RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 WWC1Q8IX03 1113 aa9.25□□□□□ -0.93
LYSMD3-201ENST00000315948 THUMPD2Q9BTF0 503 aaKnown RBP9.25□□□□□ -0.93
LYSMD3-201ENST00000315948 BCL2L13Q9BXK5 485 aa9.25□□□□□ -0.93
LYSMD3-201ENST00000315948 FAM135BQ49AJ0 1406 aa9.24□□□□□ -0.93
LYSMD3-201ENST00000315948 PHACTR3Q96KR7 559 aa9.24□□□□□ -0.93
LYSMD3-201ENST00000315948 RRP1P56182 461 aaKnown RBP9.24□□□□□ -0.93
LYSMD3-201ENST00000315948 GOLGA2Q08379 1002 aa9.24□□□□□ -0.93
LYSMD3-201ENST00000315948 TSR2Q969E8 191 aaKnown RBP9.24□□□□□ -0.93
LYSMD3-201ENST00000315948 DDX17Q92841 729 aaKnown RBP9.23□□□□□ -0.93
LYSMD3-201ENST00000315948 AEBP1Q8IUX7 1158 aa9.23□□□□□ -0.93
LYSMD3-201ENST00000315948 TNNQ9UQP3 1299 aa9.23□□□□□ -0.93
LYSMD3-201ENST00000315948 ADAMTSL3P82987 1691 aa9.23□□□□□ -0.93
LYSMD3-201ENST00000315948 PAK3O75914 559 aaPredicted RBP9.23□□□□□ -0.93
LYSMD3-201ENST00000315948 SLFN5Q08AF3 891 aa9.23□□□□□ -0.93
LYSMD3-201ENST00000315948 NGDNQ8NEJ9 315 aaKnown RBP9.23□□□□□ -0.93
LYSMD3-201ENST00000315948 TSHZ2Q9NRE2 1034 aa9.23□□□□□ -0.93
LYSMD3-201ENST00000315948 RGPD8O14715 1765 aaPredicted RBP9.22□□□□□ -0.93
LYSMD3-201ENST00000315948 C14orf37Q86TY3 774 aa9.22□□□□□ -0.93
LYSMD3-201ENST00000315948 RNF123Q5XPI4 1314 aa9.22□□□□□ -0.93
LYSMD3-201ENST00000315948 TTC21BQ7Z4L5 1316 aa9.22□□□□□ -0.93
LYSMD3-201ENST00000315948 HSP90AB2PQ58FF8 381 aa9.22□□□□□ -0.93
LYSMD3-201ENST00000315948 CFAP53Q96M91 514 aa9.22□□□□□ -0.93
LYSMD3-201ENST00000315948 RUNDC1Q96C34 613 aa9.22□□□□□ -0.93
LYSMD3-201ENST00000315948 COG3Q96JB2 828 aa9.22□□□□□ -0.93
LYSMD3-201ENST00000315948 PLEKHF1Q96S99 279 aa9.22□□□□□ -0.93
LYSMD3-201ENST00000315948 ORAI2Q96SN7 254 aa9.22□□□□□ -0.93
LYSMD3-201ENST00000315948 COL3A1P02461 1466 aaPredicted RBP9.21□□□□□ -0.93
LYSMD3-201ENST00000315948 DIAPH1O60610 1272 aaKnown RBP9.21□□□□□ -0.93
LYSMD3-201ENST00000315948 NINLQ9Y2I6 1382 aa9.21□□□□□ -0.93
LYSMD3-201ENST00000315948 PRKAR2BP31323 418 aa9.21□□□□□ -0.94
LYSMD3-201ENST00000315948 USP32Q8NFA0 1604 aa9.21□□□□□ -0.94
LYSMD3-201ENST00000315948 EDC4Q6P2E9 1401 aaKnown RBP9.2□□□□□ -0.94
LYSMD3-201ENST00000315948 FAM83GA6ND36 823 aa9.2□□□□□ -0.94
LYSMD3-201ENST00000315948 DCTN1Q14203 1278 aa9.2□□□□□ -0.94
LYSMD3-201ENST00000315948 CRBNQ96SW2 442 aa9.2□□□□□ -0.94
LYSMD3-201ENST00000315948 NSD2O96028 1365 aa9.2□□□□□ -0.94
LYSMD3-201ENST00000315948 ZBTB7CA1YPR0 619 aa9.2□□□□□ -0.94
LYSMD3-201ENST00000315948 SIRT1Q96EB6 747 aa9.2□□□□□ -0.94
LYSMD3-201ENST00000315948 PPP4R2Q9NY27 417 aa9.2□□□□□ -0.94
LYSMD3-201ENST00000315948 TRIM35Q9UPQ4 493 aa9.2□□□□□ -0.94
LYSMD3-201ENST00000315948 KDM4FA0A1W2PPD8 638 aa9.19□□□□□ -0.94
LYSMD3-201ENST00000315948 ESCO1Q5FWF5 840 aa9.19□□□□□ -0.94
LYSMD3-201ENST00000315948 CDC42BPGQ6DT37 1551 aa9.19□□□□□ -0.94
LYSMD3-201ENST00000315948 FOXO3O43524 673 aa9.19□□□□□ -0.94
LYSMD3-201ENST00000315948 PDE3BQ13370 1112 aa9.19□□□□□ -0.94
LYSMD3-201ENST00000315948 DIP2AQ14689 1571 aa9.19□□□□□ -0.94
LYSMD3-201ENST00000315948 KNDC1Q76NI1 1749 aa9.19□□□□□ -0.94
LYSMD3-201ENST00000315948 USP6P35125 1406 aa9.19□□□□□ -0.94
LYSMD3-201ENST00000315948 PLEKHG3A1L390 1219 aa9.18□□□□□ -0.94
LYSMD3-201ENST00000315948 TMPOP42166 694 aaKnown RBP9.18□□□□□ -0.94
LYSMD3-201ENST00000315948 LTV1Q96GA3 475 aaPredicted RBP9.18□□□□□ -0.94
LYSMD3-201ENST00000315948 LAS1LQ9Y4W2 734 aaKnown RBP9.18□□□□□ -0.94
LYSMD3-201ENST00000315948 IL13P35225 146 aa9.18□□□□□ -0.94
LYSMD3-201ENST00000315948 RIPK4P57078 832 aa9.18□□□□□ -0.94
LYSMD3-201ENST00000315948 TRMT2AQ8IZ69 625 aaKnown RBP9.18□□□□□ -0.94
LYSMD3-201ENST00000315948 MAP2P11137 1827 aaKnown RBP9.18□□□□□ -0.94
LYSMD3-201ENST00000315948 IQSEC2Q5JU85 1478 aa9.18□□□□□ -0.94
LYSMD3-201ENST00000315948 TCERG1O14776 1098 aaKnown RBP9.18□□□□□ -0.94
LYSMD3-201ENST00000315948 NLRP6P59044 892 aa9.18□□□□□ -0.94
LYSMD3-201ENST00000315948 LMOD2Q6P5Q4 547 aa9.18□□□□□ -0.94
LYSMD3-201ENST00000315948 RSPH6AQ9H0K4 717 aa9.18□□□□□ -0.94
LYSMD3-201ENST00000315948 CCDC136Q96JN2 1154 aa9.17□□□□□ -0.94
LYSMD3-201ENST00000315948 PNPLA6Q8IY17 1366 aa9.17□□□□□ -0.94
LYSMD3-201ENST00000315948 PTCH1Q13635 1447 aa9.17□□□□□ -0.94
LYSMD3-201ENST00000315948 EIF4A2Q14240 407 aaKnown RBP9.17□□□□□ -0.94
LYSMD3-201ENST00000315948 FRAT1Q92837 279 aaPredicted RBP9.17□□□□□ -0.94
LYSMD3-201ENST00000315948 INSRP06213 1382 aa9.17□□□□□ -0.94
LYSMD3-201ENST00000315948 KIF20BQ96Q89 1820 aa9.17□□□□□ -0.94
LYSMD3-201ENST00000315948 NPHP4O75161 1426 aaPredicted RBP9.17□□□□□ -0.94
LYSMD3-201ENST00000315948 MAP3K19Q56UN5 1328 aa9.17□□□□□ -0.94
LYSMD3-201ENST00000315948 ELL2O00472 640 aaPredicted RBP9.17□□□□□ -0.94
LYSMD3-201ENST00000315948 CLUAP1Q96AJ1 413 aa9.17□□□□□ -0.94
LYSMD3-201ENST00000315948 USHBP1Q8N6Y0 703 aa9.16□□□□□ -0.94
LYSMD3-201ENST00000315948 ABTB2Q8N961 1025 aa9.16□□□□□ -0.94
LYSMD3-201ENST00000315948 PANK1Q8TE04 598 aa9.16□□□□□ -0.94
LYSMD3-201ENST00000315948 XRN1Q8IZH2 1706 aaKnown RBP9.16□□□□□ -0.94
LYSMD3-201ENST00000315948 SULT6B1Q6IMI4 303 aa9.16□□□□□ -0.94
LYSMD3-201ENST00000315948 PHF23Q9BUL5 403 aaPredicted RBP9.16□□□□□ -0.94
LYSMD3-201ENST00000315948 PROSER2Q86WR7 435 aaPredicted RBP9.16□□□□□ -0.94
LYSMD3-201ENST00000315948 ZNF692Q9BU19 519 aaPredicted RBP9.16□□□□□ -0.94
LYSMD3-201ENST00000315948 MAPK8IP3Q9UPT6 1336 aa9.15□□□□□ -0.94
LYSMD3-201ENST00000315948 LRRC7Q96NW7 1537 aa9.15□□□□□ -0.94
LYSMD3-201ENST00000315948 E9PSI1 815 aa9.15□□□□□ -0.94
LYSMD3-201ENST00000315948 PHF8Q9UPP1 1060 aa9.15□□□□□ -0.95
LYSMD3-201ENST00000315948 SSH2Q76I76 1423 aa9.15□□□□□ -0.95
LYSMD3-201ENST00000315948 NALCNQ8IZF0 1738 aa9.14□□□□□ -0.95
LYSMD3-201ENST00000315948 MON2Q7Z3U7 1717 aa9.14□□□□□ -0.95
LYSMD3-201ENST00000315948 SETD1BQ9UPS6 1966 aaKnown RBP9.14□□□□□ -0.95
LYSMD3-201ENST00000315948 RLBP1P12271 317 aa9.14□□□□□ -0.95
LYSMD3-201ENST00000315948 EXOSC9Q06265 439 aaKnown RBP9.14□□□□□ -0.95
LYSMD3-201ENST00000315948 KRT24Q2M2I5 525 aa9.14□□□□□ -0.95
LYSMD3-201ENST00000315948 OVOS2A0A0J9YW53 1432 aa9.14□□□□□ -0.95
LYSMD3-201ENST00000315948 OVOS2Q6IE36 1432 aa9.14□□□□□ -0.95
LYSMD3-201ENST00000315948 ADGRB2O60241 1585 aa9.14□□□□□ -0.95
LYSMD3-201ENST00000315948 FANCIQ9NVI1 1328 aa9.14□□□□□ -0.95
LYSMD3-201ENST00000315948 MIS18AQ9NYP9 233 aa9.14□□□□□ -0.95
LYSMD3-201ENST00000315948 TOPAZ1Q8N9V7 1692 aa9.13□□□□□ -0.95
LYSMD3-201ENST00000315948 ANKRD26Q9UPS8 1709 aa9.13□□□□□ -0.95
LYSMD3-201ENST00000315948 MCM10Q7L590 875 aa9.13□□□□□ -0.95
LYSMD3-201ENST00000315948 ITSN1Q15811 1721 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms