RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 TERF2IPQ9NYB0 399 aa9.64□□□□□ -0.87
NPHP1-201ENST00000316534 ADAMTS8Q9UP79 889 aa9.64□□□□□ -0.87
NPHP1-201ENST00000316534 STAG3Q9UJ98 1225 aa9.63□□□□□ -0.87
NPHP1-201ENST00000316534 WAPLQ7Z5K2 1190 aa9.63□□□□□ -0.87
NPHP1-201ENST00000316534 NPHP4O75161 1426 aaPredicted RBP9.62□□□□□ -0.87
NPHP1-201ENST00000316534 ADGRL3Q9HAR2 1447 aa9.62□□□□□ -0.87
NPHP1-201ENST00000316534 SLIT3O75094 1523 aa9.62□□□□□ -0.87
NPHP1-201ENST00000316534 LMO7Q8WWI1 1683 aa9.62□□□□□ -0.87
NPHP1-201ENST00000316534 MINK1Q8N4C8 1332 aaPredicted RBP9.62□□□□□ -0.87
NPHP1-201ENST00000316534 TXNDC2Q86VQ3 553 aa9.62□□□□□ -0.87
NPHP1-201ENST00000316534 LTN1O94822 1766 aa9.61□□□□□ -0.87
NPHP1-201ENST00000316534 EID1Q9Y6B2 187 aa9.61□□□□□ -0.87
NPHP1-201ENST00000316534 NFAT5O94916 1531 aa9.61□□□□□ -0.87
NPHP1-201ENST00000316534 PLEKHF1Q96S99 279 aa9.61□□□□□ -0.87
NPHP1-201ENST00000316534 LMTK3Q96Q04 1460 aa9.61□□□□□ -0.87
NPHP1-201ENST00000316534 POGKQ9P215 609 aa9.61□□□□□ -0.87
NPHP1-201ENST00000316534 STK26Q9P289 416 aa9.6□□□□□ -0.87
NPHP1-201ENST00000316534 ZNF692Q9BU19 519 aaPredicted RBP9.6□□□□□ -0.87
NPHP1-201ENST00000316534 ABCC6O95255 1503 aa9.6□□□□□ -0.87
NPHP1-201ENST00000316534 DCCP43146 1447 aa9.6□□□□□ -0.87
NPHP1-201ENST00000316534 TRHP20396 242 aaPredicted RBP9.6□□□□□ -0.87
NPHP1-201ENST00000316534 KIF24Q5T7B8 1368 aa9.59□□□□□ -0.87
NPHP1-201ENST00000316534 NUDT16Q96DE0 195 aaKnown RBP9.59□□□□□ -0.87
NPHP1-201ENST00000316534 CABP1Q9NZU7 370 aa9.59□□□□□ -0.87
NPHP1-201ENST00000316534 CCDC61Q9Y6R9 512 aa9.59□□□□□ -0.87
NPHP1-201ENST00000316534 ADAMTS7Q9UKP4 1686 aa9.59□□□□□ -0.87
NPHP1-201ENST00000316534 HDGFL2Q7Z4V5 671 aaPredicted RBP9.59□□□□□ -0.87
NPHP1-201ENST00000316534 MORC1Q86VD1 984 aa9.59□□□□□ -0.87
NPHP1-201ENST00000316534 MED1Q15648 1581 aaPredicted RBP9.58□□□□□ -0.88
NPHP1-201ENST00000316534 NCAPD2Q15021 1401 aa9.58□□□□□ -0.88
NPHP1-201ENST00000316534 DUSP27Q5VZP5 1158 aa9.58□□□□□ -0.88
NPHP1-201ENST00000316534 N4BP2Q86UW6 1770 aaPredicted RBP9.58□□□□□ -0.88
NPHP1-201ENST00000316534 SRPK2P78362 688 aaKnown RBP9.58□□□□□ -0.88
NPHP1-201ENST00000316534 TTC21AQ8NDW8 1320 aa9.57□□□□□ -0.88
NPHP1-201ENST00000316534 SLFN5Q08AF3 891 aa9.57□□□□□ -0.88
NPHP1-201ENST00000316534 AMOTL2Q9Y2J4 779 aa9.57□□□□□ -0.88
NPHP1-201ENST00000316534 COL18A1P39060 1754 aa9.56□□□□□ -0.88
NPHP1-201ENST00000316534 FAM208AQ9UK61 1670 aaKnown RBP9.56□□□□□ -0.88
NPHP1-201ENST00000316534 MTHFSP49914 203 aa9.55□□□□□ -0.88
NPHP1-201ENST00000316534 RUNDC1Q96C34 613 aa9.55□□□□□ -0.88
NPHP1-201ENST00000316534 ABCA3Q99758 1704 aa9.55□□□□□ -0.88
NPHP1-201ENST00000316534 WDR43Q15061 677 aaKnown RBP eCLIP9.54□□□□□ -0.88
NPHP1-201ENST00000316534 ANKLE2Q86XL3 938 aa9.54□□□□□ -0.88
NPHP1-201ENST00000316534 WDR63Q8IWG1 891 aa9.54□□□□□ -0.88
NPHP1-201ENST00000316534 POLKQ9UBT6 870 aa9.54□□□□□ -0.88
NPHP1-201ENST00000316534 IL16Q14005 1332 aa9.54□□□□□ -0.88
NPHP1-201ENST00000316534 TTC21BQ7Z4L5 1316 aa9.54□□□□□ -0.88
NPHP1-201ENST00000316534 SIPA1L3O60292 1781 aaPredicted RBP9.53□□□□□ -0.88
NPHP1-201ENST00000316534 FKBP8Q14318 412 aa9.53□□□□□ -0.88
NPHP1-201ENST00000316534 ACEP12821 1306 aa9.52□□□□□ -0.89
NPHP1-201ENST00000316534 NHSL1Q5SYE7 1610 aa9.52□□□□□ -0.89
NPHP1-201ENST00000316534 IL13P35225 146 aa9.52□□□□□ -0.89
NPHP1-201ENST00000316534 RRP1P56182 461 aaKnown RBP9.52□□□□□ -0.89
NPHP1-201ENST00000316534 RTL1A6NKG5 1358 aa9.52□□□□□ -0.89
NPHP1-201ENST00000316534 KDRP35968 1356 aa9.52□□□□□ -0.89
NPHP1-201ENST00000316534 KCNA6P17658 529 aa9.52□□□□□ -0.89
NPHP1-201ENST00000316534 SAFB2Q14151 953 aaKnown RBP eCLIP9.52□□□□□ -0.89
NPHP1-201ENST00000316534 CFAP53Q96M91 514 aa9.52□□□□□ -0.89
NPHP1-201ENST00000316534 TSHZ2Q9NRE2 1034 aa9.52□□□□□ -0.89
NPHP1-201ENST00000316534 WWC1Q8IX03 1113 aa9.51□□□□□ -0.89
NPHP1-201ENST00000316534 PLEKHG2Q9H7P9 1386 aa9.51□□□□□ -0.89
NPHP1-201ENST00000316534 E9PSI1 815 aa9.51□□□□□ -0.89
NPHP1-201ENST00000316534 CDCA7LQ96GN5 454 aa9.51□□□□□ -0.89
NPHP1-201ENST00000316534 PPP4R2Q9NY27 417 aa9.51□□□□□ -0.89
NPHP1-201ENST00000316534 GOLGA2Q08379 1002 aa9.51□□□□□ -0.89
NPHP1-201ENST00000316534 SLC26A8Q96RN1 970 aa9.51□□□□□ -0.89
NPHP1-201ENST00000316534 RSPH6AQ9H0K4 717 aa9.51□□□□□ -0.89
NPHP1-201ENST00000316534 GGNBP2Q9H3C7 697 aa9.51□□□□□ -0.89
NPHP1-201ENST00000316534 ARHGEF10O15013 1369 aa9.51□□□□□ -0.89
NPHP1-201ENST00000316534 RCAN3Q9UKA8 241 aa9.5□□□□□ -0.89
NPHP1-201ENST00000316534 KDM3BQ7LBC6 1761 aa9.5□□□□□ -0.89
NPHP1-201ENST00000316534 SPINK5Q9NQ38 1064 aaPredicted RBP9.5□□□□□ -0.89
NPHP1-201ENST00000316534 FCHSD2O94868 740 aa9.49□□□□□ -0.89
NPHP1-201ENST00000316534 RGPD2P0DJD1 1756 aa9.49□□□□□ -0.89
NPHP1-201ENST00000316534 SBNO1A3KN83 1393 aa9.49□□□□□ -0.89
NPHP1-201ENST00000316534 NCKAP5LQ9HCH0 1330 aa9.49□□□□□ -0.89
NPHP1-201ENST00000316534 TRIM35Q9UPQ4 493 aa9.49□□□□□ -0.89
NPHP1-201ENST00000316534 APAF1O14727 1248 aa9.48□□□□□ -0.89
NPHP1-201ENST00000316534 CT47B1P0C2W7 299 aaPredicted RBP9.48□□□□□ -0.89
NPHP1-201ENST00000316534 NME9Q86XW9 330 aa9.48□□□□□ -0.89
NPHP1-201ENST00000316534 MYT1Q01538 1121 aa9.48□□□□□ -0.89
NPHP1-201ENST00000316534 DMRT2Q9Y5R5 561 aa9.48□□□□□ -0.89
NPHP1-201ENST00000316534 C1orf167Q5SNV9 1468 aa9.48□□□□□ -0.89
NPHP1-201ENST00000316534 PXDNQ92626 1479 aa9.48□□□□□ -0.89
NPHP1-201ENST00000316534 PKD1L3Q7Z443 1732 aa9.48□□□□□ -0.89
NPHP1-201ENST00000316534 PARP4Q9UKK3 1724 aaKnown RBP9.48□□□□□ -0.89
NPHP1-201ENST00000316534 NEFLP07196 543 aa9.47□□□□□ -0.89
NPHP1-201ENST00000316534 TCP11L2Q8N4U5 519 aa9.47□□□□□ -0.89
NPHP1-201ENST00000316534 USP19O94966 1318 aa9.47□□□□□ -0.89
NPHP1-201ENST00000316534 DIAPH1O60610 1272 aaKnown RBP9.47□□□□□ -0.89
NPHP1-201ENST00000316534 BRPF1P55201 1214 aaPredicted RBP9.47□□□□□ -0.89
NPHP1-201ENST00000316534 PNNQ9H307 717 aaKnown RBP9.47□□□□□ -0.89
NPHP1-201ENST00000316534 RGPD5Q99666 1765 aa9.46□□□□□ -0.89
NPHP1-201ENST00000316534 COL22A1Q8NFW1 1626 aaPredicted RBP9.46□□□□□ -0.9
NPHP1-201ENST00000316534 ZNF853P0CG23 659 aa9.45□□□□□ -0.9
NPHP1-201ENST00000316534 FLT4P35916 1363 aa9.45□□□□□ -0.9
NPHP1-201ENST00000316534 TMPOP42166 694 aaKnown RBP9.45□□□□□ -0.9
NPHP1-201ENST00000316534 COG3Q96JB2 828 aa9.45□□□□□ -0.9
NPHP1-201ENST00000316534 CCDC146Q8IYE0 955 aa9.45□□□□□ -0.9
NPHP1-201ENST00000316534 ZRANB1Q9UGI0 708 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms