RNA–Protein interactions for RNA: ENST00000311481.10

RAB1B-201, Transcript of RAB1B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB1B, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1B-201ENST00000311481 CT47B1P0C2W7 299 aaPredicted RBP26.55■■□□□ 1.84
RAB1B-201ENST00000311481 FRAT1Q92837 279 aaPredicted RBP26.55■■□□□ 1.84
RAB1B-201ENST00000311481 PNPLA6Q8IY17 1366 aa26.54■■□□□ 1.84
RAB1B-201ENST00000311481 RGS3P49796 1198 aa26.53■■□□□ 1.84
RAB1B-201ENST00000311481 RIMS2Q9UQ26 1411 aa26.53■■□□□ 1.84
RAB1B-201ENST00000311481 TMPOP42166 694 aaKnown RBP26.51■■□□□ 1.83
RAB1B-201ENST00000311481 ATP7BP35670 1465 aa26.51■■□□□ 1.83
RAB1B-201ENST00000311481 MLECQ14165 292 aa26.5■■□□□ 1.83
RAB1B-201ENST00000311481 CDC42BPGQ6DT37 1551 aa26.5■■□□□ 1.83
RAB1B-201ENST00000311481 U2SURPO15042 1029 aaKnown RBP26.49■■□□□ 1.83
RAB1B-201ENST00000311481 IL16Q14005 1332 aa26.49■■□□□ 1.83
RAB1B-201ENST00000311481 MAPK8IP3Q9UPT6 1336 aa26.49■■□□□ 1.83
RAB1B-201ENST00000311481 RLBP1P12271 317 aa26.49■■□□□ 1.83
RAB1B-201ENST00000311481 DEKP35659 375 aaKnown RBP26.49■■□□□ 1.83
RAB1B-201ENST00000311481 PMFBP1Q8TBY8 1022 aa26.49■■□□□ 1.83
RAB1B-201ENST00000311481 CABP1Q9NZU7 370 aa26.49■■□□□ 1.83
RAB1B-201ENST00000311481 TRIM35Q9UPQ4 493 aa26.48■■□□□ 1.83
RAB1B-201ENST00000311481 RTL5Q5HYW3 569 aaPredicted RBP26.47■■□□□ 1.83
RAB1B-201ENST00000311481 DIAPH1O60610 1272 aaKnown RBP26.46■■□□□ 1.83
RAB1B-201ENST00000311481 PNNQ9H307 717 aaKnown RBP26.46■■□□□ 1.83
RAB1B-201ENST00000311481 TNNQ9UQP3 1299 aa26.46■■□□□ 1.83
RAB1B-201ENST00000311481 NRXN3Q9Y4C0 1643 aa26.45■■□□□ 1.83
RAB1B-201ENST00000311481 PPM1GO15355 546 aaPredicted RBP26.44■■□□□ 1.82
RAB1B-201ENST00000311481 BCL2L13Q9BXK5 485 aa26.44■■□□□ 1.82
RAB1B-201ENST00000311481 PCDHB15Q9Y5E8 787 aa26.43■■□□□ 1.82
RAB1B-201ENST00000311481 ZKSCAN2Q63HK3 967 aa26.43■■□□□ 1.82
RAB1B-201ENST00000311481 ZMYM3Q14202 1370 aa26.42■■□□□ 1.82
RAB1B-201ENST00000311481 WAPLQ7Z5K2 1190 aa26.41■■□□□ 1.82
RAB1B-201ENST00000311481 MVPQ14764 893 aaKnown RBP26.41■■□□□ 1.82
RAB1B-201ENST00000311481 TSR2Q969E8 191 aaKnown RBP26.41■■□□□ 1.82
RAB1B-201ENST00000311481 USP35Q9P2H5 1018 aa26.41■■□□□ 1.82
RAB1B-201ENST00000311481 EXOSC9Q06265 439 aaKnown RBP26.4■■□□□ 1.82
RAB1B-201ENST00000311481 KNDC1Q76NI1 1749 aa26.4■■□□□ 1.82
RAB1B-201ENST00000311481 LAS1LQ9Y4W2 734 aaKnown RBP26.39■■□□□ 1.82
RAB1B-201ENST00000311481 FCHSD2O94868 740 aa26.39■■□□□ 1.81
RAB1B-201ENST00000311481 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.39■■□□□ 1.81
RAB1B-201ENST00000311481 CPSF1Q10570 1443 aaKnown RBP26.38■■□□□ 1.81
RAB1B-201ENST00000311481 RIPK4P57078 832 aa26.38■■□□□ 1.81
RAB1B-201ENST00000311481 DZIP1LQ8IYY4 767 aaKnown RBP26.38■■□□□ 1.81
RAB1B-201ENST00000311481 MAP2P11137 1827 aaKnown RBP26.38■■□□□ 1.81
RAB1B-201ENST00000311481 LRRC7Q96NW7 1537 aa26.37■■□□□ 1.81
RAB1B-201ENST00000311481 RWDD1Q9H446 243 aaPredicted RBP26.37■■□□□ 1.81
RAB1B-201ENST00000311481 POLKQ9UBT6 870 aa26.36■■□□□ 1.81
RAB1B-201ENST00000311481 SIRT1Q96EB6 747 aa26.36■■□□□ 1.81
RAB1B-201ENST00000311481 FAM135BQ49AJ0 1406 aa26.35■■□□□ 1.81
RAB1B-201ENST00000311481 EDC4Q6P2E9 1401 aaKnown RBP26.35■■□□□ 1.81
RAB1B-201ENST00000311481 WASLO00401 505 aaPredicted RBP26.34■■□□□ 1.81
RAB1B-201ENST00000311481 SMC4Q9NTJ3 1288 aa26.34■■□□□ 1.81
RAB1B-201ENST00000311481 TECPR2O15040 1411 aa26.33■■□□□ 1.81
RAB1B-201ENST00000311481 METP08581 1390 aa26.33■■□□□ 1.81
RAB1B-201ENST00000311481 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.33■■□□□ 1.81
RAB1B-201ENST00000311481 SSH1Q8WYL5 1049 aa26.33■■□□□ 1.81
RAB1B-201ENST00000311481 RSPH6AQ9H0K4 717 aa26.33■■□□□ 1.81
RAB1B-201ENST00000311481 FTSJ3Q8IY81 847 aaKnown RBP26.32■■□□□ 1.8
RAB1B-201ENST00000311481 PPIP5K1Q6PFW1 1433 aa26.32■■□□□ 1.8
RAB1B-201ENST00000311481 USP19O94966 1318 aa26.32■■□□□ 1.8
RAB1B-201ENST00000311481 NEFMP07197 916 aa26.32■■□□□ 1.8
RAB1B-201ENST00000311481 PDZRN3Q9UPQ7 1066 aa26.32■■□□□ 1.8
RAB1B-201ENST00000311481 BCL11AQ9H165 835 aa26.31■■□□□ 1.8
RAB1B-201ENST00000311481 DAXXQ9UER7 740 aaPredicted RBP26.31■■□□□ 1.8
RAB1B-201ENST00000311481 MON2Q7Z3U7 1717 aa26.31■■□□□ 1.8
RAB1B-201ENST00000311481 TRIM27P14373 513 aa26.3■■□□□ 1.8
RAB1B-201ENST00000311481 CPS1P31327 1500 aa26.29■■□□□ 1.8
RAB1B-201ENST00000311481 ATF7IPQ6VMQ6 1270 aa26.29■■□□□ 1.8
RAB1B-201ENST00000311481 CDK12Q9NYV4 1490 aaPredicted RBP26.29■■□□□ 1.8
RAB1B-201ENST00000311481 AATKQ6ZMQ8 1374 aa26.28■■□□□ 1.8
RAB1B-201ENST00000311481 AKAP12Q02952 1782 aa26.28■■□□□ 1.8
RAB1B-201ENST00000311481 PRKAR2BP31323 418 aa26.27■■□□□ 1.8
RAB1B-201ENST00000311481 HDGFP51858 240 aaKnown RBP26.27■■□□□ 1.8
RAB1B-201ENST00000311481 DDX19BQ9UMR2 479 aa26.27■■□□□ 1.8
RAB1B-201ENST00000311481 SLC4A3P48751 1232 aa26.27■■□□□ 1.8
RAB1B-201ENST00000311481 ALDH1L2Q3SY69 923 aa26.27■■□□□ 1.8
RAB1B-201ENST00000311481 HDAC1Q13547 482 aaPredicted RBP26.25■■□□□ 1.79
RAB1B-201ENST00000311481 NUDT16Q96DE0 195 aaKnown RBP26.25■■□□□ 1.79
RAB1B-201ENST00000311481 NOB1Q9ULX3 412 aaKnown RBP26.25■■□□□ 1.79
RAB1B-201ENST00000311481 KIF16BQ96L93 1317 aa26.25■■□□□ 1.79
RAB1B-201ENST00000311481 FBLN1P23142 703 aa26.24■■□□□ 1.79
RAB1B-201ENST00000311481 NFE2L2Q16236 605 aa26.24■■□□□ 1.79
RAB1B-201ENST00000311481 TXNDC2Q86VQ3 553 aa26.24■■□□□ 1.79
RAB1B-201ENST00000311481 ZNF428Q96B54 188 aa26.24■■□□□ 1.79
RAB1B-201ENST00000311481 ESF1Q9H501 851 aaKnown RBP26.24■■□□□ 1.79
RAB1B-201ENST00000311481 ITSN1Q15811 1721 aa26.24■■□□□ 1.79
RAB1B-201ENST00000311481 IL13P35225 146 aa26.24■■□□□ 1.79
RAB1B-201ENST00000311481 TNRQ92752 1358 aa26.23■■□□□ 1.79
RAB1B-201ENST00000311481 C3P01024 1663 aa26.23■■□□□ 1.79
RAB1B-201ENST00000311481 IPO8O15397 1037 aaKnown RBP26.23■■□□□ 1.79
RAB1B-201ENST00000311481 SEC24BO95487 1268 aa26.23■■□□□ 1.79
RAB1B-201ENST00000311481 BRPF1P55201 1214 aaPredicted RBP26.23■■□□□ 1.79
RAB1B-201ENST00000311481 NME9Q86XW9 330 aa26.23■■□□□ 1.79
RAB1B-201ENST00000311481 UBR1Q8IWV7 1749 aa26.23■■□□□ 1.79
RAB1B-201ENST00000311481 CCDC61Q9Y6R9 512 aa26.22■■□□□ 1.79
RAB1B-201ENST00000311481 EMILIN1Q9Y6C2 1016 aa26.21■■□□□ 1.79
RAB1B-201ENST00000311481 CALD1Q05682 793 aaKnown RBP26.2■■□□□ 1.78
RAB1B-201ENST00000311481 ITPRIPQ8IWB1 547 aa26.2■■□□□ 1.78
RAB1B-201ENST00000311481 PHACTR3Q96KR7 559 aa26.2■■□□□ 1.78
RAB1B-201ENST00000311481 TMEM2Q9UHN6 1383 aa26.19■■□□□ 1.78
RAB1B-201ENST00000311481 TMEM57Q8N5G2 664 aa26.19■■□□□ 1.78
RAB1B-201ENST00000311481 COG3Q96JB2 828 aa26.17■■□□□ 1.78
RAB1B-201ENST00000311481 ZBTB40Q9NUA8 1239 aa26.17■■□□□ 1.78
RAB1B-201ENST00000311481 HMOX1P09601 288 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms