RNA–Protein interactions for RNA: ENST00000264596.3

NEIL3-201, Transcript of nei like DNA glycosylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEIL3, Length 2,408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-201ENST00000264596 COL3A1P02461 1466 aaPredicted RBP25.24■■□□□ 1.63
NEIL3-201ENST00000264596 CD163L1Q9NR16 1453 aa25.23■■□□□ 1.63
NEIL3-201ENST00000264596 SMC4Q9NTJ3 1288 aa25.23■■□□□ 1.63
NEIL3-201ENST00000264596 TRIM35Q9UPQ4 493 aa25.23■■□□□ 1.63
NEIL3-201ENST00000264596 RWDD1Q9H446 243 aaPredicted RBP25.23■■□□□ 1.63
NEIL3-201ENST00000264596 DZIP1LQ8IYY4 767 aaKnown RBP25.22■■□□□ 1.63
NEIL3-201ENST00000264596 STAG3Q9UJ98 1225 aa25.21■■□□□ 1.63
NEIL3-201ENST00000264596 CDK19Q9BWU1 502 aa25.21■■□□□ 1.63
NEIL3-201ENST00000264596 HDGFL2Q7Z4V5 671 aaPredicted RBP25.2■■□□□ 1.62
NEIL3-201ENST00000264596 ANKRD26Q9UPS8 1709 aa25.2■■□□□ 1.62
NEIL3-201ENST00000264596 NLRP1Q9C000 1473 aa25.19■■□□□ 1.62
NEIL3-201ENST00000264596 CLTCQ00610 1675 aaKnown RBP25.19■■□□□ 1.62
NEIL3-201ENST00000264596 CABP1Q9NZU7 370 aa25.18■■□□□ 1.62
NEIL3-201ENST00000264596 DIAPH1O60610 1272 aaKnown RBP25.18■■□□□ 1.62
NEIL3-201ENST00000264596 CT47B1P0C2W7 299 aaPredicted RBP25.18■■□□□ 1.62
NEIL3-201ENST00000264596 RIPK4P57078 832 aa25.18■■□□□ 1.62
NEIL3-201ENST00000264596 SSH1Q8WYL5 1049 aa25.17■■□□□ 1.62
NEIL3-201ENST00000264596 ALKQ9UM73 1620 aa25.17■■□□□ 1.62
NEIL3-201ENST00000264596 MED14O60244 1454 aa25.16■■□□□ 1.62
NEIL3-201ENST00000264596 TRIM27P14373 513 aa25.16■■□□□ 1.62
NEIL3-201ENST00000264596 FRAT2O75474 233 aaPredicted RBP25.15■■□□□ 1.62
NEIL3-201ENST00000264596 GSE1Q14687 1217 aa25.15■■□□□ 1.62
NEIL3-201ENST00000264596 ITPRIPQ8IWB1 547 aa25.14■■□□□ 1.62
NEIL3-201ENST00000264596 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.14■■□□□ 1.61
NEIL3-201ENST00000264596 ARHGEF40Q8TER5 1519 aa25.12■■□□□ 1.61
NEIL3-201ENST00000264596 FBLN1P23142 703 aa25.12■■□□□ 1.61
NEIL3-201ENST00000264596 NOB1Q9ULX3 412 aaKnown RBP25.12■■□□□ 1.61
NEIL3-201ENST00000264596 KIF20BQ96Q89 1820 aa25.11■■□□□ 1.61
NEIL3-201ENST00000264596 ATF7IPQ6VMQ6 1270 aa25.11■■□□□ 1.61
NEIL3-201ENST00000264596 WAPLQ7Z5K2 1190 aa25.11■■□□□ 1.61
NEIL3-201ENST00000264596 UPF2Q9HAU5 1272 aaKnown RBP25.11■■□□□ 1.61
NEIL3-201ENST00000264596 IL16Q14005 1332 aa25.11■■□□□ 1.61
NEIL3-201ENST00000264596 BECN1Q14457 450 aa25.1■■□□□ 1.61
NEIL3-201ENST00000264596 CYB5RLQ6IPT4 315 aa25.1■■□□□ 1.61
NEIL3-201ENST00000264596 PNPLA6Q8IY17 1366 aa25.09■■□□□ 1.61
NEIL3-201ENST00000264596 PNNQ9H307 717 aaKnown RBP25.08■■□□□ 1.61
NEIL3-201ENST00000264596 DDX19BQ9UMR2 479 aa25.08■■□□□ 1.61
NEIL3-201ENST00000264596 ZMYM3Q14202 1370 aa25.08■■□□□ 1.61
NEIL3-201ENST00000264596 IL27Q8NEV9 243 aa25.08■■□□□ 1.61
NEIL3-201ENST00000264596 ANO8Q9HCE9 1232 aaPredicted RBP25.08■■□□□ 1.61
NEIL3-201ENST00000264596 TMEM57Q8N5G2 664 aa25.07■■□□□ 1.6
NEIL3-201ENST00000264596 PRKAR2BP31323 418 aa25.06■■□□□ 1.6
NEIL3-201ENST00000264596 LRRC7Q96NW7 1537 aa25.06■■□□□ 1.6
NEIL3-201ENST00000264596 TBC1D32Q96NH3 1257 aa25.06■■□□□ 1.6
NEIL3-201ENST00000264596 SLKQ9H2G2 1235 aaPredicted RBP25.05■■□□□ 1.6
NEIL3-201ENST00000264596 FAM69CQ0P6D2 419 aa25.05■■□□□ 1.6
NEIL3-201ENST00000264596 FCHSD2O94868 740 aa25.04■■□□□ 1.6
NEIL3-201ENST00000264596 POLKQ9UBT6 870 aa25.04■■□□□ 1.6
NEIL3-201ENST00000264596 HDAC1Q13547 482 aaPredicted RBP25.04■■□□□ 1.6
NEIL3-201ENST00000264596 RSPH6AQ9H0K4 717 aa25.03■■□□□ 1.6
NEIL3-201ENST00000264596 HMOX1P09601 288 aa25.02■■□□□ 1.6
NEIL3-201ENST00000264596 KIF16BQ96L93 1317 aa25.02■■□□□ 1.6
NEIL3-201ENST00000264596 MLECQ14165 292 aa25.02■■□□□ 1.6
NEIL3-201ENST00000264596 IPO8O15397 1037 aaKnown RBP25.01■■□□□ 1.59
NEIL3-201ENST00000264596 A2ML1A8K2U0 1454 aa25.01■■□□□ 1.59
NEIL3-201ENST00000264596 FAM135BQ49AJ0 1406 aa25■■□□□ 1.59
NEIL3-201ENST00000264596 RIMS2Q9UQ26 1411 aa25■■□□□ 1.59
NEIL3-201ENST00000264596 TSPOAP1O95153 1857 aa25■■□□□ 1.59
NEIL3-201ENST00000264596 CDC42BPGQ6DT37 1551 aa24.99■■□□□ 1.59
NEIL3-201ENST00000264596 ATP7BP35670 1465 aa24.99■■□□□ 1.59
NEIL3-201ENST00000264596 PHACTR3Q96KR7 559 aa24.99■■□□□ 1.59
NEIL3-201ENST00000264596 THUMPD2Q9BTF0 503 aaKnown RBP24.98■■□□□ 1.59
NEIL3-201ENST00000264596 ZBTB40Q9NUA8 1239 aa24.98■■□□□ 1.59
NEIL3-201ENST00000264596 EMILIN1Q9Y6C2 1016 aa24.98■■□□□ 1.59
NEIL3-201ENST00000264596 DLC1Q96QB1 1528 aa24.98■■□□□ 1.59
NEIL3-201ENST00000264596 TBC1D2Q9BYX2 928 aa24.97■■□□□ 1.59
NEIL3-201ENST00000264596 ALDH1L2Q3SY69 923 aa24.97■■□□□ 1.59
NEIL3-201ENST00000264596 MAP2P11137 1827 aaKnown RBP24.97■■□□□ 1.59
NEIL3-201ENST00000264596 MFAP1P55081 439 aaKnown RBP24.96■■□□□ 1.59
NEIL3-201ENST00000264596 RTN4Q9NQC3 1192 aaKnown RBP24.96■■□□□ 1.59
NEIL3-201ENST00000264596 NME9Q86XW9 330 aa24.96■■□□□ 1.59
NEIL3-201ENST00000264596 SMC5Q8IY18 1101 aa24.96■■□□□ 1.59
NEIL3-201ENST00000264596 ZRANB1Q9UGI0 708 aa24.95■■□□□ 1.59
NEIL3-201ENST00000264596 RIMBP3CA6NJZ7 1639 aa24.95■■□□□ 1.58
NEIL3-201ENST00000264596 RIMBP3BA6NNM3 1639 aa24.95■■□□□ 1.58
NEIL3-201ENST00000264596 RIMBP3Q9UFD9 1639 aa24.95■■□□□ 1.58
NEIL3-201ENST00000264596 NFE2L2Q16236 605 aa24.95■■□□□ 1.58
NEIL3-201ENST00000264596 SETD1AO15047 1707 aaKnown RBP24.94■■□□□ 1.58
NEIL3-201ENST00000264596 PPIP5K1Q6PFW1 1433 aa24.94■■□□□ 1.58
NEIL3-201ENST00000264596 BRPF3Q9ULD4 1205 aa24.94■■□□□ 1.58
NEIL3-201ENST00000264596 SPATA31D1Q6ZQQ2 1576 aa24.92■■□□□ 1.58
NEIL3-201ENST00000264596 WASLO00401 505 aaPredicted RBP24.92■■□□□ 1.58
NEIL3-201ENST00000264596 C22orf23Q9BZE7 217 aa24.92■■□□□ 1.58
NEIL3-201ENST00000264596 ANTXR1Q9H6X2 564 aa24.92■■□□□ 1.58
NEIL3-201ENST00000264596 SPRYD3Q8NCJ5 442 aa24.92■■□□□ 1.58
NEIL3-201ENST00000264596 DIP2BQ9P265 1576 aa24.91■■□□□ 1.58
NEIL3-201ENST00000264596 TXNDC2Q86VQ3 553 aa24.91■■□□□ 1.58
NEIL3-201ENST00000264596 PPP6R1Q9UPN7 881 aa24.91■■□□□ 1.58
NEIL3-201ENST00000264596 NCKAP5LQ9HCH0 1330 aa24.91■■□□□ 1.58
NEIL3-201ENST00000264596 AGLP35573 1532 aa24.91■■□□□ 1.58
NEIL3-201ENST00000264596 ELL2O00472 640 aaPredicted RBP24.9■■□□□ 1.58
NEIL3-201ENST00000264596 IL13P35225 146 aa24.9■■□□□ 1.58
NEIL3-201ENST00000264596 TSPYL6Q8N831 410 aa24.9■■□□□ 1.58
NEIL3-201ENST00000264596 LNPKQ9C0E8 428 aa24.9■■□□□ 1.58
NEIL3-201ENST00000264596 EDC4Q6P2E9 1401 aaKnown RBP24.9■■□□□ 1.58
NEIL3-201ENST00000264596 METP08581 1390 aa24.89■■□□□ 1.58
NEIL3-201ENST00000264596 CPSF1Q10570 1443 aaKnown RBP24.89■■□□□ 1.58
NEIL3-201ENST00000264596 REREQ9P2R6 1566 aa24.89■■□□□ 1.57
NEIL3-201ENST00000264596 VAMP4O75379 141 aa24.88■■□□□ 1.57
NEIL3-201ENST00000264596 NUCB1Q02818 461 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms