RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 FAM210AQ96ND0 272 aa10.78□□□□□ -0.68
CTDSPL-201ENST00000273179 PAF1Q8N7H5 531 aa10.78□□□□□ -0.68
CTDSPL-201ENST00000273179 KIF1CO43896 1103 aaKnown RBP10.77□□□□□ -0.68
CTDSPL-201ENST00000273179 ERCC3P19447 782 aa10.77□□□□□ -0.68
CTDSPL-201ENST00000273179 DZIP1Q86YF9 867 aaKnown RBP10.77□□□□□ -0.68
CTDSPL-201ENST00000273179 RDXP35241 583 aaKnown RBP10.77□□□□□ -0.69
CTDSPL-201ENST00000273179 TMX1Q9H3N1 280 aa10.77□□□□□ -0.69
CTDSPL-201ENST00000273179 KDM4CQ9H3R0 1056 aa10.77□□□□□ -0.69
CTDSPL-201ENST00000273179 BSDC1Q9NW68 430 aaPredicted RBP10.77□□□□□ -0.69
CTDSPL-201ENST00000273179 FAM160A1Q05DH4 1040 aa10.76□□□□□ -0.69
CTDSPL-201ENST00000273179 KCNA1Q09470 495 aa10.76□□□□□ -0.69
CTDSPL-201ENST00000273179 SPOCK3Q9BQ16 436 aa10.76□□□□□ -0.69
CTDSPL-201ENST00000273179 CT47A1Q5JQC4 288 aaPredicted RBP10.76□□□□□ -0.69
CTDSPL-201ENST00000273179 AP1ARQ63HQ0 302 aa10.76□□□□□ -0.69
CTDSPL-201ENST00000273179 FEZ2Q9UHY8 353 aaPredicted RBP10.76□□□□□ -0.69
CTDSPL-201ENST00000273179 FAM161AQ3B820 660 aa10.75□□□□□ -0.69
CTDSPL-201ENST00000273179 DHX57Q6P158 1386 aaKnown RBP10.75□□□□□ -0.69
CTDSPL-201ENST00000273179 ZNF608Q9ULD9 1512 aaPredicted RBP10.75□□□□□ -0.69
CTDSPL-201ENST00000273179 U2AF1L5P0DN76 240 aaPredicted RBP10.75□□□□□ -0.69
CTDSPL-201ENST00000273179 U2AF1Q01081 240 aaKnown RBP eCLIP10.75□□□□□ -0.69
CTDSPL-201ENST00000273179 CEP89Q96ST8 783 aa10.75□□□□□ -0.69
CTDSPL-201ENST00000273179 NUB1Q9Y5A7 615 aa10.75□□□□□ -0.69
CTDSPL-201ENST00000273179 MAP4K4O95819 1239 aaPredicted RBP10.74□□□□□ -0.69
CTDSPL-201ENST00000273179 VTI1AQ96AJ9 217 aa10.74□□□□□ -0.69
CTDSPL-201ENST00000273179 PCF11O94913 1555 aaKnown RBP10.74□□□□□ -0.69
CTDSPL-201ENST00000273179 ABCD1P33897 745 aa10.74□□□□□ -0.69
CTDSPL-201ENST00000273179 RSPH14Q9UHP6 348 aa10.74□□□□□ -0.69
CTDSPL-201ENST00000273179 SIN3AQ96ST3 1273 aa10.74□□□□□ -0.69
CTDSPL-201ENST00000273179 LMNB1P20700 586 aa10.74□□□□□ -0.69
CTDSPL-201ENST00000273179 ERCC4Q92889 916 aaPredicted RBP10.74□□□□□ -0.69
CTDSPL-201ENST00000273179 MECOMQ03112 1051 aa10.73□□□□□ -0.69
CTDSPL-201ENST00000273179 NEXNQ0ZGT2 675 aa10.73□□□□□ -0.69
CTDSPL-201ENST00000273179 MTA1Q13330 715 aa10.73□□□□□ -0.69
CTDSPL-201ENST00000273179 LRRC9Q6ZRR7 1453 aa10.73□□□□□ -0.69
CTDSPL-201ENST00000273179 MAP2K2P36507 400 aa10.73□□□□□ -0.69
CTDSPL-201ENST00000273179 SMAPO00193 183 aa10.73□□□□□ -0.69
CTDSPL-201ENST00000273179 CREB3O43889 395 aa10.73□□□□□ -0.69
CTDSPL-201ENST00000273179 HMMRO75330 724 aa10.72□□□□□ -0.69
CTDSPL-201ENST00000273179 CTAGE5O15320 804 aa10.72□□□□□ -0.69
CTDSPL-201ENST00000273179 SRPK2P78362 688 aaKnown RBP10.72□□□□□ -0.69
CTDSPL-201ENST00000273179 B4GALNT3Q6L9W6 998 aa10.72□□□□□ -0.69
CTDSPL-201ENST00000273179 C16orf87Q6PH81 154 aa10.72□□□□□ -0.69
CTDSPL-201ENST00000273179 CHIC2Q9UKJ5 165 aa10.72□□□□□ -0.69
CTDSPL-201ENST00000273179 RHBDL3P58872 404 aa10.72□□□□□ -0.69
CTDSPL-201ENST00000273179 RAB3GAP2Q9H2M9 1393 aa10.72□□□□□ -0.69
CTDSPL-201ENST00000273179 TIAM1Q13009 1591 aa10.72□□□□□ -0.69
CTDSPL-201ENST00000273179 FMN1Q68DA7 1419 aa10.72□□□□□ -0.69
CTDSPL-201ENST00000273179 RRBP1Q9P2E9 1410 aaKnown RBP10.72□□□□□ -0.69
CTDSPL-201ENST00000273179 KIF5CO60282 957 aa10.72□□□□□ -0.69
CTDSPL-201ENST00000273179 NUTM2GQ5VZR2 741 aa10.72□□□□□ -0.69
CTDSPL-201ENST00000273179 ITFG2Q969R8 447 aa10.72□□□□□ -0.69
CTDSPL-201ENST00000273179 CHCHD3Q9NX63 227 aaKnown RBP10.72□□□□□ -0.69
CTDSPL-201ENST00000273179 TPX2Q9ULW0 747 aaKnown RBP10.71□□□□□ -0.69
CTDSPL-201ENST00000273179 DYNC1I1O14576 645 aa10.71□□□□□ -0.69
CTDSPL-201ENST00000273179 CHGAP10645 457 aaKnown RBP10.71□□□□□ -0.69
CTDSPL-201ENST00000273179 SLC20A2Q08357 652 aa10.71□□□□□ -0.69
CTDSPL-201ENST00000273179 RASSF4Q9H2L5 321 aa10.71□□□□□ -0.69
CTDSPL-201ENST00000273179 GIMAP7Q8NHV1 300 aa10.7□□□□□ -0.7
CTDSPL-201ENST00000273179 ERCC6Q03468 1493 aa10.7□□□□□ -0.7
CTDSPL-201ENST00000273179 RAB11FIP3O75154 756 aa10.7□□□□□ -0.7
CTDSPL-201ENST00000273179 ATP6V1AP38606 617 aa10.7□□□□□ -0.7
CTDSPL-201ENST00000273179 GPS2Q13227 327 aa10.7□□□□□ -0.7
CTDSPL-201ENST00000273179 TRIM29Q14134 588 aa10.7□□□□□ -0.7
CTDSPL-201ENST00000273179 CC2D1AQ6P1N0 951 aaPredicted RBP10.7□□□□□ -0.7
CTDSPL-201ENST00000273179 DRC1Q96MC2 740 aa10.7□□□□□ -0.7
CTDSPL-201ENST00000273179 SETD5Q9C0A6 1442 aa10.7□□□□□ -0.7
CTDSPL-201ENST00000273179 DDX46Q7L014 1031 aaKnown RBP10.7□□□□□ -0.7
CTDSPL-201ENST00000273179 RPUSD2Q8IZ73 545 aaKnown RBP10.7□□□□□ -0.7
CTDSPL-201ENST00000273179 TRIML1Q8N9V2 468 aa10.7□□□□□ -0.7
CTDSPL-201ENST00000273179 BIN2Q9UBW5 565 aaPredicted RBP10.7□□□□□ -0.7
CTDSPL-201ENST00000273179 MS4A1P11836 297 aa10.69□□□□□ -0.7
CTDSPL-201ENST00000273179 BRMS1Q9HCU9 246 aa10.69□□□□□ -0.7
CTDSPL-201ENST00000273179 GABBR1Q9UBS5 961 aa10.69□□□□□ -0.7
CTDSPL-201ENST00000273179 NBPF7P0C2Y1 421 aaPredicted RBP10.69□□□□□ -0.7
CTDSPL-201ENST00000273179 DYTNA2CJ06 578 aa10.68□□□□□ -0.7
CTDSPL-201ENST00000273179 CA8P35219 290 aa10.68□□□□□ -0.7
CTDSPL-201ENST00000273179 KIF2CQ99661 725 aa10.68□□□□□ -0.7
CTDSPL-201ENST00000273179 SLC24A3Q9HC58 644 aa10.68□□□□□ -0.7
CTDSPL-201ENST00000273179 USP25Q9UHP3 1055 aa10.68□□□□□ -0.7
CTDSPL-201ENST00000273179 SUFUQ9UMX1 484 aa10.68□□□□□ -0.7
CTDSPL-201ENST00000273179 IQSEC3Q9UPP2 1182 aaPredicted RBP10.68□□□□□ -0.7
CTDSPL-201ENST00000273179 PPP1R12AO14974 1030 aaPredicted RBP10.68□□□□□ -0.7
CTDSPL-201ENST00000273179 ANKRD20A12PQ8NF67 263 aa10.68□□□□□ -0.7
CTDSPL-201ENST00000273179 ARL10Q8N8L6 244 aa10.68□□□□□ -0.7
CTDSPL-201ENST00000273179 DDX10Q13206 875 aaKnown RBP10.68□□□□□ -0.7
CTDSPL-201ENST00000273179 KCNV2Q8TDN2 545 aa10.68□□□□□ -0.7
CTDSPL-201ENST00000273179 FAM212AQ96EL1 285 aa10.68□□□□□ -0.7
CTDSPL-201ENST00000273179 HSPA5P11021 654 aaKnown RBP10.67□□□□□ -0.7
CTDSPL-201ENST00000273179 ZNF777Q9ULD5 760 aaPredicted RBP10.67□□□□□ -0.7
CTDSPL-201ENST00000273179 KIF3CO14782 793 aa10.67□□□□□ -0.7
CTDSPL-201ENST00000273179 ABCA5Q8WWZ7 1642 aa10.67□□□□□ -0.7
CTDSPL-201ENST00000273179 TSPY4P0CV99 314 aa10.67□□□□□ -0.7
CTDSPL-201ENST00000273179 TSPY10P0CW01 314 aa10.67□□□□□ -0.7
CTDSPL-201ENST00000273179 PAX7P23759 505 aa10.67□□□□□ -0.7
CTDSPL-201ENST00000273179 MLECQ14165 292 aa10.67□□□□□ -0.7
CTDSPL-201ENST00000273179 DNAI2Q9GZS0 605 aa10.67□□□□□ -0.7
CTDSPL-201ENST00000273179 CAND2O75155 1236 aa10.66□□□□□ -0.7
CTDSPL-201ENST00000273179 ECM2O94769 699 aaPredicted RBP10.66□□□□□ -0.7
CTDSPL-201ENST00000273179 SHTN1A0MZ66 631 aa10.66□□□□□ -0.7
CTDSPL-201ENST00000273179 ICE2Q659A1 982 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms