RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 NKTRP30414 1462 aaKnown RBP23.62■■□□□ 1.37
RAB39A-201ENST00000320578 NRKQ7Z2Y5 1582 aa23.62■■□□□ 1.37
RAB39A-201ENST00000320578 RNF123Q5XPI4 1314 aa23.61■■□□□ 1.37
RAB39A-201ENST00000320578 TTC21BQ7Z4L5 1316 aa23.61■■□□□ 1.37
RAB39A-201ENST00000320578 FMN2Q9NZ56 1722 aa23.61■■□□□ 1.37
RAB39A-201ENST00000320578 COG3Q96JB2 828 aa23.61■■□□□ 1.37
RAB39A-201ENST00000320578 RUNDC1Q96C34 613 aa23.6■■□□□ 1.37
RAB39A-201ENST00000320578 TTC21AQ8NDW8 1320 aa23.6■■□□□ 1.37
RAB39A-201ENST00000320578 NME9Q86XW9 330 aa23.59■■□□□ 1.37
RAB39A-201ENST00000320578 ADGRL3Q9HAR2 1447 aa23.59■■□□□ 1.37
RAB39A-201ENST00000320578 POLKQ9UBT6 870 aa23.58■■□□□ 1.37
RAB39A-201ENST00000320578 SALL2Q9Y467 1007 aaPredicted RBP23.57■■□□□ 1.36
RAB39A-201ENST00000320578 APAF1O14727 1248 aa23.56■■□□□ 1.36
RAB39A-201ENST00000320578 CCDC146Q8IYE0 955 aa23.56■■□□□ 1.36
RAB39A-201ENST00000320578 SENP3-EIF4A1A0A087X0R7 540 aa23.54■■□□□ 1.36
RAB39A-201ENST00000320578 NALCNQ8IZF0 1738 aa23.54■■□□□ 1.36
RAB39A-201ENST00000320578 OVOS2A0A0J9YW53 1432 aa23.54■■□□□ 1.36
RAB39A-201ENST00000320578 OVOS2Q6IE36 1432 aa23.54■■□□□ 1.36
RAB39A-201ENST00000320578 NUTM2FA1L443 756 aa23.54■■□□□ 1.36
RAB39A-201ENST00000320578 DIAPH1O60610 1272 aaKnown RBP23.54■■□□□ 1.36
RAB39A-201ENST00000320578 GOLGA2Q08379 1002 aa23.54■■□□□ 1.36
RAB39A-201ENST00000320578 USP31Q70CQ4 1352 aa23.53■■□□□ 1.36
RAB39A-201ENST00000320578 IQSEC2Q5JU85 1478 aa23.53■■□□□ 1.36
RAB39A-201ENST00000320578 CDK12Q9NYV4 1490 aaPredicted RBP23.53■■□□□ 1.36
RAB39A-201ENST00000320578 NGDNQ8NEJ9 315 aaKnown RBP23.52■■□□□ 1.36
RAB39A-201ENST00000320578 PNNQ9H307 717 aaKnown RBP23.52■■□□□ 1.36
RAB39A-201ENST00000320578 U2AF1L5P0DN76 240 aaPredicted RBP23.52■■□□□ 1.36
RAB39A-201ENST00000320578 U2AF1Q01081 240 aaKnown RBP eCLIP23.52■■□□□ 1.36
RAB39A-201ENST00000320578 CCDC27Q2M243 656 aa23.52■■□□□ 1.36
RAB39A-201ENST00000320578 CDCA7LQ96GN5 454 aa23.52■■□□□ 1.36
RAB39A-201ENST00000320578 PHF23Q9BUL5 403 aaPredicted RBP23.51■■□□□ 1.35
RAB39A-201ENST00000320578 KDM4FA0A1W2PPD8 638 aa23.5■■□□□ 1.35
RAB39A-201ENST00000320578 TRMT2AQ8IZ69 625 aaKnown RBP23.5■■□□□ 1.35
RAB39A-201ENST00000320578 NCOA3Q9Y6Q9 1424 aa23.5■■□□□ 1.35
RAB39A-201ENST00000320578 ZRANB1Q9UGI0 708 aa23.49■■□□□ 1.35
RAB39A-201ENST00000320578 SLFN5Q08AF3 891 aa23.49■■□□□ 1.35
RAB39A-201ENST00000320578 PMFBP1Q8TBY8 1022 aa23.49■■□□□ 1.35
RAB39A-201ENST00000320578 RGPD8O14715 1765 aaPredicted RBP23.48■■□□□ 1.35
RAB39A-201ENST00000320578 TCP11L2Q8N4U5 519 aa23.47■■□□□ 1.35
RAB39A-201ENST00000320578 RCAN3Q9UKA8 241 aa23.47■■□□□ 1.35
RAB39A-201ENST00000320578 MAP2P11137 1827 aaKnown RBP23.47■■□□□ 1.35
RAB39A-201ENST00000320578 DUSP27Q5VZP5 1158 aa23.47■■□□□ 1.35
RAB39A-201ENST00000320578 PLEKHF1Q96S99 279 aa23.47■■□□□ 1.35
RAB39A-201ENST00000320578 E9PSI1 815 aa23.46■■□□□ 1.35
RAB39A-201ENST00000320578 FCHSD2O94868 740 aa23.46■■□□□ 1.35
RAB39A-201ENST00000320578 PHF8Q9UPP1 1060 aa23.46■■□□□ 1.35
RAB39A-201ENST00000320578 LRRC7Q96NW7 1537 aa23.46■■□□□ 1.35
RAB39A-201ENST00000320578 WWC1Q8IX03 1113 aa23.45■■□□□ 1.34
RAB39A-201ENST00000320578 U2SURPO15042 1029 aaKnown RBP23.44■■□□□ 1.34
RAB39A-201ENST00000320578 PROSER2Q86WR7 435 aaPredicted RBP23.44■■□□□ 1.34
RAB39A-201ENST00000320578 WDR63Q8IWG1 891 aa23.44■■□□□ 1.34
RAB39A-201ENST00000320578 EMILIN1Q9Y6C2 1016 aa23.44■■□□□ 1.34
RAB39A-201ENST00000320578 IL13P35225 146 aa23.43■■□□□ 1.34
RAB39A-201ENST00000320578 USP54Q70EL1 1684 aa23.43■■□□□ 1.34
RAB39A-201ENST00000320578 FBLN1P23142 703 aa23.41■■□□□ 1.34
RAB39A-201ENST00000320578 C19orf44Q9H6X5 657 aa23.41■■□□□ 1.34
RAB39A-201ENST00000320578 LMTK3Q96Q04 1460 aa23.41■■□□□ 1.34
RAB39A-201ENST00000320578 PPM1GO15355 546 aaPredicted RBP23.4■■□□□ 1.34
RAB39A-201ENST00000320578 DCCP43146 1447 aa23.39■■□□□ 1.34
RAB39A-201ENST00000320578 C14orf37Q86TY3 774 aa23.39■■□□□ 1.33
RAB39A-201ENST00000320578 RRP1P56182 461 aaKnown RBP23.38■■□□□ 1.33
RAB39A-201ENST00000320578 MAPK8IP3Q9UPT6 1336 aa23.38■■□□□ 1.33
RAB39A-201ENST00000320578 KIF24Q5T7B8 1368 aa23.38■■□□□ 1.33
RAB39A-201ENST00000320578 PIK3C2AO00443 1686 aa23.38■■□□□ 1.33
RAB39A-201ENST00000320578 RRS1Q15050 365 aaKnown RBP23.38■■□□□ 1.33
RAB39A-201ENST00000320578 RSPH6AQ9H0K4 717 aa23.38■■□□□ 1.33
RAB39A-201ENST00000320578 PPP4R2Q9NY27 417 aa23.37■■□□□ 1.33
RAB39A-201ENST00000320578 TMPOP42166 694 aaKnown RBP23.36■■□□□ 1.33
RAB39A-201ENST00000320578 RBM33Q96EV2 1170 aaKnown RBP23.36■■□□□ 1.33
RAB39A-201ENST00000320578 HSPA2P54652 639 aa23.35■■□□□ 1.33
RAB39A-201ENST00000320578 ESCO1Q5FWF5 840 aa23.35■■□□□ 1.33
RAB39A-201ENST00000320578 PELP1Q8IZL8 1130 aaKnown RBP23.35■■□□□ 1.33
RAB39A-201ENST00000320578 IRX6P78412 446 aaPredicted RBP23.34■■□□□ 1.33
RAB39A-201ENST00000320578 SPINK5Q9NQ38 1064 aaPredicted RBP23.34■■□□□ 1.33
RAB39A-201ENST00000320578 SBNO1A3KN83 1393 aa23.33■■□□□ 1.33
RAB39A-201ENST00000320578 NEFMP07197 916 aa23.33■■□□□ 1.33
RAB39A-201ENST00000320578 NLRP6P59044 892 aa23.33■■□□□ 1.32
RAB39A-201ENST00000320578 RRP7AQ9Y3A4 280 aaKnown RBP23.33■■□□□ 1.32
RAB39A-201ENST00000320578 TMEM94Q12767 1356 aa23.32■■□□□ 1.32
RAB39A-201ENST00000320578 IL16Q14005 1332 aa23.32■■□□□ 1.32
RAB39A-201ENST00000320578 C1orf167Q5SNV9 1468 aa23.32■■□□□ 1.32
RAB39A-201ENST00000320578 DMRT2Q9Y5R5 561 aa23.31■■□□□ 1.32
RAB39A-201ENST00000320578 FLT4P35916 1363 aa23.31■■□□□ 1.32
RAB39A-201ENST00000320578 PSME1Q06323 249 aa23.31■■□□□ 1.32
RAB39A-201ENST00000320578 NEUROD2Q15784 382 aa23.31■■□□□ 1.32
RAB39A-201ENST00000320578 ABTB2Q8N961 1025 aa23.31■■□□□ 1.32
RAB39A-201ENST00000320578 KIF1AQ12756 1690 aa23.3■■□□□ 1.32
RAB39A-201ENST00000320578 MAP3K19Q56UN5 1328 aa23.3■■□□□ 1.32
RAB39A-201ENST00000320578 PRKAR2BP31323 418 aa23.3■■□□□ 1.32
RAB39A-201ENST00000320578 STRCP1A6NGW2 1772 aa23.3■■□□□ 1.32
RAB39A-201ENST00000320578 EIF4A2Q14240 407 aaKnown RBP23.29■■□□□ 1.32
RAB39A-201ENST00000320578 PEAK1Q9H792 1746 aa23.29■■□□□ 1.32
RAB39A-201ENST00000320578 MYH16Q9H6N6 1097 aa23.29■■□□□ 1.32
RAB39A-201ENST00000320578 TRIM35Q9UPQ4 493 aa23.29■■□□□ 1.32
RAB39A-201ENST00000320578 MARF1Q9Y4F3 1742 aaKnown RBP23.28■■□□□ 1.32
RAB39A-201ENST00000320578 STRCQ7RTU9 1775 aa23.28■■□□□ 1.32
RAB39A-201ENST00000320578 MST1RQ04912 1400 aa23.28■■□□□ 1.32
RAB39A-201ENST00000320578 ATF3P18847 181 aa23.27■■□□□ 1.32
RAB39A-201ENST00000320578 RIPK4P57078 832 aa23.26■■□□□ 1.31
RAB39A-201ENST00000320578 NFE2L2Q16236 605 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms