RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 IQGAP1P46940 1657 aa20.4■□□□□ 0.86
CCDC8-201ENST00000307522 ASXL1Q8IXJ9 1541 aa20.4■□□□□ 0.86
CCDC8-201ENST00000307522 RPGRIP1LQ68CZ1 1315 aa20.4■□□□□ 0.86
CCDC8-201ENST00000307522 PDZRN3Q9UPQ7 1066 aa20.4■□□□□ 0.86
CCDC8-201ENST00000307522 DIP2BQ9P265 1576 aa20.39■□□□□ 0.86
CCDC8-201ENST00000307522 CAMSAP1Q5T5Y3 1602 aa20.39■□□□□ 0.86
CCDC8-201ENST00000307522 RICTORQ6R327 1708 aa20.39■□□□□ 0.85
CCDC8-201ENST00000307522 AAMPQ13685 434 aa20.39■□□□□ 0.85
CCDC8-201ENST00000307522 CHMP5Q9NZZ3 219 aa20.39■□□□□ 0.85
CCDC8-201ENST00000307522 PCDHB15Q9Y5E8 787 aa20.39■□□□□ 0.85
CCDC8-201ENST00000307522 SLFN5Q08AF3 891 aa20.38■□□□□ 0.85
CCDC8-201ENST00000307522 MYOM2P54296 1465 aa20.38■□□□□ 0.85
CCDC8-201ENST00000307522 NLRP1Q9C000 1473 aa20.38■□□□□ 0.85
CCDC8-201ENST00000307522 TPM2P07951 284 aa20.38■□□□□ 0.85
CCDC8-201ENST00000307522 CGNL1Q0VF96 1302 aa20.38■□□□□ 0.85
CCDC8-201ENST00000307522 ZMYM3Q14202 1370 aa20.38■□□□□ 0.85
CCDC8-201ENST00000307522 CFAP74Q9C0B2 1584 aa20.37■□□□□ 0.85
CCDC8-201ENST00000307522 BLMP54132 1417 aaPredicted RBP20.37■□□□□ 0.85
CCDC8-201ENST00000307522 XPCQ01831 940 aaPredicted RBP20.37■□□□□ 0.85
CCDC8-201ENST00000307522 TCP11L2Q8N4U5 519 aa20.36■□□□□ 0.85
CCDC8-201ENST00000307522 JARID2Q92833 1246 aaPredicted RBP20.36■□□□□ 0.85
CCDC8-201ENST00000307522 C22orf23Q9BZE7 217 aa20.35■□□□□ 0.85
CCDC8-201ENST00000307522 LMTK2Q8IWU2 1503 aa20.35■□□□□ 0.85
CCDC8-201ENST00000307522 A0A1W2PP64 1363 aa20.35■□□□□ 0.85
CCDC8-201ENST00000307522 ZMYM4Q5VZL5 1548 aa20.35■□□□□ 0.85
CCDC8-201ENST00000307522 MYO5BQ9ULV0 1848 aa20.35■□□□□ 0.85
CCDC8-201ENST00000307522 HMOX1P09601 288 aa20.34■□□□□ 0.85
CCDC8-201ENST00000307522 MAPK8IP3Q9UPT6 1336 aa20.34■□□□□ 0.85
CCDC8-201ENST00000307522 CALD1Q05682 793 aaKnown RBP20.34■□□□□ 0.85
CCDC8-201ENST00000307522 RLBP1P12271 317 aa20.34■□□□□ 0.85
CCDC8-201ENST00000307522 LTKP29376 864 aa20.34■□□□□ 0.85
CCDC8-201ENST00000307522 FYB1O15117 783 aa20.33■□□□□ 0.85
CCDC8-201ENST00000307522 TNPO1Q92973 898 aaKnown RBP20.33■□□□□ 0.85
CCDC8-201ENST00000307522 METP08581 1390 aa20.33■□□□□ 0.85
CCDC8-201ENST00000307522 NCLP19338 710 aaKnown RBP20.32■□□□□ 0.84
CCDC8-201ENST00000307522 MSNP26038 577 aaKnown RBP20.32■□□□□ 0.84
CCDC8-201ENST00000307522 NME9Q86XW9 330 aa20.32■□□□□ 0.84
CCDC8-201ENST00000307522 RRS1Q15050 365 aaKnown RBP20.32■□□□□ 0.84
CCDC8-201ENST00000307522 TSR2Q969E8 191 aaKnown RBP20.32■□□□□ 0.84
CCDC8-201ENST00000307522 ADGRB1O14514 1584 aa20.32■□□□□ 0.84
CCDC8-201ENST00000307522 MPNDQ8N594 471 aa20.31■□□□□ 0.84
CCDC8-201ENST00000307522 PMFBP1Q8TBY8 1022 aa20.31■□□□□ 0.84
CCDC8-201ENST00000307522 PIK3C2BO00750 1634 aa20.31■□□□□ 0.84
CCDC8-201ENST00000307522 YTHDC2Q9H6S0 1430 aaKnown RBP20.31■□□□□ 0.84
CCDC8-201ENST00000307522 NUTM2GQ5VZR2 741 aa20.31■□□□□ 0.84
CCDC8-201ENST00000307522 NEXMIFQ5QGS0 1516 aa20.31■□□□□ 0.84
CCDC8-201ENST00000307522 HSCBQ8IWL3 235 aa20.31■□□□□ 0.84
CCDC8-201ENST00000307522 NASPP49321 788 aaPredicted RBP20.3■□□□□ 0.84
CCDC8-201ENST00000307522 RIMS2Q9UQ26 1411 aa20.3■□□□□ 0.84
CCDC8-201ENST00000307522 KDM5AP29375 1690 aaKnown RBP20.3■□□□□ 0.84
CCDC8-201ENST00000307522 TSC1Q92574 1164 aa20.29■□□□□ 0.84
CCDC8-201ENST00000307522 LAMC1P11047 1609 aa20.29■□□□□ 0.84
CCDC8-201ENST00000307522 THUMPD2Q9BTF0 503 aaKnown RBP20.29■□□□□ 0.84
CCDC8-201ENST00000307522 EMILIN1Q9Y6C2 1016 aa20.29■□□□□ 0.84
CCDC8-201ENST00000307522 UQCRHLA0A096LP55 91 aa20.28■□□□□ 0.84
CCDC8-201ENST00000307522 UQCRHP07919 91 aa20.28■□□□□ 0.84
CCDC8-201ENST00000307522 NRXN1Q9ULB1 1477 aa20.28■□□□□ 0.84
CCDC8-201ENST00000307522 GLI2P10070 1586 aa20.28■□□□□ 0.84
CCDC8-201ENST00000307522 WWC1Q8IX03 1113 aa20.28■□□□□ 0.84
CCDC8-201ENST00000307522 HDGFL2Q7Z4V5 671 aaPredicted RBP20.27■□□□□ 0.84
CCDC8-201ENST00000307522 CFAP53Q96M91 514 aa20.27■□□□□ 0.84
CCDC8-201ENST00000307522 TERF2IPQ9NYB0 399 aa20.27■□□□□ 0.84
CCDC8-201ENST00000307522 MYOM1P52179 1685 aa20.27■□□□□ 0.84
CCDC8-201ENST00000307522 DDX11L8A8MPP1 907 aa20.27■□□□□ 0.84
CCDC8-201ENST00000307522 CLTCQ00610 1675 aaKnown RBP20.27■□□□□ 0.84
CCDC8-201ENST00000307522 ZNF521Q96K83 1311 aa20.27■□□□□ 0.83
CCDC8-201ENST00000307522 PPLO60437 1756 aa20.26■□□□□ 0.83
CCDC8-201ENST00000307522 TULP4Q9NRJ4 1543 aa20.26■□□□□ 0.83
CCDC8-201ENST00000307522 ELL2O00472 640 aaPredicted RBP20.25■□□□□ 0.83
CCDC8-201ENST00000307522 HSP90AB1P08238 724 aaKnown RBP20.25■□□□□ 0.83
CCDC8-201ENST00000307522 FAM177BA6PVY3 158 aa20.25■□□□□ 0.83
CCDC8-201ENST00000307522 ZSCAN30Q86W11 494 aa20.25■□□□□ 0.83
CCDC8-201ENST00000307522 QRICH2Q9H0J4 1663 aa20.24■□□□□ 0.83
CCDC8-201ENST00000307522 OFD1O75665 1012 aa20.23■□□□□ 0.83
CCDC8-201ENST00000307522 FGD1P98174 961 aa20.23■□□□□ 0.83
CCDC8-201ENST00000307522 ZNF692Q9BU19 519 aaPredicted RBP20.23■□□□□ 0.83
CCDC8-201ENST00000307522 NUDT16Q96DE0 195 aaKnown RBP20.23■□□□□ 0.83
CCDC8-201ENST00000307522 C14orf37Q86TY3 774 aa20.22■□□□□ 0.83
CCDC8-201ENST00000307522 RBM42Q9BTD8 480 aaKnown RBP20.22■□□□□ 0.83
CCDC8-201ENST00000307522 CD2BP2O95400 341 aaKnown RBP20.21■□□□□ 0.83
CCDC8-201ENST00000307522 SSFA2P28290 1259 aa20.21■□□□□ 0.83
CCDC8-201ENST00000307522 ARHGAP31Q2M1Z3 1444 aa20.21■□□□□ 0.83
CCDC8-201ENST00000307522 A2ML1A8K2U0 1454 aa20.21■□□□□ 0.83
CCDC8-201ENST00000307522 SLC24A1O60721 1099 aa20.21■□□□□ 0.83
CCDC8-201ENST00000307522 ANP32BQ92688 251 aaKnown RBP20.21■□□□□ 0.83
CCDC8-201ENST00000307522 PREX1Q8TCU6 1659 aa20.2■□□□□ 0.83
CCDC8-201ENST00000307522 ANKRD36BQ8N2N9 1353 aa20.2■□□□□ 0.82
CCDC8-201ENST00000307522 RUNDC1Q96C34 613 aa20.2■□□□□ 0.82
CCDC8-201ENST00000307522 CHAMP1Q96JM3 812 aa20.2■□□□□ 0.82
CCDC8-201ENST00000307522 DDX49Q9Y6V7 483 aaKnown RBP20.2■□□□□ 0.82
CCDC8-201ENST00000307522 IFT172Q9UG01 1749 aa20.2■□□□□ 0.82
CCDC8-201ENST00000307522 TNRQ92752 1358 aa20.2■□□□□ 0.82
CCDC8-201ENST00000307522 IGSF3O75054 1194 aa20.19■□□□□ 0.82
CCDC8-201ENST00000307522 NKTRP30414 1462 aaKnown RBP20.19■□□□□ 0.82
CCDC8-201ENST00000307522 WASLO00401 505 aaPredicted RBP20.19■□□□□ 0.82
CCDC8-201ENST00000307522 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.18■□□□□ 0.82
CCDC8-201ENST00000307522 TMEM131LA2VDJ0 1609 aa20.18■□□□□ 0.82
CCDC8-201ENST00000307522 CCDC173Q0VFZ6 552 aa20.16■□□□□ 0.82
CCDC8-201ENST00000307522 DCTN1Q14203 1278 aa20.16■□□□□ 0.82
CCDC8-201ENST00000307522 TPRNQ4KMQ1 711 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms