RNA–Protein interactions for RNA: ENST00000308783.9

KDM2A-201, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best) BASIC

Gene KDM2A, Length 3,666 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-201ENST00000308783 ROBO2Q9HCK4 1378 aa13.53□□□□□ -0.24
KDM2A-201ENST00000308783 BLMP54132 1417 aaPredicted RBP13.53□□□□□ -0.24
KDM2A-201ENST00000308783 SMG6Q86US8 1419 aaKnown RBP13.53□□□□□ -0.24
KDM2A-201ENST00000308783 ZFP91Q96JP5 570 aaPredicted RBP13.52□□□□□ -0.24
KDM2A-201ENST00000308783 PUS7Q96PZ0 661 aaKnown RBP13.52□□□□□ -0.24
KDM2A-201ENST00000308783 MTHFSP49914 203 aa13.52□□□□□ -0.25
KDM2A-201ENST00000308783 NLRP1Q9C000 1473 aa13.52□□□□□ -0.25
KDM2A-201ENST00000308783 B4GALNT3Q6L9W6 998 aa13.52□□□□□ -0.25
KDM2A-201ENST00000308783 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.52□□□□□ -0.25
KDM2A-201ENST00000308783 PNNQ9H307 717 aaKnown RBP13.52□□□□□ -0.25
KDM2A-201ENST00000308783 VGLL3A8MV65 326 aa13.51□□□□□ -0.25
KDM2A-201ENST00000308783 FYB1O15117 783 aa13.51□□□□□ -0.25
KDM2A-201ENST00000308783 ATAD2Q6PL18 1390 aa13.51□□□□□ -0.25
KDM2A-201ENST00000308783 WASLO00401 505 aaPredicted RBP13.5□□□□□ -0.25
KDM2A-201ENST00000308783 EID1Q9Y6B2 187 aa13.5□□□□□ -0.25
KDM2A-201ENST00000308783 PTPRUQ92729 1446 aa13.49□□□□□ -0.25
KDM2A-201ENST00000308783 MAPK8IP2Q13387 824 aaPredicted RBP13.49□□□□□ -0.25
KDM2A-201ENST00000308783 DLC1Q96QB1 1528 aa13.49□□□□□ -0.25
KDM2A-201ENST00000308783 PLEKHG1Q9ULL1 1385 aa13.49□□□□□ -0.25
KDM2A-201ENST00000308783 TERF2IPQ9NYB0 399 aa13.49□□□□□ -0.25
KDM2A-201ENST00000308783 ZHX1Q9UKY1 873 aaPredicted RBP13.49□□□□□ -0.25
KDM2A-201ENST00000308783 RIMS1Q86UR5 1692 aaKnown RBP13.49□□□□□ -0.25
KDM2A-201ENST00000308783 APAF1O14727 1248 aa13.49□□□□□ -0.25
KDM2A-201ENST00000308783 GTF2E1P29083 439 aaPredicted RBP13.49□□□□□ -0.25
KDM2A-201ENST00000308783 SAMD1Q6SPF0 538 aaPredicted RBP13.48□□□□□ -0.25
KDM2A-201ENST00000308783 THEMISQ8N1K5 641 aaPredicted RBP13.48□□□□□ -0.25
KDM2A-201ENST00000308783 FRAT1Q92837 279 aaPredicted RBP13.48□□□□□ -0.25
KDM2A-201ENST00000308783 NUDT16Q96DE0 195 aaKnown RBP13.48□□□□□ -0.25
KDM2A-201ENST00000308783 ZRANB1Q9UGI0 708 aa13.48□□□□□ -0.25
KDM2A-201ENST00000308783 AMOTL2Q9Y2J4 779 aa13.48□□□□□ -0.25
KDM2A-201ENST00000308783 PRR36Q9H6K5 1346 aa13.47□□□□□ -0.25
KDM2A-201ENST00000308783 HDGFL2Q7Z4V5 671 aaPredicted RBP13.46□□□□□ -0.25
KDM2A-201ENST00000308783 RBM33Q96EV2 1170 aaKnown RBP13.46□□□□□ -0.25
KDM2A-201ENST00000308783 HOMEZQ8IX15 550 aa13.46□□□□□ -0.25
KDM2A-201ENST00000308783 IPO4Q8TEX9 1081 aaKnown RBP13.45□□□□□ -0.26
KDM2A-201ENST00000308783 PPIP5K1Q6PFW1 1433 aa13.45□□□□□ -0.26
KDM2A-201ENST00000308783 DMRT2Q9Y5R5 561 aa13.45□□□□□ -0.26
KDM2A-201ENST00000308783 POLR3AO14802 1390 aaPredicted RBP13.45□□□□□ -0.26
KDM2A-201ENST00000308783 TECPR2O15040 1411 aa13.45□□□□□ -0.26
KDM2A-201ENST00000308783 NEUROD2Q15784 382 aa13.45□□□□□ -0.26
KDM2A-201ENST00000308783 SPINK5Q9NQ38 1064 aaPredicted RBP13.45□□□□□ -0.26
KDM2A-201ENST00000308783 ARHGAP23Q9P227 1491 aa13.45□□□□□ -0.26
KDM2A-201ENST00000308783 RRP7AQ9Y3A4 280 aaKnown RBP13.45□□□□□ -0.26
KDM2A-201ENST00000308783 USP32Q8NFA0 1604 aa13.44□□□□□ -0.26
KDM2A-201ENST00000308783 SLIT1O75093 1534 aa13.44□□□□□ -0.26
KDM2A-201ENST00000308783 NINLQ9Y2I6 1382 aa13.44□□□□□ -0.26
KDM2A-201ENST00000308783 MED14O60244 1454 aa13.44□□□□□ -0.26
KDM2A-201ENST00000308783 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.44□□□□□ -0.26
KDM2A-201ENST00000308783 NME9Q86XW9 330 aa13.44□□□□□ -0.26
KDM2A-201ENST00000308783 FAM135BQ49AJ0 1406 aa13.43□□□□□ -0.26
KDM2A-201ENST00000308783 CPS1P31327 1500 aa13.43□□□□□ -0.26
KDM2A-201ENST00000308783 PPM1GO15355 546 aaPredicted RBP13.43□□□□□ -0.26
KDM2A-201ENST00000308783 CCDC61Q9Y6R9 512 aa13.43□□□□□ -0.26
KDM2A-201ENST00000308783 SHPRHQ149N8 1683 aa13.42□□□□□ -0.26
KDM2A-201ENST00000308783 CEP170BQ9Y4F5 1589 aaPredicted RBP13.42□□□□□ -0.26
KDM2A-201ENST00000308783 KCNA6P17658 529 aa13.42□□□□□ -0.26
KDM2A-201ENST00000308783 RCAN3Q9UKA8 241 aa13.42□□□□□ -0.26
KDM2A-201ENST00000308783 SIRT1Q96EB6 747 aa13.41□□□□□ -0.26
KDM2A-201ENST00000308783 TBX22Q9Y458 520 aa13.41□□□□□ -0.26
KDM2A-201ENST00000308783 INSRP06213 1382 aa13.41□□□□□ -0.26
KDM2A-201ENST00000308783 KNDC1Q76NI1 1749 aa13.41□□□□□ -0.26
KDM2A-201ENST00000308783 ZNF521Q96K83 1311 aa13.41□□□□□ -0.26
KDM2A-201ENST00000308783 PLIN1O60240 522 aa13.41□□□□□ -0.26
KDM2A-201ENST00000308783 NSD2O96028 1365 aa13.41□□□□□ -0.26
KDM2A-201ENST00000308783 PDE3BQ13370 1112 aa13.41□□□□□ -0.26
KDM2A-201ENST00000308783 U2AF1L5P0DN76 240 aaPredicted RBP13.4□□□□□ -0.26
KDM2A-201ENST00000308783 U2AF1Q01081 240 aaKnown RBP eCLIP13.4□□□□□ -0.26
KDM2A-201ENST00000308783 PMFBP1Q8TBY8 1022 aa13.4□□□□□ -0.26
KDM2A-201ENST00000308783 RNF123Q5XPI4 1314 aa13.4□□□□□ -0.26
KDM2A-201ENST00000308783 ATP7BP35670 1465 aa13.4□□□□□ -0.26
KDM2A-201ENST00000308783 U2SURPO15042 1029 aaKnown RBP13.4□□□□□ -0.27
KDM2A-201ENST00000308783 SECISBP2LQ93073 1101 aaKnown RBP13.4□□□□□ -0.27
KDM2A-201ENST00000308783 CPSF1Q10570 1443 aaKnown RBP13.39□□□□□ -0.27
KDM2A-201ENST00000308783 DUSP27Q5VZP5 1158 aa13.38□□□□□ -0.27
KDM2A-201ENST00000308783 CFAP53Q96M91 514 aa13.38□□□□□ -0.27
KDM2A-201ENST00000308783 ADAMTSL3P82987 1691 aa13.38□□□□□ -0.27
KDM2A-201ENST00000308783 CDK11BP21127 795 aaKnown RBP13.38□□□□□ -0.27
KDM2A-201ENST00000308783 GOLGA2Q08379 1002 aa13.38□□□□□ -0.27
KDM2A-201ENST00000308783 TCP11L2Q8N4U5 519 aa13.38□□□□□ -0.27
KDM2A-201ENST00000308783 EMILIN1Q9Y6C2 1016 aa13.38□□□□□ -0.27
KDM2A-201ENST00000308783 RRAGDQ9NQL2 400 aaPredicted RBP13.37□□□□□ -0.27
KDM2A-201ENST00000308783 ACEP12821 1306 aa13.37□□□□□ -0.27
KDM2A-201ENST00000308783 POLKQ9UBT6 870 aa13.37□□□□□ -0.27
KDM2A-201ENST00000308783 RRP1P56182 461 aaKnown RBP13.37□□□□□ -0.27
KDM2A-201ENST00000308783 RRS1Q15050 365 aaKnown RBP13.37□□□□□ -0.27
KDM2A-201ENST00000308783 SKAP1Q86WV1 359 aa13.36□□□□□ -0.27
KDM2A-201ENST00000308783 ANKLE2Q86XL3 938 aa13.36□□□□□ -0.27
KDM2A-201ENST00000308783 PRDM4Q9UKN5 801 aa13.36□□□□□ -0.27
KDM2A-201ENST00000308783 SOX12O15370 315 aa13.36□□□□□ -0.27
KDM2A-201ENST00000308783 NKTRP30414 1462 aaKnown RBP13.35□□□□□ -0.27
KDM2A-201ENST00000308783 CALD1Q05682 793 aaKnown RBP13.35□□□□□ -0.27
KDM2A-201ENST00000308783 SLFN5Q08AF3 891 aa13.35□□□□□ -0.27
KDM2A-201ENST00000308783 WWC1Q8IX03 1113 aa13.35□□□□□ -0.27
KDM2A-201ENST00000308783 PPP4R2Q9NY27 417 aa13.35□□□□□ -0.27
KDM2A-201ENST00000308783 KIF20BQ96Q89 1820 aa13.35□□□□□ -0.27
KDM2A-201ENST00000308783 E9PSI1 815 aa13.35□□□□□ -0.27
KDM2A-201ENST00000308783 RUNDC1Q96C34 613 aa13.35□□□□□ -0.27
KDM2A-201ENST00000308783 FTSJ3Q8IY81 847 aaKnown RBP13.35□□□□□ -0.27
KDM2A-201ENST00000308783 PRDM10Q9NQV6 1147 aa13.35□□□□□ -0.27
KDM2A-201ENST00000308783 EDC4Q6P2E9 1401 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms