RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 THEMISQ8N1K5 641 aaPredicted RBP20.76■□□□□ 0.91
SHISA2-201ENST00000319420 POLKQ9UBT6 870 aa20.76■□□□□ 0.91
SHISA2-201ENST00000319420 ADAMTS13Q76LX8 1427 aa20.76■□□□□ 0.91
SHISA2-201ENST00000319420 COG3Q96JB2 828 aa20.74■□□□□ 0.91
SHISA2-201ENST00000319420 LAS1LQ9Y4W2 734 aaKnown RBP20.73■□□□□ 0.91
SHISA2-201ENST00000319420 TRMT2AQ8IZ69 625 aaKnown RBP20.73■□□□□ 0.91
SHISA2-201ENST00000319420 UBR1Q8IWV7 1749 aa20.72■□□□□ 0.91
SHISA2-201ENST00000319420 ACEP12821 1306 aa20.71■□□□□ 0.91
SHISA2-201ENST00000319420 NKTRP30414 1462 aaKnown RBP20.71■□□□□ 0.91
SHISA2-201ENST00000319420 PRKAR2BP31323 418 aa20.71■□□□□ 0.91
SHISA2-201ENST00000319420 RIPK4P57078 832 aa20.71■□□□□ 0.91
SHISA2-201ENST00000319420 NUTM2GQ5VZR2 741 aa20.71■□□□□ 0.91
SHISA2-201ENST00000319420 CLUAP1Q96AJ1 413 aa20.71■□□□□ 0.91
SHISA2-201ENST00000319420 FANCIQ9NVI1 1328 aa20.71■□□□□ 0.91
SHISA2-201ENST00000319420 NLRP1Q9C000 1473 aa20.7■□□□□ 0.91
SHISA2-201ENST00000319420 KCNA6P17658 529 aa20.7■□□□□ 0.9
SHISA2-201ENST00000319420 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.7■□□□□ 0.9
SHISA2-201ENST00000319420 PANK1Q8TE04 598 aa20.7■□□□□ 0.9
SHISA2-201ENST00000319420 PTPRUQ92729 1446 aa20.7■□□□□ 0.9
SHISA2-201ENST00000319420 TMPOP42166 694 aaKnown RBP20.7■□□□□ 0.9
SHISA2-201ENST00000319420 PLEKHG1Q9ULL1 1385 aa20.7■□□□□ 0.9
SHISA2-201ENST00000319420 SHPRHQ149N8 1683 aa20.7■□□□□ 0.9
SHISA2-201ENST00000319420 SETD1AO15047 1707 aaKnown RBP20.7■□□□□ 0.9
SHISA2-201ENST00000319420 THUMPD2Q9BTF0 503 aaKnown RBP20.69■□□□□ 0.9
SHISA2-201ENST00000319420 TNNQ9UQP3 1299 aa20.69■□□□□ 0.9
SHISA2-201ENST00000319420 NGDNQ8NEJ9 315 aaKnown RBP20.68■□□□□ 0.9
SHISA2-201ENST00000319420 DLC1Q96QB1 1528 aa20.68■□□□□ 0.9
SHISA2-201ENST00000319420 COG6Q9Y2V7 657 aa20.67■□□□□ 0.9
SHISA2-201ENST00000319420 C14orf37Q86TY3 774 aa20.67■□□□□ 0.9
SHISA2-201ENST00000319420 PHACTR3Q96KR7 559 aa20.67■□□□□ 0.9
SHISA2-201ENST00000319420 PLEKHF1Q96S99 279 aa20.67■□□□□ 0.9
SHISA2-201ENST00000319420 C3P01024 1663 aa20.66■□□□□ 0.9
SHISA2-201ENST00000319420 USP32Q8NFA0 1604 aa20.66■□□□□ 0.9
SHISA2-201ENST00000319420 FAM135BQ49AJ0 1406 aa20.65■□□□□ 0.9
SHISA2-201ENST00000319420 NEFMP07197 916 aa20.65■□□□□ 0.9
SHISA2-201ENST00000319420 TRIM35Q9UPQ4 493 aa20.64■□□□□ 0.9
SHISA2-201ENST00000319420 CPS1P31327 1500 aa20.64■□□□□ 0.89
SHISA2-201ENST00000319420 PAK3O75914 559 aaPredicted RBP20.64■□□□□ 0.89
SHISA2-201ENST00000319420 CPSF1Q10570 1443 aaKnown RBP20.63■□□□□ 0.89
SHISA2-201ENST00000319420 EDC4Q6P2E9 1401 aaKnown RBP20.63■□□□□ 0.89
SHISA2-201ENST00000319420 FER1L4A9Z1Z3 1794 aa20.63■□□□□ 0.89
SHISA2-201ENST00000319420 ATP7BP35670 1465 aa20.63■□□□□ 0.89
SHISA2-201ENST00000319420 TBX22Q9Y458 520 aa20.63■□□□□ 0.89
SHISA2-201ENST00000319420 EXOSC9Q06265 439 aaKnown RBP20.63■□□□□ 0.89
SHISA2-201ENST00000319420 TTC21BQ7Z4L5 1316 aa20.62■□□□□ 0.89
SHISA2-201ENST00000319420 WDR63Q8IWG1 891 aa20.62■□□□□ 0.89
SHISA2-201ENST00000319420 RARSP54136 660 aaKnown RBP20.62■□□□□ 0.89
SHISA2-201ENST00000319420 NGEFQ8N5V2 710 aa20.62■□□□□ 0.89
SHISA2-201ENST00000319420 MYH16Q9H6N6 1097 aa20.62■□□□□ 0.89
SHISA2-201ENST00000319420 ZNF692Q9BU19 519 aaPredicted RBP20.61■□□□□ 0.89
SHISA2-201ENST00000319420 TECPR2O15040 1411 aa20.61■□□□□ 0.89
SHISA2-201ENST00000319420 ELL2O00472 640 aaPredicted RBP20.61■□□□□ 0.89
SHISA2-201ENST00000319420 NPM2Q86SE8 214 aaKnown RBP20.6■□□□□ 0.89
SHISA2-201ENST00000319420 SIRT1Q96EB6 747 aa20.6■□□□□ 0.89
SHISA2-201ENST00000319420 AEBP1Q8IUX7 1158 aa20.6■□□□□ 0.89
SHISA2-201ENST00000319420 TCERG1O14776 1098 aaKnown RBP20.6■□□□□ 0.89
SHISA2-201ENST00000319420 PHF23Q9BUL5 403 aaPredicted RBP20.6■□□□□ 0.89
SHISA2-201ENST00000319420 IQSEC2Q5JU85 1478 aa20.59■□□□□ 0.89
SHISA2-201ENST00000319420 HSP90AB2PQ58FF8 381 aa20.59■□□□□ 0.89
SHISA2-201ENST00000319420 RSPH6AQ9H0K4 717 aa20.59■□□□□ 0.89
SHISA2-201ENST00000319420 DCTN1Q14203 1278 aa20.59■□□□□ 0.89
SHISA2-201ENST00000319420 FAM83GA6ND36 823 aa20.58■□□□□ 0.89
SHISA2-201ENST00000319420 COL3A1P02461 1466 aaPredicted RBP20.58■□□□□ 0.89
SHISA2-201ENST00000319420 ANKLE2Q86XL3 938 aa20.58■□□□□ 0.89
SHISA2-201ENST00000319420 RGS3P49796 1198 aa20.58■□□□□ 0.88
SHISA2-201ENST00000319420 ZBTB7CA1YPR0 619 aa20.57■□□□□ 0.88
SHISA2-201ENST00000319420 FCHSD2O94868 740 aa20.57■□□□□ 0.88
SHISA2-201ENST00000319420 RLBP1P12271 317 aa20.57■□□□□ 0.88
SHISA2-201ENST00000319420 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.57■□□□□ 0.88
SHISA2-201ENST00000319420 IL13P35225 146 aa20.57■□□□□ 0.88
SHISA2-201ENST00000319420 SMC4Q9NTJ3 1288 aa20.56■□□□□ 0.88
SHISA2-201ENST00000319420 CCDC27Q2M243 656 aa20.56■□□□□ 0.88
SHISA2-201ENST00000319420 PNPLA6Q8IY17 1366 aa20.56■□□□□ 0.88
SHISA2-201ENST00000319420 SULT6B1Q6IMI4 303 aa20.56■□□□□ 0.88
SHISA2-201ENST00000319420 MED14O60244 1454 aa20.54■□□□□ 0.88
SHISA2-201ENST00000319420 NLRP6P59044 892 aa20.54■□□□□ 0.88
SHISA2-201ENST00000319420 XPCQ01831 940 aaPredicted RBP20.53■□□□□ 0.88
SHISA2-201ENST00000319420 LTV1Q96GA3 475 aaPredicted RBP20.53■□□□□ 0.88
SHISA2-201ENST00000319420 PLEKHG3A1L390 1219 aa20.53■□□□□ 0.88
SHISA2-201ENST00000319420 MAP2P11137 1827 aaKnown RBP20.53■□□□□ 0.88
SHISA2-201ENST00000319420 RIMS1Q86UR5 1692 aaKnown RBP20.52■□□□□ 0.88
SHISA2-201ENST00000319420 EIF4A2Q14240 407 aaKnown RBP20.52■□□□□ 0.88
SHISA2-201ENST00000319420 PNNQ9H307 717 aaKnown RBP20.52■□□□□ 0.88
SHISA2-201ENST00000319420 KIF20BQ96Q89 1820 aa20.52■□□□□ 0.88
SHISA2-201ENST00000319420 CDC42BPGQ6DT37 1551 aa20.52■□□□□ 0.88
SHISA2-201ENST00000319420 KDM2BQ8NHM5 1336 aa20.52■□□□□ 0.88
SHISA2-201ENST00000319420 FTSJ3Q8IY81 847 aaKnown RBP20.51■□□□□ 0.87
SHISA2-201ENST00000319420 SSH1Q8WYL5 1049 aa20.51■□□□□ 0.87
SHISA2-201ENST00000319420 LMOD2Q6P5Q4 547 aa20.51■□□□□ 0.87
SHISA2-201ENST00000319420 ARHGAP23Q9P227 1491 aa20.51■□□□□ 0.87
SHISA2-201ENST00000319420 PDE4AP27815 886 aa20.5■□□□□ 0.87
SHISA2-201ENST00000319420 USP6P35125 1406 aa20.5■□□□□ 0.87
SHISA2-201ENST00000319420 IGHDP01880 384 aa20.5■□□□□ 0.87
SHISA2-201ENST00000319420 AMPHP49418 695 aa20.5■□□□□ 0.87
SHISA2-201ENST00000319420 NFE2L2Q16236 605 aa20.5■□□□□ 0.87
SHISA2-201ENST00000319420 SLIT1O75093 1534 aa20.5■□□□□ 0.87
SHISA2-201ENST00000319420 ABTB2Q8N961 1025 aa20.49■□□□□ 0.87
SHISA2-201ENST00000319420 LRRC7Q96NW7 1537 aa20.49■□□□□ 0.87
SHISA2-201ENST00000319420 ESCO1Q5FWF5 840 aa20.48■□□□□ 0.87
SHISA2-201ENST00000319420 MAP3K19Q56UN5 1328 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms