RNA–Protein interactions for RNA: ENST00000295057.3

LRRTM1-201, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM1, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-201ENST00000295057 ROBO2Q9HCK4 1378 aa19.66■□□□□ 0.74
LRRTM1-201ENST00000295057 NUTM2FA1L443 756 aa19.66■□□□□ 0.74
LRRTM1-201ENST00000295057 WASLO00401 505 aaPredicted RBP19.65■□□□□ 0.74
LRRTM1-201ENST00000295057 DLC1Q96QB1 1528 aa19.65■□□□□ 0.74
LRRTM1-201ENST00000295057 INSRP06213 1382 aa19.65■□□□□ 0.74
LRRTM1-201ENST00000295057 ADAMTSL3P82987 1691 aa19.64■□□□□ 0.74
LRRTM1-201ENST00000295057 POLR3AO14802 1390 aaPredicted RBP19.64■□□□□ 0.73
LRRTM1-201ENST00000295057 NLRP1Q9C000 1473 aa19.64■□□□□ 0.73
LRRTM1-201ENST00000295057 GLIPR1L2Q4G1C9 344 aa19.63■□□□□ 0.73
LRRTM1-201ENST00000295057 HDGFL2Q7Z4V5 671 aaPredicted RBP19.63■□□□□ 0.73
LRRTM1-201ENST00000295057 EID1Q9Y6B2 187 aa19.63■□□□□ 0.73
LRRTM1-201ENST00000295057 NINLQ9Y2I6 1382 aa19.62■□□□□ 0.73
LRRTM1-201ENST00000295057 SPINK5Q9NQ38 1064 aaPredicted RBP19.62■□□□□ 0.73
LRRTM1-201ENST00000295057 RRP7AQ9Y3A4 280 aaKnown RBP19.61■□□□□ 0.73
LRRTM1-201ENST00000295057 DMRT2Q9Y5R5 561 aa19.61■□□□□ 0.73
LRRTM1-201ENST00000295057 PLEKHG1Q9ULL1 1385 aa19.61■□□□□ 0.73
LRRTM1-201ENST00000295057 NEUROD2Q15784 382 aa19.61■□□□□ 0.73
LRRTM1-201ENST00000295057 NUDT16Q96DE0 195 aaKnown RBP19.61■□□□□ 0.73
LRRTM1-201ENST00000295057 USP32Q8NFA0 1604 aa19.61■□□□□ 0.73
LRRTM1-201ENST00000295057 USP19O94966 1318 aa19.61■□□□□ 0.73
LRRTM1-201ENST00000295057 PTPRUQ92729 1446 aa19.6■□□□□ 0.73
LRRTM1-201ENST00000295057 RRAGDQ9NQL2 400 aaPredicted RBP19.6■□□□□ 0.73
LRRTM1-201ENST00000295057 ZRANB1Q9UGI0 708 aa19.6■□□□□ 0.73
LRRTM1-201ENST00000295057 ZNF521Q96K83 1311 aa19.6■□□□□ 0.73
LRRTM1-201ENST00000295057 SEC24BO95487 1268 aa19.59■□□□□ 0.73
LRRTM1-201ENST00000295057 PRR36Q9H6K5 1346 aa19.58■□□□□ 0.73
LRRTM1-201ENST00000295057 NSD2O96028 1365 aa19.58■□□□□ 0.73
LRRTM1-201ENST00000295057 PPIP5K1Q6PFW1 1433 aa19.58■□□□□ 0.73
LRRTM1-201ENST00000295057 THEMISQ8N1K5 641 aaPredicted RBP19.58■□□□□ 0.72
LRRTM1-201ENST00000295057 SLKQ9H2G2 1235 aaPredicted RBP19.57■□□□□ 0.72
LRRTM1-201ENST00000295057 AMOTL2Q9Y2J4 779 aa19.57■□□□□ 0.72
LRRTM1-201ENST00000295057 TECPR2O15040 1411 aa19.57■□□□□ 0.72
LRRTM1-201ENST00000295057 GOLGA2Q08379 1002 aa19.57■□□□□ 0.72
LRRTM1-201ENST00000295057 FAM135BQ49AJ0 1406 aa19.56■□□□□ 0.72
LRRTM1-201ENST00000295057 IGHDP01880 384 aa19.56■□□□□ 0.72
LRRTM1-201ENST00000295057 NME9Q86XW9 330 aa19.56■□□□□ 0.72
LRRTM1-201ENST00000295057 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.56■□□□□ 0.72
LRRTM1-201ENST00000295057 CFAP53Q96M91 514 aa19.56■□□□□ 0.72
LRRTM1-201ENST00000295057 SHPRHQ149N8 1683 aa19.56■□□□□ 0.72
LRRTM1-201ENST00000295057 RIMS1Q86UR5 1692 aaKnown RBP19.55■□□□□ 0.72
LRRTM1-201ENST00000295057 U2AF1L5P0DN76 240 aaPredicted RBP19.55■□□□□ 0.72
LRRTM1-201ENST00000295057 U2AF1Q01081 240 aaKnown RBP eCLIP19.55■□□□□ 0.72
LRRTM1-201ENST00000295057 BCAR3O75815 825 aa19.54■□□□□ 0.72
LRRTM1-201ENST00000295057 SIRT1Q96EB6 747 aa19.54■□□□□ 0.72
LRRTM1-201ENST00000295057 ARXQ96QS3 562 aa19.54■□□□□ 0.72
LRRTM1-201ENST00000295057 CCDC61Q9Y6R9 512 aa19.54■□□□□ 0.72
LRRTM1-201ENST00000295057 MED14O60244 1454 aa19.53■□□□□ 0.72
LRRTM1-201ENST00000295057 ARHGAP23Q9P227 1491 aa19.53■□□□□ 0.72
LRRTM1-201ENST00000295057 U2SURPO15042 1029 aaKnown RBP19.53■□□□□ 0.72
LRRTM1-201ENST00000295057 SLIT1O75093 1534 aa19.53■□□□□ 0.72
LRRTM1-201ENST00000295057 CPS1P31327 1500 aa19.53■□□□□ 0.72
LRRTM1-201ENST00000295057 SLFN5Q08AF3 891 aa19.52■□□□□ 0.72
LRRTM1-201ENST00000295057 TCP11L2Q8N4U5 519 aa19.52■□□□□ 0.72
LRRTM1-201ENST00000295057 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.51■□□□□ 0.71
LRRTM1-201ENST00000295057 RUNDC1Q96C34 613 aa19.51■□□□□ 0.71
LRRTM1-201ENST00000295057 RBM33Q96EV2 1170 aaKnown RBP19.5■□□□□ 0.71
LRRTM1-201ENST00000295057 TBX22Q9Y458 520 aa19.5■□□□□ 0.71
LRRTM1-201ENST00000295057 KNDC1Q76NI1 1749 aa19.5■□□□□ 0.71
LRRTM1-201ENST00000295057 ZMYND15Q9H091 742 aa19.5■□□□□ 0.71
LRRTM1-201ENST00000295057 CPSF1Q10570 1443 aaKnown RBP19.5■□□□□ 0.71
LRRTM1-201ENST00000295057 ATP7BP35670 1465 aa19.5■□□□□ 0.71
LRRTM1-201ENST00000295057 WWC1Q8IX03 1113 aa19.49■□□□□ 0.71
LRRTM1-201ENST00000295057 VIRMAQ69YN4 1812 aaKnown RBP19.49■□□□□ 0.71
LRRTM1-201ENST00000295057 VSIG10Q8N0Z9 540 aa19.48■□□□□ 0.71
LRRTM1-201ENST00000295057 KCNA6P17658 529 aa19.47■□□□□ 0.71
LRRTM1-201ENST00000295057 POLKQ9UBT6 870 aa19.47■□□□□ 0.71
LRRTM1-201ENST00000295057 EMILIN1Q9Y6C2 1016 aa19.47■□□□□ 0.71
LRRTM1-201ENST00000295057 PMFBP1Q8TBY8 1022 aa19.46■□□□□ 0.71
LRRTM1-201ENST00000295057 TRMT2AQ8IZ69 625 aaKnown RBP19.46■□□□□ 0.71
LRRTM1-201ENST00000295057 ANTXR1Q9H6X2 564 aa19.45■□□□□ 0.7
LRRTM1-201ENST00000295057 CEP170BQ9Y4F5 1589 aaPredicted RBP19.45■□□□□ 0.7
LRRTM1-201ENST00000295057 BECN1Q14457 450 aa19.45■□□□□ 0.7
LRRTM1-201ENST00000295057 ACEP12821 1306 aa19.45■□□□□ 0.7
LRRTM1-201ENST00000295057 COL3A1P02461 1466 aaPredicted RBP19.44■□□□□ 0.7
LRRTM1-201ENST00000295057 RRS1Q15050 365 aaKnown RBP19.44■□□□□ 0.7
LRRTM1-201ENST00000295057 EDC4Q6P2E9 1401 aaKnown RBP19.44■□□□□ 0.7
LRRTM1-201ENST00000295057 L1TD1Q5T7N2 865 aaKnown RBP19.43■□□□□ 0.7
LRRTM1-201ENST00000295057 DIAPH1O60610 1272 aaKnown RBP19.43■□□□□ 0.7
LRRTM1-201ENST00000295057 KIF20BQ96Q89 1820 aa19.43■□□□□ 0.7
LRRTM1-201ENST00000295057 NKTRP30414 1462 aaKnown RBP19.42■□□□□ 0.7
LRRTM1-201ENST00000295057 CDC42BPGQ6DT37 1551 aa19.42■□□□□ 0.7
LRRTM1-201ENST00000295057 E9PSI1 815 aa19.42■□□□□ 0.7
LRRTM1-201ENST00000295057 ANKRD26Q9UPS8 1709 aa19.42■□□□□ 0.7
LRRTM1-201ENST00000295057 SOX12O15370 315 aa19.41■□□□□ 0.7
LRRTM1-201ENST00000295057 XRCC6P12956 609 aaKnown RBP eCLIP19.41■□□□□ 0.7
LRRTM1-201ENST00000295057 PANK1Q8TE04 598 aa19.41■□□□□ 0.7
LRRTM1-201ENST00000295057 PLEKHF1Q96S99 279 aa19.41■□□□□ 0.7
LRRTM1-201ENST00000295057 IQSEC2Q5JU85 1478 aa19.41■□□□□ 0.7
LRRTM1-201ENST00000295057 ZNF142P52746 1687 aaPredicted RBP19.41■□□□□ 0.7
LRRTM1-201ENST00000295057 COG6Q9Y2V7 657 aa19.41■□□□□ 0.7
LRRTM1-201ENST00000295057 SPRYD3Q8NCJ5 442 aa19.4■□□□□ 0.7
LRRTM1-201ENST00000295057 COG3Q96JB2 828 aa19.4■□□□□ 0.7
LRRTM1-201ENST00000295057 PANK2Q9BZ23 570 aa19.4■□□□□ 0.7
LRRTM1-201ENST00000295057 ANKLE2Q86XL3 938 aa19.4■□□□□ 0.7
LRRTM1-201ENST00000295057 GZF1Q9H116 711 aaPredicted RBP19.39■□□□□ 0.7
LRRTM1-201ENST00000295057 PNPLA6Q8IY17 1366 aa19.39■□□□□ 0.7
LRRTM1-201ENST00000295057 HMOX1P09601 288 aa19.39■□□□□ 0.69
LRRTM1-201ENST00000295057 CLUAP1Q96AJ1 413 aa19.39■□□□□ 0.69
LRRTM1-201ENST00000295057 ZNF692Q9BU19 519 aaPredicted RBP19.39■□□□□ 0.69
LRRTM1-201ENST00000295057 TBC1D2Q9BYX2 928 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms