RNA–Protein interactions for RNA: ENST00000309602.4

LRFN4-201, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN4, Length 2,431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-201ENST00000309602 RGS3P49796 1198 aa25.54■■□□□ 1.68
LRFN4-201ENST00000309602 BCL2L13Q9BXK5 485 aa25.54■■□□□ 1.68
LRFN4-201ENST00000309602 KIF20BQ96Q89 1820 aa25.54■■□□□ 1.68
LRFN4-201ENST00000309602 TNNQ9UQP3 1299 aa25.53■■□□□ 1.68
LRFN4-201ENST00000309602 TMPOP42166 694 aaKnown RBP25.52■■□□□ 1.68
LRFN4-201ENST00000309602 C8orf34Q49A92 452 aa25.52■■□□□ 1.68
LRFN4-201ENST00000309602 NBR1Q14596 966 aa25.52■■□□□ 1.68
LRFN4-201ENST00000309602 FAM161AQ3B820 660 aa25.52■■□□□ 1.68
LRFN4-201ENST00000309602 PNPLA6Q8IY17 1366 aa25.51■■□□□ 1.67
LRFN4-201ENST00000309602 NRXN3Q9Y4C0 1643 aa25.51■■□□□ 1.67
LRFN4-201ENST00000309602 RLBP1P12271 317 aa25.51■■□□□ 1.67
LRFN4-201ENST00000309602 TRIM35Q9UPQ4 493 aa25.5■■□□□ 1.67
LRFN4-201ENST00000309602 DIAPH1O60610 1272 aaKnown RBP25.49■■□□□ 1.67
LRFN4-201ENST00000309602 MAPK8IP3Q9UPT6 1336 aa25.49■■□□□ 1.67
LRFN4-201ENST00000309602 ATP7BP35670 1465 aa25.49■■□□□ 1.67
LRFN4-201ENST00000309602 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.49■■□□□ 1.67
LRFN4-201ENST00000309602 TSR2Q969E8 191 aaKnown RBP25.49■■□□□ 1.67
LRFN4-201ENST00000309602 ZMYM3Q14202 1370 aa25.48■■□□□ 1.67
LRFN4-201ENST00000309602 METP08581 1390 aa25.47■■□□□ 1.67
LRFN4-201ENST00000309602 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.45■■□□□ 1.67
LRFN4-201ENST00000309602 FBLN1P23142 703 aa25.45■■□□□ 1.66
LRFN4-201ENST00000309602 ESF1Q9H501 851 aaKnown RBP25.45■■□□□ 1.66
LRFN4-201ENST00000309602 WASLO00401 505 aaPredicted RBP25.43■■□□□ 1.66
LRFN4-201ENST00000309602 EXOSC9Q06265 439 aaKnown RBP25.43■■□□□ 1.66
LRFN4-201ENST00000309602 POLKQ9UBT6 870 aa25.43■■□□□ 1.66
LRFN4-201ENST00000309602 CT47B1P0C2W7 299 aaPredicted RBP25.42■■□□□ 1.66
LRFN4-201ENST00000309602 RIPK4P57078 832 aa25.42■■□□□ 1.66
LRFN4-201ENST00000309602 AAMPQ13685 434 aa25.42■■□□□ 1.66
LRFN4-201ENST00000309602 TXNDC2Q86VQ3 553 aa25.42■■□□□ 1.66
LRFN4-201ENST00000309602 PCDHB15Q9Y5E8 787 aa25.42■■□□□ 1.66
LRFN4-201ENST00000309602 CDC42BPGQ6DT37 1551 aa25.41■■□□□ 1.66
LRFN4-201ENST00000309602 DDRGK1Q96HY6 314 aa25.41■■□□□ 1.66
LRFN4-201ENST00000309602 CPSF1Q10570 1443 aaKnown RBP25.41■■□□□ 1.66
LRFN4-201ENST00000309602 PPIP5K1Q6PFW1 1433 aa25.41■■□□□ 1.66
LRFN4-201ENST00000309602 IL16Q14005 1332 aa25.4■■□□□ 1.66
LRFN4-201ENST00000309602 PPM1GO15355 546 aaPredicted RBP25.4■■□□□ 1.66
LRFN4-201ENST00000309602 LRRC7Q96NW7 1537 aa25.39■■□□□ 1.66
LRFN4-201ENST00000309602 ZKSCAN2Q63HK3 967 aa25.39■■□□□ 1.66
LRFN4-201ENST00000309602 PNNQ9H307 717 aaKnown RBP25.39■■□□□ 1.66
LRFN4-201ENST00000309602 PMFBP1Q8TBY8 1022 aa25.38■■□□□ 1.65
LRFN4-201ENST00000309602 EDC4Q6P2E9 1401 aaKnown RBP25.38■■□□□ 1.65
LRFN4-201ENST00000309602 FCHSD2O94868 740 aa25.38■■□□□ 1.65
LRFN4-201ENST00000309602 TNRQ92752 1358 aa25.37■■□□□ 1.65
LRFN4-201ENST00000309602 RSPH6AQ9H0K4 717 aa25.37■■□□□ 1.65
LRFN4-201ENST00000309602 MVPQ14764 893 aaKnown RBP25.36■■□□□ 1.65
LRFN4-201ENST00000309602 SMC4Q9NTJ3 1288 aa25.36■■□□□ 1.65
LRFN4-201ENST00000309602 NME9Q86XW9 330 aa25.36■■□□□ 1.65
LRFN4-201ENST00000309602 KNDC1Q76NI1 1749 aa25.36■■□□□ 1.65
LRFN4-201ENST00000309602 TECPR2O15040 1411 aa25.36■■□□□ 1.65
LRFN4-201ENST00000309602 NUDT16Q96DE0 195 aaKnown RBP25.35■■□□□ 1.65
LRFN4-201ENST00000309602 MAP2P11137 1827 aaKnown RBP25.35■■□□□ 1.65
LRFN4-201ENST00000309602 FAM135BQ49AJ0 1406 aa25.35■■□□□ 1.65
LRFN4-201ENST00000309602 PRKAR2BP31323 418 aa25.35■■□□□ 1.65
LRFN4-201ENST00000309602 DZIP1LQ8IYY4 767 aaKnown RBP25.35■■□□□ 1.65
LRFN4-201ENST00000309602 SSH1Q8WYL5 1049 aa25.35■■□□□ 1.65
LRFN4-201ENST00000309602 NCKAP5LQ9HCH0 1330 aa25.35■■□□□ 1.65
LRFN4-201ENST00000309602 ZRANB1Q9UGI0 708 aa25.34■■□□□ 1.65
LRFN4-201ENST00000309602 LAS1LQ9Y4W2 734 aaKnown RBP25.34■■□□□ 1.65
LRFN4-201ENST00000309602 EMILIN1Q9Y6C2 1016 aa25.34■■□□□ 1.65
LRFN4-201ENST00000309602 HDGFP51858 240 aaKnown RBP25.33■■□□□ 1.65
LRFN4-201ENST00000309602 FTSJ3Q8IY81 847 aaKnown RBP25.33■■□□□ 1.65
LRFN4-201ENST00000309602 SIRT1Q96EB6 747 aa25.33■■□□□ 1.65
LRFN4-201ENST00000309602 CPS1P31327 1500 aa25.32■■□□□ 1.64
LRFN4-201ENST00000309602 TMEM2Q9UHN6 1383 aa25.31■■□□□ 1.64
LRFN4-201ENST00000309602 TRIM27P14373 513 aa25.31■■□□□ 1.64
LRFN4-201ENST00000309602 CCDC61Q9Y6R9 512 aa25.31■■□□□ 1.64
LRFN4-201ENST00000309602 VIRMAQ69YN4 1812 aaKnown RBP25.3■■□□□ 1.64
LRFN4-201ENST00000309602 UBR1Q8IWV7 1749 aa25.3■■□□□ 1.64
LRFN4-201ENST00000309602 HMOX1P09601 288 aa25.29■■□□□ 1.64
LRFN4-201ENST00000309602 PHACTR3Q96KR7 559 aa25.29■■□□□ 1.64
LRFN4-201ENST00000309602 DEKP35659 375 aaKnown RBP25.28■■□□□ 1.64
LRFN4-201ENST00000309602 RTL5Q5HYW3 569 aaPredicted RBP25.28■■□□□ 1.64
LRFN4-201ENST00000309602 RWDD1Q9H446 243 aaPredicted RBP25.28■■□□□ 1.64
LRFN4-201ENST00000309602 MON2Q7Z3U7 1717 aa25.28■■□□□ 1.64
LRFN4-201ENST00000309602 IL13P35225 146 aa25.28■■□□□ 1.64
LRFN4-201ENST00000309602 PDZRN3Q9UPQ7 1066 aa25.28■■□□□ 1.64
LRFN4-201ENST00000309602 ATF7IPQ6VMQ6 1270 aa25.27■■□□□ 1.64
LRFN4-201ENST00000309602 AATKQ6ZMQ8 1374 aa25.27■■□□□ 1.64
LRFN4-201ENST00000309602 CDK12Q9NYV4 1490 aaPredicted RBP25.27■■□□□ 1.64
LRFN4-201ENST00000309602 PRR36Q9H6K5 1346 aa25.27■■□□□ 1.64
LRFN4-201ENST00000309602 NEFMP07197 916 aa25.27■■□□□ 1.64
LRFN4-201ENST00000309602 SLC4A3P48751 1232 aa25.27■■□□□ 1.64
LRFN4-201ENST00000309602 NOB1Q9ULX3 412 aaKnown RBP25.27■■□□□ 1.64
LRFN4-201ENST00000309602 ROBO2Q9HCK4 1378 aa25.26■■□□□ 1.63
LRFN4-201ENST00000309602 NFE2L2Q16236 605 aa25.26■■□□□ 1.63
LRFN4-201ENST00000309602 ADAMTS13Q76LX8 1427 aa25.26■■□□□ 1.63
LRFN4-201ENST00000309602 COG3Q96JB2 828 aa25.25■■□□□ 1.63
LRFN4-201ENST00000309602 AKAP12Q02952 1782 aa25.24■■□□□ 1.63
LRFN4-201ENST00000309602 C3P01024 1663 aa25.23■■□□□ 1.63
LRFN4-201ENST00000309602 RRS1Q15050 365 aaKnown RBP25.23■■□□□ 1.63
LRFN4-201ENST00000309602 ITPRIPQ8IWB1 547 aa25.23■■□□□ 1.63
LRFN4-201ENST00000309602 USP19O94966 1318 aa25.23■■□□□ 1.63
LRFN4-201ENST00000309602 SEC24BO95487 1268 aa25.22■■□□□ 1.63
LRFN4-201ENST00000309602 THUMPD2Q9BTF0 503 aaKnown RBP25.22■■□□□ 1.63
LRFN4-201ENST00000309602 DDX19BQ9UMR2 479 aa25.22■■□□□ 1.63
LRFN4-201ENST00000309602 ITSN1Q15811 1721 aa25.22■■□□□ 1.63
LRFN4-201ENST00000309602 KIF16BQ96L93 1317 aa25.21■■□□□ 1.63
LRFN4-201ENST00000309602 ALDH1L2Q3SY69 923 aa25.21■■□□□ 1.63
LRFN4-201ENST00000309602 LTKP29376 864 aa25.2■■□□□ 1.62
LRFN4-201ENST00000309602 TMEM57Q8N5G2 664 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms