RNA–Protein interactions for RNA: ENST00000309033.4

UBXN2A-201, Transcript of UBX domain protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2A, Length 6,066 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-201ENST00000309033 FAM43AQ8N2R8 423 aa22.36■■□□□ 1.17
UBXN2A-201ENST00000309033 GNAI2P04899 355 aa22.36■■□□□ 1.17
UBXN2A-201ENST00000309033 NASPP49321 788 aaPredicted RBP22.36■■□□□ 1.17
UBXN2A-201ENST00000309033 TRAK2O60296 914 aa22.35■■□□□ 1.17
UBXN2A-201ENST00000309033 STRN4Q9NRL3 753 aa22.35■■□□□ 1.17
UBXN2A-201ENST00000309033 KLHL34Q8N239 644 aa22.35■■□□□ 1.17
UBXN2A-201ENST00000309033 ERBINQ96RT1 1412 aa22.35■■□□□ 1.17
UBXN2A-201ENST00000309033 GPS2Q13227 327 aa22.34■■□□□ 1.17
UBXN2A-201ENST00000309033 ZNF771Q7L3S4 317 aaPredicted RBP22.34■■□□□ 1.17
UBXN2A-201ENST00000309033 PNISRQ8TF01 805 aaKnown RBP22.34■■□□□ 1.17
UBXN2A-201ENST00000309033 PRPF40AO75400 957 aaKnown RBP22.34■■□□□ 1.17
UBXN2A-201ENST00000309033 PDE3AQ14432 1141 aa22.34■■□□□ 1.17
UBXN2A-201ENST00000309033 GCC1Q96CN9 775 aa22.33■■□□□ 1.17
UBXN2A-201ENST00000309033 SIL1Q9H173 461 aa22.33■■□□□ 1.17
UBXN2A-201ENST00000309033 HDGFL1Q5TGJ6 251 aa22.33■■□□□ 1.16
UBXN2A-201ENST00000309033 SDF4Q9BRK5 362 aa22.33■■□□□ 1.16
UBXN2A-201ENST00000309033 ATP2B1P20020 1258 aa22.32■■□□□ 1.16
UBXN2A-201ENST00000309033 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.32■■□□□ 1.16
UBXN2A-201ENST00000309033 VSIG10Q8N0Z9 540 aa22.32■■□□□ 1.16
UBXN2A-201ENST00000309033 PROSER2Q86WR7 435 aaPredicted RBP22.32■■□□□ 1.16
UBXN2A-201ENST00000309033 PDILTQ8N807 584 aa22.32■■□□□ 1.16
UBXN2A-201ENST00000309033 NAP1L1P55209 391 aaKnown RBP22.31■■□□□ 1.16
UBXN2A-201ENST00000309033 KIF6Q6ZMV9 814 aa22.31■■□□□ 1.16
UBXN2A-201ENST00000309033 RRS1Q15050 365 aaKnown RBP22.31■■□□□ 1.16
UBXN2A-201ENST00000309033 CCDC43Q96MW1 224 aaKnown RBP22.31■■□□□ 1.16
UBXN2A-201ENST00000309033 SMG6Q86US8 1419 aaKnown RBP22.31■■□□□ 1.16
UBXN2A-201ENST00000309033 EFCAB5A4FU69 1503 aa22.31■■□□□ 1.16
UBXN2A-201ENST00000309033 CEBPZQ03701 1054 aaKnown RBP22.31■■□□□ 1.16
UBXN2A-201ENST00000309033 MRE11P49959 708 aa22.3■■□□□ 1.16
UBXN2A-201ENST00000309033 TBC1D2BQ9UPU7 963 aa22.3■■□□□ 1.16
UBXN2A-201ENST00000309033 OLFM4Q6UX06 510 aa22.3■■□□□ 1.16
UBXN2A-201ENST00000309033 RRP12Q5JTH9 1297 aaKnown RBP22.3■■□□□ 1.16
UBXN2A-201ENST00000309033 DAPK1P53355 1430 aa22.3■■□□□ 1.16
UBXN2A-201ENST00000309033 BRMS1Q9HCU9 246 aa22.3■■□□□ 1.16
UBXN2A-201ENST00000309033 WDR97A6NE52 1622 aa22.29■■□□□ 1.16
UBXN2A-201ENST00000309033 TIAM1Q13009 1591 aa22.28■■□□□ 1.16
UBXN2A-201ENST00000309033 STK11IPQ8N1F8 1099 aa22.28■■□□□ 1.16
UBXN2A-201ENST00000309033 RABEP1Q15276 862 aa22.28■■□□□ 1.16
UBXN2A-201ENST00000309033 FIBPO43427 364 aa22.28■■□□□ 1.16
UBXN2A-201ENST00000309033 STK3Q13188 491 aa22.28■■□□□ 1.16
UBXN2A-201ENST00000309033 TTC39AQ5SRH9 613 aa22.28■■□□□ 1.16
UBXN2A-201ENST00000309033 R3HCC1Q9Y3T6 440 aaKnown RBP22.28■■□□□ 1.16
UBXN2A-201ENST00000309033 MYL6BP14649 208 aa22.28■■□□□ 1.16
UBXN2A-201ENST00000309033 PATL2C9JE40 543 aaKnown RBP22.27■■□□□ 1.16
UBXN2A-201ENST00000309033 HECW1Q76N89 1606 aa22.27■■□□□ 1.16
UBXN2A-201ENST00000309033 NAT10Q9H0A0 1025 aaKnown RBP22.27■■□□□ 1.16
UBXN2A-201ENST00000309033 TATP17735 454 aaPredicted RBP22.27■■□□□ 1.16
UBXN2A-201ENST00000309033 CCDC39Q9UFE4 941 aa22.27■■□□□ 1.15
UBXN2A-201ENST00000309033 LRRCC1Q9C099 1032 aa22.26■■□□□ 1.15
UBXN2A-201ENST00000309033 ATF7IPQ6VMQ6 1270 aa22.26■■□□□ 1.15
UBXN2A-201ENST00000309033 CNNM1Q9NRU3 951 aa22.26■■□□□ 1.15
UBXN2A-201ENST00000309033 TROQ12816 1431 aaPredicted RBP22.26■■□□□ 1.15
UBXN2A-201ENST00000309033 RAPGEF3O95398 923 aa22.26■■□□□ 1.15
UBXN2A-201ENST00000309033 XBP1P17861 261 aa22.26■■□□□ 1.15
UBXN2A-201ENST00000309033 MVPQ14764 893 aaKnown RBP22.26■■□□□ 1.15
UBXN2A-201ENST00000309033 ERC1Q8IUD2 1116 aa22.26■■□□□ 1.15
UBXN2A-201ENST00000309033 RTEL1-TNFRSF6BF6WH68 1400 aa22.26■■□□□ 1.15
UBXN2A-201ENST00000309033 MNS1Q8NEH6 495 aa22.26■■□□□ 1.15
UBXN2A-201ENST00000309033 ZNF530Q6P9A1 599 aaPredicted RBP22.25■■□□□ 1.15
UBXN2A-201ENST00000309033 WDR63Q8IWG1 891 aa22.25■■□□□ 1.15
UBXN2A-201ENST00000309033 DDX54Q8TDD1 881 aaKnown RBP22.25■■□□□ 1.15
UBXN2A-201ENST00000309033 FMNL2Q96PY5 1086 aa22.25■■□□□ 1.15
UBXN2A-201ENST00000309033 TRIM5Q9C035 493 aa22.24■■□□□ 1.15
UBXN2A-201ENST00000309033 CCT4P50991 539 aaKnown RBP22.24■■□□□ 1.15
UBXN2A-201ENST00000309033 SART3Q15020 963 aaKnown RBP22.24■■□□□ 1.15
UBXN2A-201ENST00000309033 TTLL5Q6EMB2 1281 aa22.24■■□□□ 1.15
UBXN2A-201ENST00000309033 HIP1O00291 1037 aa22.24■■□□□ 1.15
UBXN2A-201ENST00000309033 CABP4P57796 275 aa22.24■■□□□ 1.15
UBXN2A-201ENST00000309033 TSPY26PQ9H489 355 aa22.24■■□□□ 1.15
UBXN2A-201ENST00000309033 SNAPC4Q5SXM2 1469 aa22.24■■□□□ 1.15
UBXN2A-201ENST00000309033 PRXQ9BXM0 1461 aa22.24■■□□□ 1.15
UBXN2A-201ENST00000309033 MRC2Q9UBG0 1479 aa22.24■■□□□ 1.15
UBXN2A-201ENST00000309033 SLC26A8Q96RN1 970 aa22.24■■□□□ 1.15
UBXN2A-201ENST00000309033 IKQ13123 557 aaPredicted RBP22.23■■□□□ 1.15
UBXN2A-201ENST00000309033 ZNF692Q9BU19 519 aaPredicted RBP22.23■■□□□ 1.15
UBXN2A-201ENST00000309033 BACH2Q9BYV9 841 aa22.23■■□□□ 1.15
UBXN2A-201ENST00000309033 SRCIN1Q9C0H9 1055 aa22.23■■□□□ 1.15
UBXN2A-201ENST00000309033 TOP2BQ02880 1626 aa22.23■■□□□ 1.15
UBXN2A-201ENST00000309033 CDK13Q14004 1512 aaKnown RBP22.23■■□□□ 1.15
UBXN2A-201ENST00000309033 SMC2O95347 1197 aa22.22■■□□□ 1.15
UBXN2A-201ENST00000309033 SETQ01105 290 aaPredicted RBP22.22■■□□□ 1.15
UBXN2A-201ENST00000309033 CCDC158Q5M9N0 1113 aa22.22■■□□□ 1.15
UBXN2A-201ENST00000309033 SUPT6HQ7KZ85 1726 aaKnown RBP22.22■■□□□ 1.15
UBXN2A-201ENST00000309033 CHD1LQ86WJ1 897 aa22.22■■□□□ 1.15
UBXN2A-201ENST00000309033 BRPF3Q9ULD4 1205 aa22.22■■□□□ 1.15
UBXN2A-201ENST00000309033 TOPBP1Q92547 1522 aa22.21■■□□□ 1.15
UBXN2A-201ENST00000309033 PLEKHH2Q8IVE3 1493 aa22.21■■□□□ 1.15
UBXN2A-201ENST00000309033 KINO60870 393 aaKnown RBP22.21■■□□□ 1.15
UBXN2A-201ENST00000309033 MCM2P49736 904 aa22.2■■□□□ 1.14
UBXN2A-201ENST00000309033 XPCQ01831 940 aaPredicted RBP22.2■■□□□ 1.14
UBXN2A-201ENST00000309033 TOM1L2Q6ZVM7 507 aa22.2■■□□□ 1.14
UBXN2A-201ENST00000309033 POLA1P09884 1462 aaPredicted RBP22.2■■□□□ 1.14
UBXN2A-201ENST00000309033 CYP46A1Q9Y6A2 500 aa22.2■■□□□ 1.14
UBXN2A-201ENST00000309033 EPS15P42566 896 aa22.19■■□□□ 1.14
UBXN2A-201ENST00000309033 MBD3O95983 291 aa22.19■■□□□ 1.14
UBXN2A-201ENST00000309033 CWC22Q9HCG8 908 aaKnown RBP22.19■■□□□ 1.14
UBXN2A-201ENST00000309033 IFT140Q96RY7 1462 aa22.19■■□□□ 1.14
UBXN2A-201ENST00000309033 LETM1O95202 739 aaPredicted RBP22.19■■□□□ 1.14
UBXN2A-201ENST00000309033 NSD3Q9BZ95 1437 aa22.18■■□□□ 1.14
UBXN2A-201ENST00000309033 TEX35Q5T0J7 233 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms