RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 CPLX2Q6PUV4 134 aaKnown RBP19.82■□□□□ 0.76
BRD3-201ENST00000303407 BICD2Q8TD16 824 aa19.82■□□□□ 0.76
BRD3-201ENST00000303407 NEUROD6Q96NK8 337 aa19.82■□□□□ 0.76
BRD3-201ENST00000303407 RRS1Q15050 365 aaKnown RBP19.82■□□□□ 0.76
BRD3-201ENST00000303407 RAPGEF6Q8TEU7 1601 aa19.81■□□□□ 0.76
BRD3-201ENST00000303407 TPD52L1Q16890 204 aaPredicted RBP19.8■□□□□ 0.76
BRD3-201ENST00000303407 CTTNBP2Q8WZ74 1663 aa19.8■□□□□ 0.76
BRD3-201ENST00000303407 FOSBP53539 338 aa19.8■□□□□ 0.76
BRD3-201ENST00000303407 TRDNQ13061 729 aa19.8■□□□□ 0.76
BRD3-201ENST00000303407 FCHSD2O94868 740 aa19.79■□□□□ 0.76
BRD3-201ENST00000303407 PTPRKQ15262 1439 aa19.79■□□□□ 0.76
BRD3-201ENST00000303407 CCT4P50991 539 aaKnown RBP19.79■□□□□ 0.76
BRD3-201ENST00000303407 MARCH6O60337 910 aa19.79■□□□□ 0.76
BRD3-201ENST00000303407 TMPOP42166 694 aaKnown RBP19.79■□□□□ 0.76
BRD3-201ENST00000303407 CLASRPQ8N2M8 674 aaKnown RBP19.79■□□□□ 0.76
BRD3-201ENST00000303407 FSD1Q9BTV5 496 aa19.78■□□□□ 0.76
BRD3-201ENST00000303407 RABEP1Q15276 862 aa19.78■□□□□ 0.76
BRD3-201ENST00000303407 NFXL1Q6ZNB6 911 aa19.78■□□□□ 0.76
BRD3-201ENST00000303407 CHD1LQ86WJ1 897 aa19.78■□□□□ 0.76
BRD3-201ENST00000303407 CD109Q6YHK3 1445 aa19.78■□□□□ 0.76
BRD3-201ENST00000303407 TRAK2O60296 914 aa19.78■□□□□ 0.76
BRD3-201ENST00000303407 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.77■□□□□ 0.76
BRD3-201ENST00000303407 THEMISQ8N1K5 641 aaPredicted RBP19.77■□□□□ 0.76
BRD3-201ENST00000303407 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.77■□□□□ 0.76
BRD3-201ENST00000303407 GPATCH8Q9UKJ3 1502 aaKnown RBP19.77■□□□□ 0.75
BRD3-201ENST00000303407 HDGFL1Q5TGJ6 251 aa19.76■□□□□ 0.75
BRD3-201ENST00000303407 ADGRF5Q8IZF2 1346 aa19.76■□□□□ 0.75
BRD3-201ENST00000303407 PES1O00541 588 aaKnown RBP19.76■□□□□ 0.75
BRD3-201ENST00000303407 PSMA5P28066 241 aa19.76■□□□□ 0.75
BRD3-201ENST00000303407 NFE2L2Q16236 605 aa19.76■□□□□ 0.75
BRD3-201ENST00000303407 AMER1Q5JTC6 1135 aaPredicted RBP19.76■□□□□ 0.75
BRD3-201ENST00000303407 VPS37DQ86XT2 251 aa19.76■□□□□ 0.75
BRD3-201ENST00000303407 DISP3Q9P2K9 1392 aa19.75■□□□□ 0.75
BRD3-201ENST00000303407 NEK4P51957 841 aa19.75■□□□□ 0.75
BRD3-201ENST00000303407 NKTRP30414 1462 aaKnown RBP19.75■□□□□ 0.75
BRD3-201ENST00000303407 SCAF11Q99590 1463 aaKnown RBP19.75■□□□□ 0.75
BRD3-201ENST00000303407 TPM3P06753 285 aa19.75■□□□□ 0.75
BRD3-201ENST00000303407 WASHC4Q2M389 1173 aa19.75■□□□□ 0.75
BRD3-201ENST00000303407 VPS53Q5VIR6 699 aa19.75■□□□□ 0.75
BRD3-201ENST00000303407 AMOTL1Q8IY63 956 aa19.75■□□□□ 0.75
BRD3-201ENST00000303407 NOL10Q9BSC4 688 aaKnown RBP19.75■□□□□ 0.75
BRD3-201ENST00000303407 MRE11P49959 708 aa19.74■□□□□ 0.75
BRD3-201ENST00000303407 C20orf194Q5TEA3 1177 aa19.74■□□□□ 0.75
BRD3-201ENST00000303407 NOC3LQ8WTT2 800 aaKnown RBP19.74■□□□□ 0.75
BRD3-201ENST00000303407 LRRCC1Q9C099 1032 aa19.74■□□□□ 0.75
BRD3-201ENST00000303407 HSP90AA2PQ14568 343 aaPredicted RBP19.74■□□□□ 0.75
BRD3-201ENST00000303407 NUDT16Q96DE0 195 aaKnown RBP19.74■□□□□ 0.75
BRD3-201ENST00000303407 ITSN2Q9NZM3 1697 aa19.73■□□□□ 0.75
BRD3-201ENST00000303407 SASS6Q6UVJ0 657 aa19.73■□□□□ 0.75
BRD3-201ENST00000303407 ERC1Q8IUD2 1116 aa19.73■□□□□ 0.75
BRD3-201ENST00000303407 SLC26A8Q96RN1 970 aa19.73■□□□□ 0.75
BRD3-201ENST00000303407 TMEM57Q8N5G2 664 aa19.73■□□□□ 0.75
BRD3-201ENST00000303407 DNAJC2Q99543 621 aaKnown RBP19.73■□□□□ 0.75
BRD3-201ENST00000303407 PROSER2Q86WR7 435 aaPredicted RBP19.73■□□□□ 0.75
BRD3-201ENST00000303407 CFAP43Q8NDM7 1665 aa19.72■□□□□ 0.75
BRD3-201ENST00000303407 ERICH2A1L162 156 aa19.72■□□□□ 0.75
BRD3-201ENST00000303407 WAPLQ7Z5K2 1190 aa19.72■□□□□ 0.75
BRD3-201ENST00000303407 NASPP49321 788 aaPredicted RBP19.71■□□□□ 0.75
BRD3-201ENST00000303407 MCM2P49736 904 aa19.71■□□□□ 0.75
BRD3-201ENST00000303407 CCDC27Q2M243 656 aa19.71■□□□□ 0.75
BRD3-201ENST00000303407 RALYLQ86SE5 291 aaKnown RBP19.71■□□□□ 0.75
BRD3-201ENST00000303407 FBXW7Q969H0 707 aa19.71■□□□□ 0.75
BRD3-201ENST00000303407 HIP1O00291 1037 aa19.7■□□□□ 0.74
BRD3-201ENST00000303407 CAVIN1Q6NZI2 390 aaKnown RBP19.7■□□□□ 0.74
BRD3-201ENST00000303407 ZNF592Q92610 1267 aa19.7■□□□□ 0.74
BRD3-201ENST00000303407 TATP17735 454 aaPredicted RBP19.7■□□□□ 0.74
BRD3-201ENST00000303407 ZNF530Q6P9A1 599 aaPredicted RBP19.7■□□□□ 0.74
BRD3-201ENST00000303407 NOS1P29475 1434 aa19.7■□□□□ 0.74
BRD3-201ENST00000303407 RARSP54136 660 aaKnown RBP19.69■□□□□ 0.74
BRD3-201ENST00000303407 SRCIN1Q9C0H9 1055 aa19.69■□□□□ 0.74
BRD3-201ENST00000303407 CCDC73Q6ZRK6 1079 aa19.69■□□□□ 0.74
BRD3-201ENST00000303407 ZNF428Q96B54 188 aa19.69■□□□□ 0.74
BRD3-201ENST00000303407 K7ELQ4 463 aaPredicted RBP19.69■□□□□ 0.74
BRD3-201ENST00000303407 MAP4K4O95819 1239 aaPredicted RBP19.69■□□□□ 0.74
BRD3-201ENST00000303407 PRPF40AO75400 957 aaKnown RBP19.68■□□□□ 0.74
BRD3-201ENST00000303407 FANCAO15360 1455 aa19.68■□□□□ 0.74
BRD3-201ENST00000303407 TPM1P09493 284 aa19.68■□□□□ 0.74
BRD3-201ENST00000303407 TSR1Q2NL82 804 aaKnown RBP19.68■□□□□ 0.74
BRD3-201ENST00000303407 TPM2P07951 284 aa19.68■□□□□ 0.74
BRD3-201ENST00000303407 HOOK1Q9UJC3 728 aaKnown RBP19.68■□□□□ 0.74
BRD3-201ENST00000303407 THUMPD2Q9BTF0 503 aaKnown RBP19.67■□□□□ 0.74
BRD3-201ENST00000303407 GOLGA6L1Q8N7Z2 621 aa19.67■□□□□ 0.74
BRD3-201ENST00000303407 SKAP1Q86WV1 359 aa19.67■□□□□ 0.74
BRD3-201ENST00000303407 CCDC61Q9Y6R9 512 aa19.67■□□□□ 0.74
BRD3-201ENST00000303407 RALGAPBQ86X10 1494 aa19.67■□□□□ 0.74
BRD3-201ENST00000303407 MSH5O43196 834 aa19.66■□□□□ 0.74
BRD3-201ENST00000303407 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.66■□□□□ 0.74
BRD3-201ENST00000303407 KIF6Q6ZMV9 814 aa19.66■□□□□ 0.74
BRD3-201ENST00000303407 FAM43AQ8N2R8 423 aa19.66■□□□□ 0.74
BRD3-201ENST00000303407 NUP153P49790 1475 aaKnown RBP19.66■□□□□ 0.74
BRD3-201ENST00000303407 RNF214Q8ND24 703 aa19.65■□□□□ 0.74
BRD3-201ENST00000303407 IFT57Q9NWB7 429 aa19.65■□□□□ 0.74
BRD3-201ENST00000303407 CWC22Q9HCG8 908 aaKnown RBP19.64■□□□□ 0.74
BRD3-201ENST00000303407 ABCC11Q96J66 1382 aa19.64■□□□□ 0.73
BRD3-201ENST00000303407 RAD21O60216 631 aa19.64■□□□□ 0.73
BRD3-201ENST00000303407 SIL1Q9H173 461 aa19.64■□□□□ 0.73
BRD3-201ENST00000303407 CCDC39Q9UFE4 941 aa19.64■□□□□ 0.73
BRD3-201ENST00000303407 MBD3O95983 291 aa19.64■□□□□ 0.73
BRD3-201ENST00000303407 SAFBQ15424 915 aaKnown RBP eCLIP19.64■□□□□ 0.73
BRD3-201ENST00000303407 BTBD11A6QL63 1104 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms