RNA–Protein interactions for RNA: ENST00000308639.13

RELA-201, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RELA, Length 2,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-201ENST00000308639 NLRP1Q9C000 1473 aa26.62■■□□□ 1.85
RELA-201ENST00000308639 CD163L1Q9NR16 1453 aa26.62■■□□□ 1.85
RELA-201ENST00000308639 TRIM27P14373 513 aa26.62■■□□□ 1.85
RELA-201ENST00000308639 CYB5RLQ6IPT4 315 aa26.62■■□□□ 1.85
RELA-201ENST00000308639 COL3A1P02461 1466 aaPredicted RBP26.62■■□□□ 1.85
RELA-201ENST00000308639 CABP1Q9NZU7 370 aa26.62■■□□□ 1.85
RELA-201ENST00000308639 SLKQ9H2G2 1235 aaPredicted RBP26.61■■□□□ 1.85
RELA-201ENST00000308639 ARHGAP31Q2M1Z3 1444 aa26.61■■□□□ 1.85
RELA-201ENST00000308639 RWDD1Q9H446 243 aaPredicted RBP26.61■■□□□ 1.85
RELA-201ENST00000308639 RIPK4P57078 832 aa26.6■■□□□ 1.85
RELA-201ENST00000308639 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.6■■□□□ 1.85
RELA-201ENST00000308639 CDK19Q9BWU1 502 aa26.6■■□□□ 1.85
RELA-201ENST00000308639 RICTORQ6R327 1708 aa26.59■■□□□ 1.85
RELA-201ENST00000308639 YTHDC2Q9H6S0 1430 aaKnown RBP26.59■■□□□ 1.85
RELA-201ENST00000308639 TERF2IPQ9NYB0 399 aa26.59■■□□□ 1.85
RELA-201ENST00000308639 ITPRIPQ8IWB1 547 aa26.59■■□□□ 1.85
RELA-201ENST00000308639 TMEM131LA2VDJ0 1609 aa26.58■■□□□ 1.85
RELA-201ENST00000308639 UBE2Q2Q8WVN8 375 aa26.57■■□□□ 1.84
RELA-201ENST00000308639 NOB1Q9ULX3 412 aaKnown RBP26.57■■□□□ 1.84
RELA-201ENST00000308639 BRPF3Q9ULD4 1205 aa26.57■■□□□ 1.84
RELA-201ENST00000308639 PREX1Q8TCU6 1659 aa26.57■■□□□ 1.84
RELA-201ENST00000308639 WAPLQ7Z5K2 1190 aa26.56■■□□□ 1.84
RELA-201ENST00000308639 STAG3Q9UJ98 1225 aa26.56■■□□□ 1.84
RELA-201ENST00000308639 ZFYVE9O95405 1425 aa26.56■■□□□ 1.84
RELA-201ENST00000308639 ATAD2Q6PL18 1390 aa26.55■■□□□ 1.84
RELA-201ENST00000308639 DIAPH1O60610 1272 aaKnown RBP26.55■■□□□ 1.84
RELA-201ENST00000308639 TMEM57Q8N5G2 664 aa26.53■■□□□ 1.84
RELA-201ENST00000308639 AAMPQ13685 434 aa26.52■■□□□ 1.84
RELA-201ENST00000308639 HDGFL2Q7Z4V5 671 aaPredicted RBP26.52■■□□□ 1.84
RELA-201ENST00000308639 ATF7IPQ6VMQ6 1270 aa26.52■■□□□ 1.84
RELA-201ENST00000308639 SPRYD3Q8NCJ5 442 aa26.51■■□□□ 1.83
RELA-201ENST00000308639 THUMPD2Q9BTF0 503 aaKnown RBP26.51■■□□□ 1.83
RELA-201ENST00000308639 TBC1D32Q96NH3 1257 aa26.51■■□□□ 1.83
RELA-201ENST00000308639 HMOX1P09601 288 aa26.5■■□□□ 1.83
RELA-201ENST00000308639 NCBP3Q53F19 620 aaKnown RBP26.49■■□□□ 1.83
RELA-201ENST00000308639 ALKQ9UM73 1620 aa26.49■■□□□ 1.83
RELA-201ENST00000308639 PRKAR2BP31323 418 aa26.49■■□□□ 1.83
RELA-201ENST00000308639 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.49■■□□□ 1.83
RELA-201ENST00000308639 BECN1Q14457 450 aa26.47■■□□□ 1.83
RELA-201ENST00000308639 UPF2Q9HAU5 1272 aaKnown RBP26.47■■□□□ 1.83
RELA-201ENST00000308639 TBC1D2Q9BYX2 928 aa26.47■■□□□ 1.83
RELA-201ENST00000308639 ARHGEF40Q8TER5 1519 aa26.46■■□□□ 1.83
RELA-201ENST00000308639 CT47B1P0C2W7 299 aaPredicted RBP26.46■■□□□ 1.83
RELA-201ENST00000308639 MLECQ14165 292 aa26.46■■□□□ 1.83
RELA-201ENST00000308639 PHACTR3Q96KR7 559 aa26.46■■□□□ 1.83
RELA-201ENST00000308639 ZRANB1Q9UGI0 708 aa26.46■■□□□ 1.83
RELA-201ENST00000308639 ANKRD26Q9UPS8 1709 aa26.46■■□□□ 1.83
RELA-201ENST00000308639 MFAP1P55081 439 aaKnown RBP26.45■■□□□ 1.83
RELA-201ENST00000308639 POLKQ9UBT6 870 aa26.45■■□□□ 1.83
RELA-201ENST00000308639 DDX19BQ9UMR2 479 aa26.45■■□□□ 1.83
RELA-201ENST00000308639 LRRC7Q96NW7 1537 aa26.44■■□□□ 1.82
RELA-201ENST00000308639 CLTCQ00610 1675 aaKnown RBP26.43■■□□□ 1.82
RELA-201ENST00000308639 PNPLA6Q8IY17 1366 aa26.43■■□□□ 1.82
RELA-201ENST00000308639 EMILIN1Q9Y6C2 1016 aa26.43■■□□□ 1.82
RELA-201ENST00000308639 NCKAP5LQ9HCH0 1330 aa26.43■■□□□ 1.82
RELA-201ENST00000308639 RIMBP3CA6NJZ7 1639 aa26.43■■□□□ 1.82
RELA-201ENST00000308639 RIMBP3BA6NNM3 1639 aa26.43■■□□□ 1.82
RELA-201ENST00000308639 RIMBP3Q9UFD9 1639 aa26.43■■□□□ 1.82
RELA-201ENST00000308639 RSPH6AQ9H0K4 717 aa26.42■■□□□ 1.82
RELA-201ENST00000308639 ELL2O00472 640 aaPredicted RBP26.42■■□□□ 1.82
RELA-201ENST00000308639 MED14O60244 1454 aa26.41■■□□□ 1.82
RELA-201ENST00000308639 IL16Q14005 1332 aa26.41■■□□□ 1.82
RELA-201ENST00000308639 HDAC1Q13547 482 aaPredicted RBP26.41■■□□□ 1.82
RELA-201ENST00000308639 ZBTB40Q9NUA8 1239 aa26.41■■□□□ 1.82
RELA-201ENST00000308639 ANTXR1Q9H6X2 564 aa26.4■■□□□ 1.82
RELA-201ENST00000308639 KIF20BQ96Q89 1820 aa26.39■■□□□ 1.82
RELA-201ENST00000308639 NME9Q86XW9 330 aa26.39■■□□□ 1.82
RELA-201ENST00000308639 TSPYL6Q8N831 410 aa26.39■■□□□ 1.81
RELA-201ENST00000308639 FCHSD2O94868 740 aa26.38■■□□□ 1.81
RELA-201ENST00000308639 C1orf115Q9H7X2 142 aa26.38■■□□□ 1.81
RELA-201ENST00000308639 FAM69CQ0P6D2 419 aa26.38■■□□□ 1.81
RELA-201ENST00000308639 LNPKQ9C0E8 428 aa26.37■■□□□ 1.81
RELA-201ENST00000308639 SMC5Q8IY18 1101 aa26.36■■□□□ 1.81
RELA-201ENST00000308639 C22orf23Q9BZE7 217 aa26.36■■□□□ 1.81
RELA-201ENST00000308639 KIF16BQ96L93 1317 aa26.35■■□□□ 1.81
RELA-201ENST00000308639 FAM135BQ49AJ0 1406 aa26.35■■□□□ 1.81
RELA-201ENST00000308639 ZMYM3Q14202 1370 aa26.35■■□□□ 1.81
RELA-201ENST00000308639 MAP2P11137 1827 aaKnown RBP26.34■■□□□ 1.81
RELA-201ENST00000308639 TSPOAP1O95153 1857 aa26.33■■□□□ 1.81
RELA-201ENST00000308639 RRS1Q15050 365 aaKnown RBP26.33■■□□□ 1.81
RELA-201ENST00000308639 IPO8O15397 1037 aaKnown RBP26.32■■□□□ 1.8
RELA-201ENST00000308639 TXNDC2Q86VQ3 553 aa26.32■■□□□ 1.8
RELA-201ENST00000308639 PNNQ9H307 717 aaKnown RBP26.32■■□□□ 1.8
RELA-201ENST00000308639 A2ML1A8K2U0 1454 aa26.31■■□□□ 1.8
RELA-201ENST00000308639 NFE2L2Q16236 605 aa26.31■■□□□ 1.8
RELA-201ENST00000308639 RIMS2Q9UQ26 1411 aa26.3■■□□□ 1.8
RELA-201ENST00000308639 FAM83GA6ND36 823 aa26.3■■□□□ 1.8
RELA-201ENST00000308639 VAMP4O75379 141 aa26.3■■□□□ 1.8
RELA-201ENST00000308639 ALDH1L2Q3SY69 923 aa26.29■■□□□ 1.8
RELA-201ENST00000308639 DCTN1Q14203 1278 aa26.29■■□□□ 1.8
RELA-201ENST00000308639 IL13P35225 146 aa26.28■■□□□ 1.8
RELA-201ENST00000308639 MBIPQ9NS73 344 aa26.28■■□□□ 1.8
RELA-201ENST00000308639 METP08581 1390 aa26.28■■□□□ 1.8
RELA-201ENST00000308639 PPIP5K1Q6PFW1 1433 aa26.27■■□□□ 1.8
RELA-201ENST00000308639 NUCB1Q02818 461 aa26.27■■□□□ 1.8
RELA-201ENST00000308639 MRPL50Q8N5N7 158 aaKnown RBP26.27■■□□□ 1.8
RELA-201ENST00000308639 ARXQ96QS3 562 aa26.27■■□□□ 1.8
RELA-201ENST00000308639 WASLO00401 505 aaPredicted RBP26.26■■□□□ 1.79
RELA-201ENST00000308639 CDC42BPGQ6DT37 1551 aa26.26■■□□□ 1.79
RELA-201ENST00000308639 ATP7BP35670 1465 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms