RNA–Protein interactions for RNA: ENST00000314282.7

MRPL48-202, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 1 (best) BASIC

Gene MRPL48, Length 1,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-202ENST00000314282 HNRNPUQ00839 825 aaKnown RBP eCLIP13.08□□□□□ -0.32
MRPL48-202ENST00000314282 WDR70Q9NW82 654 aa13.08□□□□□ -0.32
MRPL48-202ENST00000314282 ROBO2Q9HCK4 1378 aa13.08□□□□□ -0.32
MRPL48-202ENST00000314282 WASLO00401 505 aaPredicted RBP13.07□□□□□ -0.32
MRPL48-202ENST00000314282 BRD4O60885 1362 aaPredicted RBP13.07□□□□□ -0.32
MRPL48-202ENST00000314282 PNISRQ8TF01 805 aaKnown RBP13.07□□□□□ -0.32
MRPL48-202ENST00000314282 CABP1Q9NZU7 370 aa13.07□□□□□ -0.32
MRPL48-202ENST00000314282 FAM135BQ49AJ0 1406 aa13.07□□□□□ -0.32
MRPL48-202ENST00000314282 ATAD2Q6PL18 1390 aa13.06□□□□□ -0.32
MRPL48-202ENST00000314282 PTPRUQ92729 1446 aa13.06□□□□□ -0.32
MRPL48-202ENST00000314282 TERF2IPQ9NYB0 399 aa13.06□□□□□ -0.32
MRPL48-202ENST00000314282 TECPR2O15040 1411 aa13.06□□□□□ -0.32
MRPL48-202ENST00000314282 IL27Q8NEV9 243 aa13.05□□□□□ -0.32
MRPL48-202ENST00000314282 NPC1L1Q9UHC9 1359 aa13.05□□□□□ -0.32
MRPL48-202ENST00000314282 NSD3Q9BZ95 1437 aa13.05□□□□□ -0.32
MRPL48-202ENST00000314282 ZMYND10O75800 440 aa13.05□□□□□ -0.32
MRPL48-202ENST00000314282 PPP2R1AP30153 589 aa13.05□□□□□ -0.32
MRPL48-202ENST00000314282 POLA2Q14181 598 aa13.05□□□□□ -0.32
MRPL48-202ENST00000314282 GPBP1L1Q9HC44 474 aaPredicted RBP13.05□□□□□ -0.32
MRPL48-202ENST00000314282 ZNF142P52746 1687 aaPredicted RBP13.04□□□□□ -0.32
MRPL48-202ENST00000314282 MYT1Q01538 1121 aa13.04□□□□□ -0.32
MRPL48-202ENST00000314282 CADPS2Q86UW7 1296 aa13.04□□□□□ -0.32
MRPL48-202ENST00000314282 ANKRD36BQ8N2N9 1353 aa13.04□□□□□ -0.32
MRPL48-202ENST00000314282 NINLQ9Y2I6 1382 aa13.04□□□□□ -0.32
MRPL48-202ENST00000314282 KNDC1Q76NI1 1749 aa13.04□□□□□ -0.32
MRPL48-202ENST00000314282 HDGFL2Q7Z4V5 671 aaPredicted RBP13.03□□□□□ -0.32
MRPL48-202ENST00000314282 MORC1Q86VD1 984 aa13.03□□□□□ -0.32
MRPL48-202ENST00000314282 NUDT16Q96DE0 195 aaKnown RBP13.03□□□□□ -0.32
MRPL48-202ENST00000314282 CGNL1Q0VF96 1302 aa13.03□□□□□ -0.32
MRPL48-202ENST00000314282 NCKAP5LQ9HCH0 1330 aa13.03□□□□□ -0.32
MRPL48-202ENST00000314282 CPS1P31327 1500 aa13.03□□□□□ -0.32
MRPL48-202ENST00000314282 KCNA6P17658 529 aa13.02□□□□□ -0.32
MRPL48-202ENST00000314282 TNNT2P45379 298 aaPredicted RBP13.02□□□□□ -0.32
MRPL48-202ENST00000314282 NUTM2FA1L443 756 aa13.01□□□□□ -0.33
MRPL48-202ENST00000314282 ZBTB47Q9UFB7 747 aaPredicted RBP13.01□□□□□ -0.33
MRPL48-202ENST00000314282 A0A1W2PP64 1363 aa13.01□□□□□ -0.33
MRPL48-202ENST00000314282 CCDC61Q9Y6R9 512 aa13.01□□□□□ -0.33
MRPL48-202ENST00000314282 DIP2AQ14689 1571 aa13.01□□□□□ -0.33
MRPL48-202ENST00000314282 KDM4FA0A1W2PPD8 638 aa13□□□□□ -0.33
MRPL48-202ENST00000314282 RYDENQ9NUL5 291 aaKnown RBP13□□□□□ -0.33
MRPL48-202ENST00000314282 PIK3R4Q99570 1358 aa13□□□□□ -0.33
MRPL48-202ENST00000314282 IGSF3O75054 1194 aa13□□□□□ -0.33
MRPL48-202ENST00000314282 MKRN3Q13064 507 aaKnown RBP13□□□□□ -0.33
MRPL48-202ENST00000314282 NPHP4O75161 1426 aaPredicted RBP12.99□□□□□ -0.33
MRPL48-202ENST00000314282 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.99□□□□□ -0.33
MRPL48-202ENST00000314282 SENP3-EIF4A1A0A087X0R7 540 aa12.98□□□□□ -0.33
MRPL48-202ENST00000314282 PPIP5K1Q6PFW1 1433 aa12.98□□□□□ -0.33
MRPL48-202ENST00000314282 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.98□□□□□ -0.33
MRPL48-202ENST00000314282 GGNBP2Q9H3C7 697 aa12.98□□□□□ -0.33
MRPL48-202ENST00000314282 PRR36Q9H6K5 1346 aa12.97□□□□□ -0.33
MRPL48-202ENST00000314282 FYB1O15117 783 aa12.97□□□□□ -0.33
MRPL48-202ENST00000314282 KCTD17Q8N5Z5 321 aa12.97□□□□□ -0.33
MRPL48-202ENST00000314282 RBM33Q96EV2 1170 aaKnown RBP12.97□□□□□ -0.33
MRPL48-202ENST00000314282 CD163L1Q9NR16 1453 aa12.97□□□□□ -0.33
MRPL48-202ENST00000314282 SEMA3EO15041 775 aa12.96□□□□□ -0.33
MRPL48-202ENST00000314282 HSPA2P54652 639 aa12.96□□□□□ -0.33
MRPL48-202ENST00000314282 PTCH1Q13635 1447 aa12.96□□□□□ -0.33
MRPL48-202ENST00000314282 WDR43Q15061 677 aaKnown RBP eCLIP12.96□□□□□ -0.34
MRPL48-202ENST00000314282 TESPA1A2RU30 521 aaPredicted RBP12.95□□□□□ -0.34
MRPL48-202ENST00000314282 ZNF692Q9BU19 519 aaPredicted RBP12.95□□□□□ -0.34
MRPL48-202ENST00000314282 ADAMTS8Q9UP79 889 aa12.95□□□□□ -0.34
MRPL48-202ENST00000314282 CHD2O14647 1828 aaKnown RBP12.95□□□□□ -0.34
MRPL48-202ENST00000314282 NSD2O96028 1365 aa12.95□□□□□ -0.34
MRPL48-202ENST00000314282 GSE1Q14687 1217 aa12.94□□□□□ -0.34
MRPL48-202ENST00000314282 USP32Q8NFA0 1604 aa12.93□□□□□ -0.34
MRPL48-202ENST00000314282 XRN1Q8IZH2 1706 aaKnown RBP12.93□□□□□ -0.34
MRPL48-202ENST00000314282 ATP7BP35670 1465 aa12.93□□□□□ -0.34
MRPL48-202ENST00000314282 ZBED9Q6R2W3 1325 aa12.93□□□□□ -0.34
MRPL48-202ENST00000314282 MTHFSP49914 203 aa12.93□□□□□ -0.34
MRPL48-202ENST00000314282 ACEP12821 1306 aa12.93□□□□□ -0.34
MRPL48-202ENST00000314282 PLEKHG3A1L390 1219 aa12.92□□□□□ -0.34
MRPL48-202ENST00000314282 PMFBP1Q8TBY8 1022 aa12.92□□□□□ -0.34
MRPL48-202ENST00000314282 ARHGEF1Q92888 912 aaKnown RBP12.92□□□□□ -0.34
MRPL48-202ENST00000314282 SALL2Q9Y467 1007 aaPredicted RBP12.92□□□□□ -0.34
MRPL48-202ENST00000314282 STK24Q9Y6E0 443 aa12.92□□□□□ -0.34
MRPL48-202ENST00000314282 CPSF1Q10570 1443 aaKnown RBP12.92□□□□□ -0.34
MRPL48-202ENST00000314282 ADGRB2O60241 1585 aa12.92□□□□□ -0.34
MRPL48-202ENST00000314282 BCL11BQ9C0K0 894 aaPredicted RBP12.92□□□□□ -0.34
MRPL48-202ENST00000314282 PLEKHG5O94827 1062 aa12.91□□□□□ -0.34
MRPL48-202ENST00000314282 PROSER2Q86WR7 435 aaPredicted RBP12.91□□□□□ -0.34
MRPL48-202ENST00000314282 RAD21O60216 631 aa12.9□□□□□ -0.34
MRPL48-202ENST00000314282 BARGINQ6ZT62 677 aa12.9□□□□□ -0.34
MRPL48-202ENST00000314282 NME9Q86XW9 330 aa12.9□□□□□ -0.34
MRPL48-202ENST00000314282 NGDNQ8NEJ9 315 aaKnown RBP12.9□□□□□ -0.34
MRPL48-202ENST00000314282 CFAP53Q96M91 514 aa12.9□□□□□ -0.34
MRPL48-202ENST00000314282 CCDC82Q8N4S0 544 aa12.9□□□□□ -0.35
MRPL48-202ENST00000314282 KDM4CQ9H3R0 1056 aa12.9□□□□□ -0.35
MRPL48-202ENST00000314282 EDC4Q6P2E9 1401 aaKnown RBP12.9□□□□□ -0.35
MRPL48-202ENST00000314282 ZRANB1Q9UGI0 708 aa12.89□□□□□ -0.35
MRPL48-202ENST00000314282 POLR3AO14802 1390 aaPredicted RBP12.89□□□□□ -0.35
MRPL48-202ENST00000314282 CDC42BPGQ6DT37 1551 aa12.88□□□□□ -0.35
MRPL48-202ENST00000314282 RGPD8O14715 1765 aaPredicted RBP12.88□□□□□ -0.35
MRPL48-202ENST00000314282 FBLN1P23142 703 aa12.88□□□□□ -0.35
MRPL48-202ENST00000314282 COG3Q96JB2 828 aa12.88□□□□□ -0.35
MRPL48-202ENST00000314282 TTC21BQ7Z4L5 1316 aa12.87□□□□□ -0.35
MRPL48-202ENST00000314282 ITSN1Q15811 1721 aa12.87□□□□□ -0.35
MRPL48-202ENST00000314282 PPM1GO15355 546 aaPredicted RBP12.86□□□□□ -0.35
MRPL48-202ENST00000314282 CCDC146Q8IYE0 955 aa12.86□□□□□ -0.35
MRPL48-202ENST00000314282 RGS22Q8NE09 1264 aa12.86□□□□□ -0.35
MRPL48-202ENST00000314282 KIF20BQ96Q89 1820 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms