RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 ERBINQ96RT1 1412 aa18.48■□□□□ 0.55
LEMD3-201ENST00000308330 GOLGA6L4A6NEF3 574 aa18.48■□□□□ 0.55
LEMD3-201ENST00000308330 FOXD4L1Q9NU39 408 aa18.48■□□□□ 0.55
LEMD3-201ENST00000308330 RBM28Q9NW13 759 aaKnown RBP18.48■□□□□ 0.55
LEMD3-201ENST00000308330 ANKRD30BQ9BXX2 1392 aa18.48■□□□□ 0.55
LEMD3-201ENST00000308330 MTHFSP49914 203 aa18.47■□□□□ 0.55
LEMD3-201ENST00000308330 NBPF8Q3BBV2 869 aa18.47■□□□□ 0.55
LEMD3-201ENST00000308330 XPCQ01831 940 aaPredicted RBP18.47■□□□□ 0.55
LEMD3-201ENST00000308330 NECTIN2Q92692 538 aa18.47■□□□□ 0.55
LEMD3-201ENST00000308330 RWDD1Q9H446 243 aaPredicted RBP18.47■□□□□ 0.55
LEMD3-201ENST00000308330 HMMRO75330 724 aa18.47■□□□□ 0.55
LEMD3-201ENST00000308330 CERS3Q8IU89 383 aa18.47■□□□□ 0.55
LEMD3-201ENST00000308330 SECISBP2LQ93073 1101 aaKnown RBP18.46■□□□□ 0.55
LEMD3-201ENST00000308330 RBM33Q96EV2 1170 aaKnown RBP18.46■□□□□ 0.55
LEMD3-201ENST00000308330 ASXL2Q76L83 1435 aa18.45■□□□□ 0.54
LEMD3-201ENST00000308330 CCDC7Q96M83 1385 aa18.45■□□□□ 0.54
LEMD3-201ENST00000308330 GOLIM4O00461 696 aa18.45■□□□□ 0.54
LEMD3-201ENST00000308330 NOC3LQ8WTT2 800 aaKnown RBP18.45■□□□□ 0.54
LEMD3-201ENST00000308330 ZNF692Q9BU19 519 aaPredicted RBP18.45■□□□□ 0.54
LEMD3-201ENST00000308330 SUPT6HQ7KZ85 1726 aaKnown RBP18.44■□□□□ 0.54
LEMD3-201ENST00000308330 PRDM11Q9NQV5 511 aa18.44■□□□□ 0.54
LEMD3-201ENST00000308330 STK11IPQ8N1F8 1099 aa18.44■□□□□ 0.54
LEMD3-201ENST00000308330 UTP14CQ5TAP6 766 aaKnown RBP18.44■□□□□ 0.54
LEMD3-201ENST00000308330 AKNAQ7Z591 1439 aa18.44■□□□□ 0.54
LEMD3-201ENST00000308330 NEFHP12036 1026 aa18.43■□□□□ 0.54
LEMD3-201ENST00000308330 TOMM22Q9NS69 142 aa18.43■□□□□ 0.54
LEMD3-201ENST00000308330 TPM4P67936 248 aa18.43■□□□□ 0.54
LEMD3-201ENST00000308330 NEXNQ0ZGT2 675 aa18.42■□□□□ 0.54
LEMD3-201ENST00000308330 WAPLQ7Z5K2 1190 aa18.42■□□□□ 0.54
LEMD3-201ENST00000308330 RRP1P56182 461 aaKnown RBP18.42■□□□□ 0.54
LEMD3-201ENST00000308330 MNS1Q8NEH6 495 aa18.42■□□□□ 0.54
LEMD3-201ENST00000308330 PCF11O94913 1555 aaKnown RBP18.42■□□□□ 0.54
LEMD3-201ENST00000308330 RTEL1-TNFRSF6BF6WH68 1400 aa18.42■□□□□ 0.54
LEMD3-201ENST00000308330 CAMSAP2Q08AD1 1489 aa18.41■□□□□ 0.54
LEMD3-201ENST00000308330 ROCK1Q13464 1354 aa18.41■□□□□ 0.54
LEMD3-201ENST00000308330 MCM4P33991 863 aa18.41■□□□□ 0.54
LEMD3-201ENST00000308330 CCDC61Q9Y6R9 512 aa18.41■□□□□ 0.54
LEMD3-201ENST00000308330 ABCC5O15440 1437 aa18.41■□□□□ 0.54
LEMD3-201ENST00000308330 NAIPQ13075 1403 aa18.41■□□□□ 0.54
LEMD3-201ENST00000308330 XRCC6P12956 609 aaKnown RBP eCLIP18.41■□□□□ 0.543e-6■■■□□ 16.1
LEMD3-201ENST00000308330 CLSTN1O94985 981 aa18.41■□□□□ 0.54
LEMD3-201ENST00000308330 GNL2Q13823 731 aaKnown RBP18.41■□□□□ 0.54
LEMD3-201ENST00000308330 DMTNQ08495 405 aa18.4■□□□□ 0.54
LEMD3-201ENST00000308330 ATP10BO94823 1461 aa18.4■□□□□ 0.54
LEMD3-201ENST00000308330 KIF16BQ96L93 1317 aa18.39■□□□□ 0.54
LEMD3-201ENST00000308330 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.39■□□□□ 0.54
LEMD3-201ENST00000308330 IGSF3O75054 1194 aa18.39■□□□□ 0.53
LEMD3-201ENST00000308330 OFD1O75665 1012 aa18.39■□□□□ 0.53
LEMD3-201ENST00000308330 TOM1L2Q6ZVM7 507 aa18.39■□□□□ 0.53
LEMD3-201ENST00000308330 IFT57Q9NWB7 429 aa18.39■□□□□ 0.53
LEMD3-201ENST00000308330 SARNPP82979 210 aaKnown RBP18.39■□□□□ 0.53
LEMD3-201ENST00000308330 RUNDC1Q96C34 613 aa18.39■□□□□ 0.53
LEMD3-201ENST00000308330 MYCBPQ99417 103 aaPredicted RBP18.39■□□□□ 0.53
LEMD3-201ENST00000308330 PPP6R1Q9UPN7 881 aa18.39■□□□□ 0.53
LEMD3-201ENST00000308330 CT47A1Q5JQC4 288 aaPredicted RBP18.39■□□□□ 0.53
LEMD3-201ENST00000308330 TSPYL4Q9UJ04 414 aa18.39■□□□□ 0.53
LEMD3-201ENST00000308330 AMOTL2Q9Y2J4 779 aa18.39■□□□□ 0.53
LEMD3-201ENST00000308330 KIF14Q15058 1648 aa18.38■□□□□ 0.53
LEMD3-201ENST00000308330 MPHOSPH10O00566 681 aaKnown RBP18.38■□□□□ 0.53
LEMD3-201ENST00000308330 MCCP23508 829 aa18.38■□□□□ 0.53
LEMD3-201ENST00000308330 ZC3H6P61129 1189 aaKnown RBP18.38■□□□□ 0.53
LEMD3-201ENST00000308330 NUDT16Q96DE0 195 aaKnown RBP18.37■□□□□ 0.53
LEMD3-201ENST00000308330 C9orf78Q9NZ63 289 aaPredicted RBP18.37■□□□□ 0.53
LEMD3-201ENST00000308330 TPM3P06753 285 aa18.37■□□□□ 0.53
LEMD3-201ENST00000308330 BIVM-ERCC5R4GMW8 1640 aa18.37■□□□□ 0.53
LEMD3-201ENST00000308330 GTF2F1P35269 517 aaKnown RBP eCLIP18.36■□□□□ 0.53
LEMD3-201ENST00000308330 NCOA1Q15788 1441 aa18.36■□□□□ 0.53
LEMD3-201ENST00000308330 DHX29Q7Z478 1369 aaKnown RBP18.36■□□□□ 0.53
LEMD3-201ENST00000308330 HSP90B2PQ58FF3 399 aa18.36■□□□□ 0.53
LEMD3-201ENST00000308330 FOXO3O43524 673 aa18.35■□□□□ 0.53
LEMD3-201ENST00000308330 ARID4AP29374 1257 aaPredicted RBP18.35■□□□□ 0.53
LEMD3-201ENST00000308330 DMRT2Q9Y5R5 561 aa18.35■□□□□ 0.53
LEMD3-201ENST00000308330 FKBP5Q13451 457 aaPredicted RBP18.35■□□□□ 0.53
LEMD3-201ENST00000308330 CCDC91Q7Z6B0 441 aa18.35■□□□□ 0.53
LEMD3-201ENST00000308330 GPATCH3Q96I76 525 aa18.35■□□□□ 0.53
LEMD3-201ENST00000308330 RASSF4Q9H2L5 321 aa18.35■□□□□ 0.53
LEMD3-201ENST00000308330 DDX58O95786 925 aaKnown RBP18.34■□□□□ 0.53
LEMD3-201ENST00000308330 ZKSCAN2Q63HK3 967 aa18.34■□□□□ 0.53
LEMD3-201ENST00000308330 DDX54Q8TDD1 881 aaKnown RBP18.34■□□□□ 0.53
LEMD3-201ENST00000308330 MRVI1Q9Y6F6 885 aa18.34■□□□□ 0.53
LEMD3-201ENST00000308330 PLEKHO1Q53GL0 409 aaPredicted RBP18.34■□□□□ 0.53
LEMD3-201ENST00000308330 TATP17735 454 aaPredicted RBP18.33■□□□□ 0.52
LEMD3-201ENST00000308330 GNAI1P63096 354 aa18.33■□□□□ 0.52
LEMD3-201ENST00000308330 CCAR2Q8N163 923 aaKnown RBP18.33■□□□□ 0.52
LEMD3-201ENST00000308330 CCDC112Q8NEF3 446 aa18.33■□□□□ 0.52
LEMD3-201ENST00000308330 RNF214Q8ND24 703 aa18.33■□□□□ 0.52
LEMD3-201ENST00000308330 ZBTB12Q9Y330 459 aaPredicted RBP18.33■□□□□ 0.52
LEMD3-201ENST00000308330 PRKAR2BP31323 418 aa18.32■□□□□ 0.52
LEMD3-201ENST00000308330 CFAP44Q96MT7 982 aa18.32■□□□□ 0.52
LEMD3-201ENST00000308330 PANK2Q9BZ23 570 aa18.32■□□□□ 0.52
LEMD3-201ENST00000308330 TERF1P54274 439 aa18.32■□□□□ 0.52
LEMD3-201ENST00000308330 PRIMPOLQ96LW4 560 aa18.32■□□□□ 0.52
LEMD3-201ENST00000308330 SULT6B1Q6IMI4 303 aa18.31■□□□□ 0.52
LEMD3-201ENST00000308330 PLCH2O75038 1416 aa18.31■□□□□ 0.52
LEMD3-201ENST00000308330 AIMP1Q12904 312 aaKnown RBP18.31■□□□□ 0.52
LEMD3-201ENST00000308330 PLIN1O60240 522 aa18.31■□□□□ 0.52
LEMD3-201ENST00000308330 MCM5P33992 734 aa18.31■□□□□ 0.52
LEMD3-201ENST00000308330 ADGRF5Q8IZF2 1346 aa18.3■□□□□ 0.52
LEMD3-201ENST00000308330 GAS2L2Q8NHY3 880 aa18.3■□□□□ 0.52
LEMD3-201ENST00000308330 ACBD3Q9H3P7 528 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms