RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 FBXO3Q9UK99 471 aa6.8□□□□□ -1.32
VCAN-201ENST00000265077 SMC3Q9UQE7 1217 aa6.8□□□□□ -1.32
VCAN-201ENST00000265077 KIF3BO15066 747 aa6.8□□□□□ -1.32
VCAN-201ENST00000265077 HSP90AB4PQ58FF6 505 aa6.8□□□□□ -1.32
VCAN-201ENST00000265077 TTLL5Q6EMB2 1281 aa6.8□□□□□ -1.32
VCAN-201ENST00000265077 ERCC4Q92889 916 aaPredicted RBP6.8□□□□□ -1.32
VCAN-201ENST00000265077 CPLX1O14810 134 aa6.8□□□□□ -1.32
VCAN-201ENST00000265077 CT47B1P0C2W7 299 aaPredicted RBP6.8□□□□□ -1.32
VCAN-201ENST00000265077 GABPB1Q06547 395 aaPredicted RBP6.8□□□□□ -1.32
VCAN-201ENST00000265077 TOP2BQ02880 1626 aa6.79□□□□□ -1.32
VCAN-201ENST00000265077 ERC2O15083 957 aa6.79□□□□□ -1.32
VCAN-201ENST00000265077 LIG1P18858 919 aa6.79□□□□□ -1.32
VCAN-201ENST00000265077 TMX4Q9H1E5 349 aaPredicted RBP6.79□□□□□ -1.32
VCAN-201ENST00000265077 TRIM29Q14134 588 aa6.79□□□□□ -1.32
VCAN-201ENST00000265077 TTC31Q49AM3 519 aaPredicted RBP6.79□□□□□ -1.32
VCAN-201ENST00000265077 CCDC47Q96A33 483 aaKnown RBP6.79□□□□□ -1.32
VCAN-201ENST00000265077 PLEKHH2Q8IVE3 1493 aa6.79□□□□□ -1.32
VCAN-201ENST00000265077 ANO2Q9NQ90 1003 aa6.79□□□□□ -1.32
VCAN-201ENST00000265077 CIZ1Q9ULV3 898 aaPredicted RBP6.79□□□□□ -1.32
VCAN-201ENST00000265077 APAF1O14727 1248 aa6.79□□□□□ -1.32
VCAN-201ENST00000265077 RUFY1Q96T51 708 aa6.79□□□□□ -1.32
VCAN-201ENST00000265077 GNAI1P63096 354 aa6.79□□□□□ -1.32
VCAN-201ENST00000265077 MEX3CQ5U5Q3 659 aaKnown RBP6.79□□□□□ -1.32
VCAN-201ENST00000265077 NEXNQ0ZGT2 675 aa6.79□□□□□ -1.32
VCAN-201ENST00000265077 BICD2Q8TD16 824 aa6.79□□□□□ -1.32
VCAN-201ENST00000265077 GAPVD1Q14C86 1478 aa6.79□□□□□ -1.32
VCAN-201ENST00000265077 SECISBP2LQ93073 1101 aaKnown RBP6.79□□□□□ -1.32
VCAN-201ENST00000265077 CWC22Q9HCG8 908 aaKnown RBP6.78□□□□□ -1.32
VCAN-201ENST00000265077 TRAK1Q9UPV9 953 aa6.78□□□□□ -1.32
VCAN-201ENST00000265077 TIAM1Q13009 1591 aa6.78□□□□□ -1.32
VCAN-201ENST00000265077 MYO10Q9HD67 2058 aa6.78□□□□□ -1.32
VCAN-201ENST00000265077 HNRNPMP52272 730 aaKnown RBP eCLIP6.78□□□□□ -1.32
VCAN-201ENST00000265077 LRCH2Q5VUJ6 765 aa6.78□□□□□ -1.32
VCAN-201ENST00000265077 EIF3JO75822 258 aaKnown RBP6.78□□□□□ -1.32
VCAN-201ENST00000265077 CSB-PGBD3P0DP91 1061 aa6.78□□□□□ -1.32
VCAN-201ENST00000265077 HS1BP3Q53T59 392 aa6.78□□□□□ -1.32
VCAN-201ENST00000265077 OGFRQ9NZT2 677 aa6.78□□□□□ -1.32
VCAN-201ENST00000265077 CPSF2Q9P2I0 782 aaKnown RBP6.78□□□□□ -1.32
VCAN-201ENST00000265077 TMCO5BA8MYB1 307 aa6.78□□□□□ -1.32
VCAN-201ENST00000265077 IFIT2P09913 472 aaKnown RBP6.78□□□□□ -1.32
VCAN-201ENST00000265077 FANCD2Q9BXW9 1451 aa6.78□□□□□ -1.32
VCAN-201ENST00000265077 TRDNQ13061 729 aa6.78□□□□□ -1.32
VCAN-201ENST00000265077 RIPK4P57078 832 aa6.78□□□□□ -1.32
VCAN-201ENST00000265077 C9orf78Q9NZ63 289 aaPredicted RBP6.78□□□□□ -1.32
VCAN-201ENST00000265077 FOXD4L6Q3SYB3 417 aaPredicted RBP6.78□□□□□ -1.32
VCAN-201ENST00000265077 FOXD4L3Q6VB84 417 aaPredicted RBP6.78□□□□□ -1.32
VCAN-201ENST00000265077 DCTN1Q14203 1278 aa6.77□□□□□ -1.32
VCAN-201ENST00000265077 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.77□□□□□ -1.32
VCAN-201ENST00000265077 ANKRD50Q9ULJ7 1429 aa6.77□□□□□ -1.32
VCAN-201ENST00000265077 RRP12Q5JTH9 1297 aaKnown RBP6.77□□□□□ -1.33
VCAN-201ENST00000265077 DNAAF4Q8WXU2 420 aa6.77□□□□□ -1.33
VCAN-201ENST00000265077 SAFBQ15424 915 aaKnown RBP eCLIP6.77□□□□□ -1.33
VCAN-201ENST00000265077 C1orf141Q5JVX7 400 aa6.77□□□□□ -1.33
VCAN-201ENST00000265077 PANK2Q9BZ23 570 aa6.77□□□□□ -1.33
VCAN-201ENST00000265077 ARID4AP29374 1257 aaPredicted RBP6.77□□□□□ -1.33
VCAN-201ENST00000265077 IVLP07476 585 aa6.77□□□□□ -1.33
VCAN-201ENST00000265077 FGD5Q6ZNL6 1462 aa6.77□□□□□ -1.33
VCAN-201ENST00000265077 GTF2E1P29083 439 aaPredicted RBP6.77□□□□□ -1.33
VCAN-201ENST00000265077 INCENPQ9NQS7 918 aa6.77□□□□□ -1.33
VCAN-201ENST00000265077 AKNAQ7Z591 1439 aa6.77□□□□□ -1.33
VCAN-201ENST00000265077 OLFM4Q6UX06 510 aa6.77□□□□□ -1.33
VCAN-201ENST00000265077 MARCH6O60337 910 aa6.77□□□□□ -1.33
VCAN-201ENST00000265077 G3BP1Q13283 466 aaKnown RBP eCLIP6.77□□□□□ -1.33
VCAN-201ENST00000265077 NF2P35240 595 aa6.77□□□□□ -1.33
VCAN-201ENST00000265077 CERS3Q8IU89 383 aa6.77□□□□□ -1.33
VCAN-201ENST00000265077 SYNJ1O43426 1573 aa6.77□□□□□ -1.33
VCAN-201ENST00000265077 NCOA2Q15596 1464 aa6.76□□□□□ -1.33
VCAN-201ENST00000265077 RSPH14Q9UHP6 348 aa6.76□□□□□ -1.33
VCAN-201ENST00000265077 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.76□□□□□ -1.33
VCAN-201ENST00000265077 HFM1A2PYH4 1435 aa6.76□□□□□ -1.33
VCAN-201ENST00000265077 DIAPH1O60610 1272 aaKnown RBP6.76□□□□□ -1.33
VCAN-201ENST00000265077 AK9Q5TCS8 1911 aa6.76□□□□□ -1.33
VCAN-201ENST00000265077 HIP1O00291 1037 aa6.76□□□□□ -1.33
VCAN-201ENST00000265077 JPH4Q96JJ6 628 aa6.76□□□□□ -1.33
VCAN-201ENST00000265077 SUDS3Q9H7L9 328 aaPredicted RBP6.76□□□□□ -1.33
VCAN-201ENST00000265077 DDX58O95786 925 aaKnown RBP6.76□□□□□ -1.33
VCAN-201ENST00000265077 NGDNQ8NEJ9 315 aaKnown RBP6.76□□□□□ -1.33
VCAN-201ENST00000265077 A0A1B0GUL7 405 aa6.76□□□□□ -1.33
VCAN-201ENST00000265077 GOLGA6L10A6NI86 522 aa6.76□□□□□ -1.33
VCAN-201ENST00000265077 VPS37CA5D8V6 355 aaPredicted RBP6.76□□□□□ -1.33
VCAN-201ENST00000265077 KIAA1328Q86T90 577 aa6.76□□□□□ -1.33
VCAN-201ENST00000265077 CNTROBQ8N137 903 aa6.76□□□□□ -1.33
VCAN-201ENST00000265077 GCC1Q96CN9 775 aa6.76□□□□□ -1.33
VCAN-201ENST00000265077 KIF2AO00139 706 aaPredicted RBP6.75□□□□□ -1.33
VCAN-201ENST00000265077 LNPKQ9C0E8 428 aa6.75□□□□□ -1.33
VCAN-201ENST00000265077 TMCO3Q6UWJ1 677 aa6.75□□□□□ -1.33
VCAN-201ENST00000265077 CUL7Q14999 1698 aa6.75□□□□□ -1.33
VCAN-201ENST00000265077 MYO6Q9UM54 1294 aa6.75□□□□□ -1.33
VCAN-201ENST00000265077 ZNF330Q9Y3S2 320 aaPredicted RBP6.75□□□□□ -1.33
VCAN-201ENST00000265077 TEFQ10587 303 aa6.75□□□□□ -1.33
VCAN-201ENST00000265077 KINO60870 393 aaKnown RBP6.75□□□□□ -1.33
VCAN-201ENST00000265077 PSMA5P28066 241 aa6.75□□□□□ -1.33
VCAN-201ENST00000265077 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.75□□□□□ -1.33
VCAN-201ENST00000265077 MLECQ14165 292 aa6.75□□□□□ -1.33
VCAN-201ENST00000265077 DHX16O60231 1041 aaKnown RBP6.74□□□□□ -1.33
VCAN-201ENST00000265077 WDR63Q8IWG1 891 aa6.74□□□□□ -1.33
VCAN-201ENST00000265077 PTPN23Q9H3S7 1636 aa6.74□□□□□ -1.33
VCAN-201ENST00000265077 BMS1Q14692 1282 aaKnown RBP6.74□□□□□ -1.33
VCAN-201ENST00000265077 PCMTD1Q96MG8 357 aaPredicted RBP6.74□□□□□ -1.33
VCAN-201ENST00000265077 AEBP2Q6ZN18 517 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms