RNA–Protein interactions for RNA: ENST00000308862.10

PIKFYVE-202, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best) BASIC

Gene PIKFYVE, Length 1,640 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-202ENST00000308862 TRPM3Q9HCF6 1732 aaPredicted RBP21.01■□□□□ 0.95
PIKFYVE-202ENST00000308862 TTC21BQ7Z4L5 1316 aa21■□□□□ 0.95
PIKFYVE-202ENST00000308862 SLAIN2Q9P270 581 aa21■□□□□ 0.95
PIKFYVE-202ENST00000308862 BRD4O60885 1362 aaPredicted RBP21■□□□□ 0.95
PIKFYVE-202ENST00000308862 TTC21AQ8NDW8 1320 aa20.99■□□□□ 0.95
PIKFYVE-202ENST00000308862 MYBBP1AQ9BQG0 1328 aaKnown RBP20.99■□□□□ 0.95
PIKFYVE-202ENST00000308862 FYB1O15117 783 aa20.99■□□□□ 0.95
PIKFYVE-202ENST00000308862 GGNBP2Q9H3C7 697 aa20.99■□□□□ 0.95
PIKFYVE-202ENST00000308862 IQSEC2Q5JU85 1478 aa20.98■□□□□ 0.95
PIKFYVE-202ENST00000308862 FOXO3O43524 673 aa20.98■□□□□ 0.95
PIKFYVE-202ENST00000308862 NME9Q86XW9 330 aa20.98■□□□□ 0.95
PIKFYVE-202ENST00000308862 USP54Q70EL1 1684 aa20.98■□□□□ 0.95
PIKFYVE-202ENST00000308862 BRINP3Q76B58 766 aa20.97■□□□□ 0.95
PIKFYVE-202ENST00000308862 NHSL1Q5SYE7 1610 aa20.97■□□□□ 0.95
PIKFYVE-202ENST00000308862 SOCS7O14512 581 aa20.96■□□□□ 0.95
PIKFYVE-202ENST00000308862 PSME1Q06323 249 aa20.96■□□□□ 0.95
PIKFYVE-202ENST00000308862 MORC1Q86VD1 984 aa20.96■□□□□ 0.95
PIKFYVE-202ENST00000308862 ROBO1Q9Y6N7 1651 aa20.96■□□□□ 0.95
PIKFYVE-202ENST00000308862 OVOS2A0A0J9YW53 1432 aa20.96■□□□□ 0.95
PIKFYVE-202ENST00000308862 OVOS2Q6IE36 1432 aa20.96■□□□□ 0.95
PIKFYVE-202ENST00000308862 NPHP3Q7Z494 1330 aa20.95■□□□□ 0.94
PIKFYVE-202ENST00000308862 CCER2I3L3R5 266 aa20.95■□□□□ 0.94
PIKFYVE-202ENST00000308862 MARF1Q9Y4F3 1742 aaKnown RBP20.95■□□□□ 0.94
PIKFYVE-202ENST00000308862 PXDNQ92626 1479 aa20.94■□□□□ 0.94
PIKFYVE-202ENST00000308862 XPCQ01831 940 aaPredicted RBP20.94■□□□□ 0.94
PIKFYVE-202ENST00000308862 ALS2Q96Q42 1657 aa20.93■□□□□ 0.94
PIKFYVE-202ENST00000308862 PAK3O75914 559 aaPredicted RBP20.93■□□□□ 0.94
PIKFYVE-202ENST00000308862 KRT28Q7Z3Y7 464 aa20.92■□□□□ 0.94
PIKFYVE-202ENST00000308862 COG3Q96JB2 828 aa20.92■□□□□ 0.94
PIKFYVE-202ENST00000308862 ZRANB1Q9UGI0 708 aa20.92■□□□□ 0.94
PIKFYVE-202ENST00000308862 PPP2R1AP30153 589 aa20.91■□□□□ 0.94
PIKFYVE-202ENST00000308862 NLRP13Q86W25 1043 aa20.91■□□□□ 0.94
PIKFYVE-202ENST00000308862 DDX17Q92841 729 aaKnown RBP20.91■□□□□ 0.94
PIKFYVE-202ENST00000308862 USP31Q70CQ4 1352 aa20.9■□□□□ 0.94
PIKFYVE-202ENST00000308862 TNNT2P45379 298 aaPredicted RBP20.9■□□□□ 0.94
PIKFYVE-202ENST00000308862 SBNO1A3KN83 1393 aa20.89■□□□□ 0.93
PIKFYVE-202ENST00000308862 AHDC1Q5TGY3 1603 aaPredicted RBP20.89■□□□□ 0.93
PIKFYVE-202ENST00000308862 TNS3Q68CZ2 1445 aa20.89■□□□□ 0.93
PIKFYVE-202ENST00000308862 ABTB2Q8N961 1025 aa20.88■□□□□ 0.93
PIKFYVE-202ENST00000308862 MRS2Q9HD23 443 aa20.88■□□□□ 0.93
PIKFYVE-202ENST00000308862 SCAF1Q9H7N4 1312 aaKnown RBP20.88■□□□□ 0.93
PIKFYVE-202ENST00000308862 CCDC184Q52MB2 194 aa20.87■□□□□ 0.93
PIKFYVE-202ENST00000308862 ILDR2Q71H61 639 aa20.87■□□□□ 0.93
PIKFYVE-202ENST00000308862 CERKQ8TCT0 537 aa20.87■□□□□ 0.93
PIKFYVE-202ENST00000308862 TOM1O60784 492 aa20.86■□□□□ 0.93
PIKFYVE-202ENST00000308862 NLRP6P59044 892 aa20.86■□□□□ 0.93
PIKFYVE-202ENST00000308862 NUTM2GQ5VZR2 741 aa20.85■□□□□ 0.93
PIKFYVE-202ENST00000308862 SOS2Q07890 1332 aaPredicted RBP20.85■□□□□ 0.93
PIKFYVE-202ENST00000308862 UBAP1LF5GYI3 381 aa20.84■□□□□ 0.93
PIKFYVE-202ENST00000308862 AATKQ6ZMQ8 1374 aa20.84■□□□□ 0.93
PIKFYVE-202ENST00000308862 SLIT3O75094 1523 aa20.83■□□□□ 0.93
PIKFYVE-202ENST00000308862 SMG6Q86US8 1419 aaKnown RBP20.83■□□□□ 0.92
PIKFYVE-202ENST00000308862 MED1Q15648 1581 aaPredicted RBP20.83■□□□□ 0.92
PIKFYVE-202ENST00000308862 PHRF1Q9P1Y6 1649 aaKnown RBP20.83■□□□□ 0.92
PIKFYVE-202ENST00000308862 MAP2P11137 1827 aaKnown RBP20.82■□□□□ 0.92
PIKFYVE-202ENST00000308862 LMOD2Q6P5Q4 547 aa20.82■□□□□ 0.92
PIKFYVE-202ENST00000308862 PHLPP1O60346 1717 aa20.82■□□□□ 0.92
PIKFYVE-202ENST00000308862 CRYBG1Q9Y4K1 1723 aa20.82■□□□□ 0.92
PIKFYVE-202ENST00000308862 SPATA31A3Q5VYP0 1347 aa20.82■□□□□ 0.92
PIKFYVE-202ENST00000308862 ARHGEF10O15013 1369 aa20.82■□□□□ 0.92
PIKFYVE-202ENST00000308862 NFAT5O94916 1531 aa20.81■□□□□ 0.92
PIKFYVE-202ENST00000308862 PIP4K2BP78356 416 aa20.8■□□□□ 0.92
PIKFYVE-202ENST00000308862 USP19O94966 1318 aa20.79■□□□□ 0.92
PIKFYVE-202ENST00000308862 MTHFSP49914 203 aa20.79■□□□□ 0.92
PIKFYVE-202ENST00000308862 COL16A1Q07092 1604 aaPredicted RBP20.79■□□□□ 0.92
PIKFYVE-202ENST00000308862 CDK12Q9NYV4 1490 aaPredicted RBP20.79■□□□□ 0.92
PIKFYVE-202ENST00000308862 SOX12O15370 315 aa20.78■□□□□ 0.92
PIKFYVE-202ENST00000308862 LTN1O94822 1766 aa20.78■□□□□ 0.92
PIKFYVE-202ENST00000308862 ABCA3Q99758 1704 aa20.78■□□□□ 0.92
PIKFYVE-202ENST00000308862 PEAK1Q9H792 1746 aa20.78■□□□□ 0.92
PIKFYVE-202ENST00000308862 SHPRHQ149N8 1683 aa20.78■□□□□ 0.92
PIKFYVE-202ENST00000308862 FBLN1P23142 703 aa20.78■□□□□ 0.92
PIKFYVE-202ENST00000308862 POLKQ9UBT6 870 aa20.77■□□□□ 0.92
PIKFYVE-202ENST00000308862 COL3A1P02461 1466 aaPredicted RBP20.77■□□□□ 0.92
PIKFYVE-202ENST00000308862 RRS1Q15050 365 aaKnown RBP20.76■□□□□ 0.91
PIKFYVE-202ENST00000308862 EMILIN1Q9Y6C2 1016 aa20.76■□□□□ 0.91
PIKFYVE-202ENST00000308862 CFAP53Q96M91 514 aa20.75■□□□□ 0.91
PIKFYVE-202ENST00000308862 PLEKHG5O94827 1062 aa20.74■□□□□ 0.91
PIKFYVE-202ENST00000308862 KCNH5Q8NCM2 988 aa20.74■□□□□ 0.91
PIKFYVE-202ENST00000308862 PPM1GO15355 546 aaPredicted RBP20.73■□□□□ 0.91
PIKFYVE-202ENST00000308862 COL22A1Q8NFW1 1626 aaPredicted RBP20.73■□□□□ 0.91
PIKFYVE-202ENST00000308862 MAP3K19Q56UN5 1328 aa20.72■□□□□ 0.91
PIKFYVE-202ENST00000308862 PNISRQ8TF01 805 aaKnown RBP20.72■□□□□ 0.91
PIKFYVE-202ENST00000308862 PNPLA6Q8IY17 1366 aa20.72■□□□□ 0.91
PIKFYVE-202ENST00000308862 FAM9BQ8IZU0 186 aa20.71■□□□□ 0.91
PIKFYVE-202ENST00000308862 GCP02774 474 aa20.71■□□□□ 0.91
PIKFYVE-202ENST00000308862 RTL1A6NKG5 1358 aa20.7■□□□□ 0.9
PIKFYVE-202ENST00000308862 INSRP06213 1382 aa20.7■□□□□ 0.9
PIKFYVE-202ENST00000308862 FLT4P35916 1363 aa20.7■□□□□ 0.9
PIKFYVE-202ENST00000308862 LRRC59Q96AG4 307 aaKnown RBP20.7■□□□□ 0.9
PIKFYVE-202ENST00000308862 KIF24Q5T7B8 1368 aa20.69■□□□□ 0.9
PIKFYVE-202ENST00000308862 WDR43Q15061 677 aaKnown RBP eCLIP20.68■□□□□ 0.9
PIKFYVE-202ENST00000308862 CABLES1Q8TDN4 633 aa20.67■□□□□ 0.9
PIKFYVE-202ENST00000308862 AMPHP49418 695 aa20.67■□□□□ 0.9
PIKFYVE-202ENST00000308862 DIAPH1O60610 1272 aaKnown RBP20.65■□□□□ 0.9
PIKFYVE-202ENST00000308862 YTHDC1Q96MU7 727 aaKnown RBP20.65■□□□□ 0.9
PIKFYVE-202ENST00000308862 ABCC6O95255 1503 aa20.65■□□□□ 0.9
PIKFYVE-202ENST00000308862 ZBTB7CA1YPR0 619 aa20.64■□□□□ 0.9
PIKFYVE-202ENST00000308862 HOXC9P31274 260 aa20.64■□□□□ 0.89
PIKFYVE-202ENST00000308862 ARHGEF25Q86VW2 580 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms