RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 SNX21Q969T3 373 aa24.21■■□□□ 1.47
TRA2A-201ENST00000297071 TRAK1Q9UPV9 953 aa24.21■■□□□ 1.47
TRA2A-201ENST00000297071 DDX11L8A8MPP1 907 aa24.2■■□□□ 1.46
TRA2A-201ENST00000297071 ABCC3O15438 1527 aa24.2■■□□□ 1.46
TRA2A-201ENST00000297071 RBM25P49756 843 aaKnown RBP24.19■■□□□ 1.46
TRA2A-201ENST00000297071 UBE2Q2Q8WVN8 375 aa24.19■■□□□ 1.46
TRA2A-201ENST00000297071 PLEKHF1Q96S99 279 aa24.19■■□□□ 1.46
TRA2A-201ENST00000297071 CIZ1Q9ULV3 898 aaPredicted RBP24.19■■□□□ 1.46
TRA2A-201ENST00000297071 CFAP65Q6ZU64 1925 aaKnown RBP24.19■■□□□ 1.46
TRA2A-201ENST00000297071 ATF7IPQ6VMQ6 1270 aa24.19■■□□□ 1.46
TRA2A-201ENST00000297071 CD109Q6YHK3 1445 aa24.18■■□□□ 1.46
TRA2A-201ENST00000297071 KIF13AQ9H1H9 1805 aa24.18■■□□□ 1.46
TRA2A-201ENST00000297071 PTMSP20962 102 aa24.18■■□□□ 1.46
TRA2A-201ENST00000297071 BRPF1P55201 1214 aaPredicted RBP24.18■■□□□ 1.46
TRA2A-201ENST00000297071 DDIT3P35638 169 aa24.17■■□□□ 1.46
TRA2A-201ENST00000297071 ZNF428Q96B54 188 aa24.17■■□□□ 1.46
TRA2A-201ENST00000297071 PNNQ9H307 717 aaKnown RBP24.17■■□□□ 1.46
TRA2A-201ENST00000297071 KIF20BQ96Q89 1820 aa24.17■■□□□ 1.46
TRA2A-201ENST00000297071 KIF16BQ96L93 1317 aa24.17■■□□□ 1.46
TRA2A-201ENST00000297071 SIGLEC1Q9BZZ2 1709 aa24.17■■□□□ 1.46
TRA2A-201ENST00000297071 U2AF1L5P0DN76 240 aaPredicted RBP24.17■■□□□ 1.46
TRA2A-201ENST00000297071 MRE11P49959 708 aa24.17■■□□□ 1.46
TRA2A-201ENST00000297071 U2AF1Q01081 240 aaKnown RBP eCLIP24.17■■□□□ 1.461e-7■■■□□ 15.2
TRA2A-201ENST00000297071 XRCC6P12956 609 aaKnown RBP eCLIP24.16■■□□□ 1.464e-7■□□□□ 9.8
TRA2A-201ENST00000297071 ALDH1L2Q3SY69 923 aa24.16■■□□□ 1.46
TRA2A-201ENST00000297071 ZNF692Q9BU19 519 aaPredicted RBP24.16■■□□□ 1.46
TRA2A-201ENST00000297071 PPIP5K1Q6PFW1 1433 aa24.15■■□□□ 1.46
TRA2A-201ENST00000297071 IPO8O15397 1037 aaKnown RBP24.15■■□□□ 1.46
TRA2A-201ENST00000297071 TRIM27P14373 513 aa24.15■■□□□ 1.46
TRA2A-201ENST00000297071 TMPOP42166 694 aaKnown RBP24.15■■□□□ 1.46
TRA2A-201ENST00000297071 HSCBQ8IWL3 235 aa24.15■■□□□ 1.46
TRA2A-201ENST00000297071 BCL2L13Q9BXK5 485 aa24.15■■□□□ 1.46
TRA2A-201ENST00000297071 SMC4Q9NTJ3 1288 aa24.15■■□□□ 1.46
TRA2A-201ENST00000297071 RRAGDQ9NQL2 400 aaPredicted RBP24.14■■□□□ 1.46
TRA2A-201ENST00000297071 ZBTB40Q9NUA8 1239 aa24.14■■□□□ 1.45
TRA2A-201ENST00000297071 TRAK2O60296 914 aa24.13■■□□□ 1.45
TRA2A-201ENST00000297071 CLCN1P35523 988 aa24.13■■□□□ 1.45
TRA2A-201ENST00000297071 CHMP4BQ9H444 224 aaKnown RBP24.13■■□□□ 1.45
TRA2A-201ENST00000297071 TRIM35Q9UPQ4 493 aa24.13■■□□□ 1.45
TRA2A-201ENST00000297071 TNNT2P45379 298 aaPredicted RBP24.12■■□□□ 1.45
TRA2A-201ENST00000297071 EXOSC9Q06265 439 aaKnown RBP24.12■■□□□ 1.45
TRA2A-201ENST00000297071 ARHGAP31Q2M1Z3 1444 aa24.12■■□□□ 1.45
TRA2A-201ENST00000297071 POGZQ7Z3K3 1410 aa24.12■■□□□ 1.45
TRA2A-201ENST00000297071 VGFO15240 615 aaPredicted RBP24.12■■□□□ 1.45
TRA2A-201ENST00000297071 PNPLA6Q8IY17 1366 aa24.11■■□□□ 1.45
TRA2A-201ENST00000297071 NUCB1Q02818 461 aa24.11■■□□□ 1.45
TRA2A-201ENST00000297071 SSH1Q8WYL5 1049 aa24.11■■□□□ 1.45
TRA2A-201ENST00000297071 ASXL2Q76L83 1435 aa24.1■■□□□ 1.45
TRA2A-201ENST00000297071 EIF5BO60841 1220 aaKnown RBP24.1■■□□□ 1.45
TRA2A-201ENST00000297071 ATAD2Q6PL18 1390 aa24.1■■□□□ 1.45
TRA2A-201ENST00000297071 MFAP1P55081 439 aaKnown RBP24.09■■□□□ 1.45
TRA2A-201ENST00000297071 A0A1W2PP64 1363 aa24.07■■□□□ 1.44
TRA2A-201ENST00000297071 PIK3R4Q99570 1358 aa24.07■■□□□ 1.44
TRA2A-201ENST00000297071 SKOR2Q2VWA4 1001 aaPredicted RBP24.07■■□□□ 1.44
TRA2A-201ENST00000297071 ITPRIPQ8IWB1 547 aa24.07■■□□□ 1.44
TRA2A-201ENST00000297071 BMP2KLQ5H9B9 411 aa24.06■■□□□ 1.44
TRA2A-201ENST00000297071 CHGAP10645 457 aaKnown RBP24.05■■□□□ 1.44
TRA2A-201ENST00000297071 TMEM132EQ6IEE7 984 aa24.05■■□□□ 1.44
TRA2A-201ENST00000297071 TSR2Q969E8 191 aaKnown RBP24.05■■□□□ 1.44
TRA2A-201ENST00000297071 NOB1Q9ULX3 412 aaKnown RBP24.05■■□□□ 1.44
TRA2A-201ENST00000297071 ARHGAP45Q92619 1136 aa24.04■■□□□ 1.44
TRA2A-201ENST00000297071 TMEM57Q8N5G2 664 aa24.03■■□□□ 1.44
TRA2A-201ENST00000297071 GCC1Q96CN9 775 aa24.03■■□□□ 1.44
TRA2A-201ENST00000297071 PTPRMP28827 1452 aa24.03■■□□□ 1.44
TRA2A-201ENST00000297071 CD163L1Q9NR16 1453 aa24.03■■□□□ 1.44
TRA2A-201ENST00000297071 PTCH1Q13635 1447 aa24.03■■□□□ 1.44
TRA2A-201ENST00000297071 GBP4Q96PP9 640 aa24.03■■□□□ 1.44
TRA2A-201ENST00000297071 LMTK3Q96Q04 1460 aa24.02■■□□□ 1.44
TRA2A-201ENST00000297071 CHD1LQ86WJ1 897 aa24.01■■□□□ 1.43
TRA2A-201ENST00000297071 CFAP44Q96MT7 982 aa24.01■■□□□ 1.43
TRA2A-201ENST00000297071 GRPEL1Q9HAV7 217 aa24.01■■□□□ 1.43
TRA2A-201ENST00000297071 MYO5BQ9ULV0 1848 aa24.01■■□□□ 1.43
TRA2A-201ENST00000297071 RAB3GAP1Q15042 981 aa24■■□□□ 1.43
TRA2A-201ENST00000297071 CLEC17AQ6ZS10 378 aa24■■□□□ 1.43
TRA2A-201ENST00000297071 TERF2IPQ9NYB0 399 aa24■■□□□ 1.43
TRA2A-201ENST00000297071 LRRC7Q96NW7 1537 aa23.99■■□□□ 1.43
TRA2A-201ENST00000297071 FAM135BQ49AJ0 1406 aa23.99■■□□□ 1.43
TRA2A-201ENST00000297071 FCHSD2O94868 740 aa23.98■■□□□ 1.43
TRA2A-201ENST00000297071 RIPK4P57078 832 aa23.98■■□□□ 1.43
TRA2A-201ENST00000297071 TMEM131LA2VDJ0 1609 aa23.98■■□□□ 1.43
TRA2A-201ENST00000297071 KIF24Q5T7B8 1368 aa23.98■■□□□ 1.43
TRA2A-201ENST00000297071 IBTKQ9P2D0 1353 aaPredicted RBP23.98■■□□□ 1.43
TRA2A-201ENST00000297071 DIAPH1O60610 1272 aaKnown RBP23.97■■□□□ 1.43
TRA2A-201ENST00000297071 CALD1Q05682 793 aaKnown RBP23.96■■□□□ 1.43
TRA2A-201ENST00000297071 U2SURPO15042 1029 aaKnown RBP23.96■■□□□ 1.43
TRA2A-201ENST00000297071 FYB1O15117 783 aa23.96■■□□□ 1.43
TRA2A-201ENST00000297071 CABP2Q9NPB3 220 aa23.96■■□□□ 1.43
TRA2A-201ENST00000297071 PREX1Q8TCU6 1659 aa23.95■■□□□ 1.42
TRA2A-201ENST00000297071 TNPO1Q92973 898 aaKnown RBP23.94■■□□□ 1.42
TRA2A-201ENST00000297071 PANK2Q9BZ23 570 aa23.94■■□□□ 1.42
TRA2A-201ENST00000297071 DIP2CQ9Y2E4 1556 aa23.94■■□□□ 1.42
TRA2A-201ENST00000297071 NEO1Q92859 1461 aa23.94■■□□□ 1.42
TRA2A-201ENST00000297071 MAP2P11137 1827 aaKnown RBP23.94■■□□□ 1.42
TRA2A-201ENST00000297071 SPRYD3Q8NCJ5 442 aa23.94■■□□□ 1.42
TRA2A-201ENST00000297071 SOCS7O14512 581 aa23.93■■□□□ 1.42
TRA2A-201ENST00000297071 SLC52A1Q9NWF4 448 aa23.93■■□□□ 1.42
TRA2A-201ENST00000297071 YEATS2Q9ULM3 1422 aa23.92■■□□□ 1.42
TRA2A-201ENST00000297071 ZBTB7BO15156 539 aaPredicted RBP23.92■■□□□ 1.42
TRA2A-201ENST00000297071 KIF2CQ99661 725 aa23.92■■□□□ 1.42
TRA2A-201ENST00000297071 ATP7BP35670 1465 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms