RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 SSH1Q8WYL5 1049 aa16.8■□□□□ 0.28
SLC28A1-201ENST00000286749 GGNBP2Q9H3C7 697 aa16.8■□□□□ 0.28
SLC28A1-201ENST00000286749 TRIM35Q9UPQ4 493 aa16.8■□□□□ 0.28
SLC28A1-201ENST00000286749 ITPRIPQ8IWB1 547 aa16.8■□□□□ 0.28
SLC28A1-201ENST00000286749 SPRYD3Q8NCJ5 442 aa16.8■□□□□ 0.28
SLC28A1-201ENST00000286749 COL3A1P02461 1466 aaPredicted RBP16.79■□□□□ 0.28
SLC28A1-201ENST00000286749 ANKRD26Q9UPS8 1709 aa16.79■□□□□ 0.28
SLC28A1-201ENST00000286749 STK26Q9P289 416 aa16.79■□□□□ 0.28
SLC28A1-201ENST00000286749 SRPK2P78362 688 aaKnown RBP16.78■□□□□ 0.28
SLC28A1-201ENST00000286749 MFAP1P55081 439 aaKnown RBP16.78■□□□□ 0.28
SLC28A1-201ENST00000286749 MYO5BQ9ULV0 1848 aa16.77■□□□□ 0.28
SLC28A1-201ENST00000286749 HDAC1Q13547 482 aaPredicted RBP16.77■□□□□ 0.28
SLC28A1-201ENST00000286749 ATF7IPQ6VMQ6 1270 aa16.77■□□□□ 0.28
SLC28A1-201ENST00000286749 C22orf23Q9BZE7 217 aa16.77■□□□□ 0.28
SLC28A1-201ENST00000286749 DDX19BQ9UMR2 479 aa16.77■□□□□ 0.28
SLC28A1-201ENST00000286749 NOB1Q9ULX3 412 aaKnown RBP16.77■□□□□ 0.27
SLC28A1-201ENST00000286749 TMEM57Q8N5G2 664 aa16.75■□□□□ 0.27
SLC28A1-201ENST00000286749 NPM1P06748 294 aaKnown RBP eCLIP16.74■□□□□ 0.27
SLC28A1-201ENST00000286749 RIPK4P57078 832 aa16.74■□□□□ 0.27
SLC28A1-201ENST00000286749 FAM43AQ8N2R8 423 aa16.74■□□□□ 0.27
SLC28A1-201ENST00000286749 FYB1O15117 783 aa16.73■□□□□ 0.27
SLC28A1-201ENST00000286749 IL16Q14005 1332 aa16.73■□□□□ 0.27
SLC28A1-201ENST00000286749 IDI1Q13907 227 aa16.73■□□□□ 0.27
SLC28A1-201ENST00000286749 SMC5Q8IY18 1101 aa16.73■□□□□ 0.27
SLC28A1-201ENST00000286749 MINK1Q8N4C8 1332 aaPredicted RBP16.73■□□□□ 0.27
SLC28A1-201ENST00000286749 CD163L1Q9NR16 1453 aa16.72■□□□□ 0.27
SLC28A1-201ENST00000286749 PTPRMP28827 1452 aa16.71■□□□□ 0.27
SLC28A1-201ENST00000286749 L1TD1Q5T7N2 865 aaKnown RBP16.71■□□□□ 0.27
SLC28A1-201ENST00000286749 ZBTB40Q9NUA8 1239 aa16.71■□□□□ 0.27
SLC28A1-201ENST00000286749 TERF2IPQ9NYB0 399 aa16.71■□□□□ 0.27
SLC28A1-201ENST00000286749 RAPGEF3O95398 923 aa16.71■□□□□ 0.27
SLC28A1-201ENST00000286749 KIF20BQ96Q89 1820 aa16.71■□□□□ 0.26
SLC28A1-201ENST00000286749 ATAD2Q6PL18 1390 aa16.71■□□□□ 0.26
SLC28A1-201ENST00000286749 CLTCQ00610 1675 aaKnown RBP16.7■□□□□ 0.26
SLC28A1-201ENST00000286749 DIAPH1O60610 1272 aaKnown RBP16.7■□□□□ 0.26
SLC28A1-201ENST00000286749 MCM4P33991 863 aa16.7■□□□□ 0.26
SLC28A1-201ENST00000286749 DIP2CQ9Y2E4 1556 aa16.7■□□□□ 0.26
SLC28A1-201ENST00000286749 KIF16BQ96L93 1317 aa16.7■□□□□ 0.26
SLC28A1-201ENST00000286749 PRAM1Q96QH2 718 aa16.7■□□□□ 0.26
SLC28A1-201ENST00000286749 ARXQ96QS3 562 aa16.7■□□□□ 0.26
SLC28A1-201ENST00000286749 MED14O60244 1454 aa16.7■□□□□ 0.26
SLC28A1-201ENST00000286749 CHMP5Q9NZZ3 219 aa16.69■□□□□ 0.26
SLC28A1-201ENST00000286749 ZFYVE9O95405 1425 aa16.69■□□□□ 0.26
SLC28A1-201ENST00000286749 IPO8O15397 1037 aaKnown RBP16.68■□□□□ 0.26
SLC28A1-201ENST00000286749 LRRC7Q96NW7 1537 aa16.68■□□□□ 0.26
SLC28A1-201ENST00000286749 ARHGAP31Q2M1Z3 1444 aa16.68■□□□□ 0.26
SLC28A1-201ENST00000286749 GZF1Q9H116 711 aaPredicted RBP16.67■□□□□ 0.26
SLC28A1-201ENST00000286749 NUCB1Q02818 461 aa16.67■□□□□ 0.26
SLC28A1-201ENST00000286749 HSCBQ8IWL3 235 aa16.67■□□□□ 0.26
SLC28A1-201ENST00000286749 TMEM131LA2VDJ0 1609 aa16.67■□□□□ 0.26
SLC28A1-201ENST00000286749 LNPKQ9C0E8 428 aa16.66■□□□□ 0.26
SLC28A1-201ENST00000286749 YTHDC2Q9H6S0 1430 aaKnown RBP16.66■□□□□ 0.26
SLC28A1-201ENST00000286749 PNPLA6Q8IY17 1366 aa16.66■□□□□ 0.26
SLC28A1-201ENST00000286749 PREX1Q8TCU6 1659 aa16.66■□□□□ 0.26
SLC28A1-201ENST00000286749 ALDH1L2Q3SY69 923 aa16.66■□□□□ 0.26
SLC28A1-201ENST00000286749 HDGFL2Q7Z4V5 671 aaPredicted RBP16.66■□□□□ 0.26
SLC28A1-201ENST00000286749 PNNQ9H307 717 aaKnown RBP16.66■□□□□ 0.26
SLC28A1-201ENST00000286749 SLC52A1Q9NWF4 448 aa16.65■□□□□ 0.26
SLC28A1-201ENST00000286749 GOLGA6L3A6NEY3 463 aa16.65■□□□□ 0.26
SLC28A1-201ENST00000286749 CDC42BPGQ6DT37 1551 aa16.64■□□□□ 0.25
SLC28A1-201ENST00000286749 XRCC6P12956 609 aaKnown RBP eCLIP16.64■□□□□ 0.25
SLC28A1-201ENST00000286749 PRKAR2BP31323 418 aa16.64■□□□□ 0.25
SLC28A1-201ENST00000286749 CHD1LQ86WJ1 897 aa16.64■□□□□ 0.25
SLC28A1-201ENST00000286749 TRAK2O60296 914 aa16.63■□□□□ 0.25
SLC28A1-201ENST00000286749 FCHSD2O94868 740 aa16.63■□□□□ 0.25
SLC28A1-201ENST00000286749 CDK19Q9BWU1 502 aa16.63■□□□□ 0.25
SLC28A1-201ENST00000286749 CABP1Q9NZU7 370 aa16.63■□□□□ 0.25
SLC28A1-201ENST00000286749 NEO1Q92859 1461 aa16.63■□□□□ 0.25
SLC28A1-201ENST00000286749 FSD2A1L4K1 749 aa16.63■□□□□ 0.25
SLC28A1-201ENST00000286749 FBLN1P23142 703 aa16.63■□□□□ 0.25
SLC28A1-201ENST00000286749 ZNF692Q9BU19 519 aaPredicted RBP16.63■□□□□ 0.25
SLC28A1-201ENST00000286749 FAM135BQ49AJ0 1406 aa16.62■□□□□ 0.25
SLC28A1-201ENST00000286749 RBM25P49756 843 aaKnown RBP16.62■□□□□ 0.25
SLC28A1-201ENST00000286749 RSPH6AQ9H0K4 717 aa16.62■□□□□ 0.25
SLC28A1-201ENST00000286749 RRAGDQ9NQL2 400 aaPredicted RBP16.62■□□□□ 0.25
SLC28A1-201ENST00000286749 MAP2P11137 1827 aaKnown RBP16.62■□□□□ 0.25
SLC28A1-201ENST00000286749 NCOA3Q9Y6Q9 1424 aa16.62■□□□□ 0.25
SLC28A1-201ENST00000286749 RICTORQ6R327 1708 aa16.61■□□□□ 0.25
SLC28A1-201ENST00000286749 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.61■□□□□ 0.25
SLC28A1-201ENST00000286749 EIF5BO60841 1220 aaKnown RBP16.61■□□□□ 0.25
SLC28A1-201ENST00000286749 THUMPD2Q9BTF0 503 aaKnown RBP16.61■□□□□ 0.25
SLC28A1-201ENST00000286749 ARHGEF40Q8TER5 1519 aa16.61■□□□□ 0.25
SLC28A1-201ENST00000286749 PANK2Q9BZ23 570 aa16.6■□□□□ 0.25
SLC28A1-201ENST00000286749 C1orf115Q9H7X2 142 aa16.6■□□□□ 0.25
SLC28A1-201ENST00000286749 PPIP5K1Q6PFW1 1433 aa16.6■□□□□ 0.25
SLC28A1-201ENST00000286749 ALKQ9UM73 1620 aa16.6■□□□□ 0.25
SLC28A1-201ENST00000286749 YEATS2Q9ULM3 1422 aa16.59■□□□□ 0.25
SLC28A1-201ENST00000286749 HMOX1P09601 288 aa16.59■□□□□ 0.25
SLC28A1-201ENST00000286749 ANKRD45Q5TZF3 282 aa16.59■□□□□ 0.25
SLC28A1-201ENST00000286749 PHACTR3Q96KR7 559 aa16.59■□□□□ 0.25
SLC28A1-201ENST00000286749 POLKQ9UBT6 870 aa16.59■□□□□ 0.25
SLC28A1-201ENST00000286749 PRKCSHP14314 528 aaPredicted RBP16.59■□□□□ 0.25
SLC28A1-201ENST00000286749 DDIT3P35638 169 aa16.59■□□□□ 0.25
SLC28A1-201ENST00000286749 BMP2KLQ5H9B9 411 aa16.59■□□□□ 0.25
SLC28A1-201ENST00000286749 SNX21Q969T3 373 aa16.59■□□□□ 0.25
SLC28A1-201ENST00000286749 ZBTB7BO15156 539 aaPredicted RBP16.58■□□□□ 0.25
SLC28A1-201ENST00000286749 BRPF1P55201 1214 aaPredicted RBP16.58■□□□□ 0.25
SLC28A1-201ENST00000286749 ZNF428Q96B54 188 aa16.58■□□□□ 0.25
SLC28A1-201ENST00000286749 DDX11L8A8MPP1 907 aa16.58■□□□□ 0.24
SLC28A1-201ENST00000286749 MRPL50Q8N5N7 158 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms