP2C1-201ENST00000328560 RIMS2Q9UQ26 1411 aa17.67■□□□□ 0.42
ATP2C1-201ENST00000328560 TMEM131LA2VDJ0 1609 aa17.66■□□□□ 0.42
ATP2C1-201ENST00000328560 VAMP4O75379 141 aa17.66■□□□□ 0.42
ATP2C1-201ENST00000328560 NUDT16Q96DE0 195 aaKnown RBP17.66■□□□□ 0.42
ATP2C1-201ENST00000328560 GZF1Q9H116 711 aaPredicted RBP17.66■□□□□ 0.42
ATP2C1-201ENST00000328560 PNPLA6Q8IY17 1366 aa17.66■□□□□ 0.42
ATP2C1-201ENST00000328560 MBIPQ9NS73 344 aa17.66■□□□□ 0.42
ATP2C1-201ENST00000328560 CHD1LQ86WJ1 897 aa17.66■□□□□ 0.42
ATP2C1-201ENST00000328560 RICTORQ6R327 1708 aa17.65■□□□□ 0.42
ATP2C1-201ENST00000328560 ARHGEF40Q8TER5 1519 aa17.65■□□□□ 0.42
ATP2C1-201ENST00000328560 GNAI1P63096 354 aa17.65■□□□□ 0.42
ATP2C1-201ENST00000328560 TWISTNBQ3B726 338 aaPredicted RBP17.65■□□□□ 0.42
ATP2C1-201ENST00000328560 ANTXR1Q9H6X2 564 aa17.65■□□□□ 0.42
ATP2C1-201ENST00000328560 TSPOAP1O95153 1857 aa17.64■□□□□ 0.42
ATP2C1-201ENST00000328560 CALD1Q05682 793 aaKnown RBP17.64■□□□□ 0.41
ATP2C1-201ENST00000328560 PREX1Q8TCU6 1659 aa17.64■□□□□ 0.41
ATP2C1-201ENST00000328560 NUCB1Q02818 461 aa17.64■□□□□ 0.41
ATP2C1-201ENST00000328560 HSCBQ8IWL3 235 aa17.64■□□□□ 0.41
ATP2C1-201ENST00000328560 IL13P35225 146 aa17.63■□□□□ 0.41
ATP2C1-201ENST00000328560 C8orf58Q8NAV2 365 aa17.63■□□□□ 0.41
ATP2C1-201ENST00000328560 MRPL50Q8N5N7 158 aaKnown RBP17.63■□□□□ 0.41
ATP2C1-201ENST00000328560 PPIP5K1Q6PFW1 1433 aa17.63■□□□□ 0.41
ATP2C1-201ENST00000328560 LRRC7Q96NW7 1537 aa17.62■□□□□ 0.41
ATP2C1-201ENST00000328560 ZBTB7BO15156 539 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms