RNA–Protein interactions for RNA: ENST00000298852.7

PSMC3-201, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PSMC3, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-201ENST00000298852 KRT28Q7Z3Y7 464 aa22.57■■□□□ 1.2
PSMC3-201ENST00000298852 KIF20BQ96Q89 1820 aa22.57■■□□□ 1.2
PSMC3-201ENST00000298852 KNSTRNQ9Y448 316 aa22.57■■□□□ 1.2
PSMC3-201ENST00000298852 USP54Q70EL1 1684 aa22.56■■□□□ 1.2
PSMC3-201ENST00000298852 ALS2Q96Q42 1657 aa22.56■■□□□ 1.2
PSMC3-201ENST00000298852 CGNL1Q0VF96 1302 aa22.56■■□□□ 1.2
PSMC3-201ENST00000298852 TTC21BQ7Z4L5 1316 aa22.56■■□□□ 1.2
PSMC3-201ENST00000298852 NSD2O96028 1365 aa22.55■■□□□ 1.2
PSMC3-201ENST00000298852 PHLPP1O60346 1717 aa22.55■■□□□ 1.2
PSMC3-201ENST00000298852 PIP4K2BP78356 416 aa22.55■■□□□ 1.2
PSMC3-201ENST00000298852 ANKRD26Q9UPS8 1709 aa22.54■■□□□ 1.2
PSMC3-201ENST00000298852 COL16A1Q07092 1604 aaPredicted RBP22.53■■□□□ 1.2
PSMC3-201ENST00000298852 TNS3Q68CZ2 1445 aa22.53■■□□□ 1.2
PSMC3-201ENST00000298852 PIK3C2AO00443 1686 aa22.53■■□□□ 1.2
PSMC3-201ENST00000298852 AMER1Q5JTC6 1135 aaPredicted RBP22.52■■□□□ 1.19
PSMC3-201ENST00000298852 SCAF1Q9H7N4 1312 aaKnown RBP22.51■■□□□ 1.19
PSMC3-201ENST00000298852 DDX17Q92841 729 aaKnown RBP22.51■■□□□ 1.19
PSMC3-201ENST00000298852 ARHGEF10O15013 1369 aa22.51■■□□□ 1.19
PSMC3-201ENST00000298852 USP31Q70CQ4 1352 aa22.51■■□□□ 1.19
PSMC3-201ENST00000298852 SPATA31A3Q5VYP0 1347 aa22.5■■□□□ 1.19
PSMC3-201ENST00000298852 FYB1O15117 783 aa22.49■■□□□ 1.19
PSMC3-201ENST00000298852 XPCQ01831 940 aaPredicted RBP22.49■■□□□ 1.19
PSMC3-201ENST00000298852 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.48■■□□□ 1.19
PSMC3-201ENST00000298852 LRRC59Q96AG4 307 aaKnown RBP22.48■■□□□ 1.19
PSMC3-201ENST00000298852 MED1Q15648 1581 aaPredicted RBP22.48■■□□□ 1.19
PSMC3-201ENST00000298852 MARF1Q9Y4F3 1742 aaKnown RBP22.48■■□□□ 1.19
PSMC3-201ENST00000298852 PAK3O75914 559 aaPredicted RBP22.47■■□□□ 1.19
PSMC3-201ENST00000298852 ABTB2Q8N961 1025 aa22.47■■□□□ 1.19
PSMC3-201ENST00000298852 OVOS2A0A0J9YW53 1432 aa22.46■■□□□ 1.19
PSMC3-201ENST00000298852 OVOS2Q6IE36 1432 aa22.46■■□□□ 1.19
PSMC3-201ENST00000298852 COL22A1Q8NFW1 1626 aaPredicted RBP22.45■■□□□ 1.19
PSMC3-201ENST00000298852 NME9Q86XW9 330 aa22.45■■□□□ 1.18
PSMC3-201ENST00000298852 CRYBG1Q9Y4K1 1723 aa22.43■■□□□ 1.18
PSMC3-201ENST00000298852 NLRP13Q86W25 1043 aa22.43■■□□□ 1.18
PSMC3-201ENST00000298852 FBXO41Q8TF61 875 aa22.43■■□□□ 1.18
PSMC3-201ENST00000298852 SHPRHQ149N8 1683 aa22.43■■□□□ 1.18
PSMC3-201ENST00000298852 COG3Q96JB2 828 aa22.42■■□□□ 1.18
PSMC3-201ENST00000298852 USP19O94966 1318 aa22.42■■□□□ 1.18
PSMC3-201ENST00000298852 SLIT3O75094 1523 aa22.42■■□□□ 1.18
PSMC3-201ENST00000298852 NLRP6P59044 892 aa22.41■■□□□ 1.18
PSMC3-201ENST00000298852 GGNBP2Q9H3C7 697 aa22.41■■□□□ 1.18
PSMC3-201ENST00000298852 DIEXFQ68CQ4 756 aaKnown RBP22.4■■□□□ 1.18
PSMC3-201ENST00000298852 PNPLA6Q8IY17 1366 aa22.4■■□□□ 1.18
PSMC3-201ENST00000298852 PARD3Q8TEW0 1356 aa22.4■■□□□ 1.18
PSMC3-201ENST00000298852 PHRF1Q9P1Y6 1649 aaKnown RBP22.39■■□□□ 1.17
PSMC3-201ENST00000298852 ABCA3Q99758 1704 aa22.39■■□□□ 1.17
PSMC3-201ENST00000298852 CC2D1BQ5T0F9 858 aaKnown RBP22.38■■□□□ 1.17
PSMC3-201ENST00000298852 RALBP1Q15311 655 aa22.37■■□□□ 1.17
PSMC3-201ENST00000298852 LMOD2Q6P5Q4 547 aa22.37■■□□□ 1.17
PSMC3-201ENST00000298852 JCADQ9P266 1359 aa22.37■■□□□ 1.17
PSMC3-201ENST00000298852 HSPA1LP34931 641 aa22.36■■□□□ 1.17
PSMC3-201ENST00000298852 AATKQ6ZMQ8 1374 aa22.36■■□□□ 1.17
PSMC3-201ENST00000298852 MORC1Q86VD1 984 aa22.36■■□□□ 1.17
PSMC3-201ENST00000298852 KCNH5Q8NCM2 988 aa22.36■■□□□ 1.17
PSMC3-201ENST00000298852 ZRANB1Q9UGI0 708 aa22.36■■□□□ 1.17
PSMC3-201ENST00000298852 PRKRIP1Q9H875 184 aaPredicted RBP22.35■■□□□ 1.17
PSMC3-201ENST00000298852 NFAT5O94916 1531 aa22.35■■□□□ 1.17
PSMC3-201ENST00000298852 ANP32CO43423 234 aa22.34■■□□□ 1.17
PSMC3-201ENST00000298852 NUTM2GQ5VZR2 741 aa22.34■■□□□ 1.17
PSMC3-201ENST00000298852 MAP2P11137 1827 aaKnown RBP22.33■■□□□ 1.17
PSMC3-201ENST00000298852 GCP02774 474 aa22.31■■□□□ 1.16
PSMC3-201ENST00000298852 SPATA31A6Q5VVP1 1343 aa22.29■■□□□ 1.16
PSMC3-201ENST00000298852 LTN1O94822 1766 aa22.29■■□□□ 1.16
PSMC3-201ENST00000298852 SMG6Q86US8 1419 aaKnown RBP22.29■■□□□ 1.16
PSMC3-201ENST00000298852 ABCC6O95255 1503 aa22.29■■□□□ 1.16
PSMC3-201ENST00000298852 CPDO75976 1380 aa22.29■■□□□ 1.16
PSMC3-201ENST00000298852 KIF24Q5T7B8 1368 aa22.29■■□□□ 1.16
PSMC3-201ENST00000298852 MYBBP1AQ9BQG0 1328 aaKnown RBP22.27■■□□□ 1.16
PSMC3-201ENST00000298852 CABLES1Q8TDN4 633 aa22.26■■□□□ 1.15
PSMC3-201ENST00000298852 RTL1A6NKG5 1358 aa22.25■■□□□ 1.15
PSMC3-201ENST00000298852 PPP2R1AP30153 589 aa22.25■■□□□ 1.15
PSMC3-201ENST00000298852 ARHGEF25Q86VW2 580 aa22.24■■□□□ 1.15
PSMC3-201ENST00000298852 TNNT2P45379 298 aaPredicted RBP22.23■■□□□ 1.15
PSMC3-201ENST00000298852 HAP1P54257 671 aaPredicted RBP22.23■■□□□ 1.15
PSMC3-201ENST00000298852 CNGB1Q14028 1251 aaPredicted RBP22.23■■□□□ 1.15
PSMC3-201ENST00000298852 POLKQ9UBT6 870 aa22.23■■□□□ 1.15
PSMC3-201ENST00000298852 CDK12Q9NYV4 1490 aaPredicted RBP22.23■■□□□ 1.15
PSMC3-201ENST00000298852 MAP3K19Q56UN5 1328 aa22.22■■□□□ 1.15
PSMC3-201ENST00000298852 COL18A1P39060 1754 aa22.21■■□□□ 1.15
PSMC3-201ENST00000298852 INSRP06213 1382 aa22.21■■□□□ 1.15
PSMC3-201ENST00000298852 PEAK1Q9H792 1746 aa22.21■■□□□ 1.15
PSMC3-201ENST00000298852 FLT4P35916 1363 aa22.2■■□□□ 1.14
PSMC3-201ENST00000298852 COL14A1Q05707 1796 aaKnown RBP22.2■■□□□ 1.14
PSMC3-201ENST00000298852 SOX12O15370 315 aa22.2■■□□□ 1.14
PSMC3-201ENST00000298852 KIAA0232Q92628 1395 aa22.2■■□□□ 1.14
PSMC3-201ENST00000298852 LMO7Q8WWI1 1683 aa22.19■■□□□ 1.14
PSMC3-201ENST00000298852 MTHFSP49914 203 aa22.19■■□□□ 1.14
PSMC3-201ENST00000298852 RRS1Q15050 365 aaKnown RBP22.19■■□□□ 1.14
PSMC3-201ENST00000298852 FBLN1P23142 703 aa22.18■■□□□ 1.14
PSMC3-201ENST00000298852 EMILIN1Q9Y6C2 1016 aa22.18■■□□□ 1.14
PSMC3-201ENST00000298852 BLMP54132 1417 aaPredicted RBP22.18■■□□□ 1.14
PSMC3-201ENST00000298852 ZC3H6P61129 1189 aaKnown RBP22.17■■□□□ 1.14
PSMC3-201ENST00000298852 PRDM11Q9NQV5 511 aa22.17■■□□□ 1.14
PSMC3-201ENST00000298852 PLEKHG5O94827 1062 aa22.16■■□□□ 1.14
PSMC3-201ENST00000298852 IP6K1Q92551 441 aa22.16■■□□□ 1.14
PSMC3-201ENST00000298852 LRP6O75581 1613 aa22.16■■□□□ 1.14
PSMC3-201ENST00000298852 AMPHP49418 695 aa22.16■■□□□ 1.14
PSMC3-201ENST00000298852 NWD2Q9ULI1 1742 aa22.15■■□□□ 1.14
PSMC3-201ENST00000298852 CCER2I3L3R5 266 aa22.15■■□□□ 1.14
PSMC3-201ENST00000298852 HOXC9P31274 260 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms