RNA–Protein interactions for RNA: ENST00000264107.11

ITGA6-201, Transcript of integrin subunit alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA6, Length 5,618 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-201ENST00000264107 ZNF526Q8TF50 670 aaPredicted RBP21.4■■□□□ 1.02
ITGA6-201ENST00000264107 USP25Q9UHP3 1055 aa21.4■■□□□ 1.02
ITGA6-201ENST00000264107 CTR9Q6PD62 1173 aa21.39■■□□□ 1.01
ITGA6-201ENST00000264107 KANK1Q14678 1352 aa21.39■■□□□ 1.01
ITGA6-201ENST00000264107 ANKRD30AQ9BXX3 1397 aa21.39■■□□□ 1.01
ITGA6-201ENST00000264107 MARCH6O60337 910 aa21.39■■□□□ 1.01
ITGA6-201ENST00000264107 ADAMTS8Q9UP79 889 aa21.39■■□□□ 1.01
ITGA6-201ENST00000264107 NUP62CLQ9H1M0 184 aa21.38■■□□□ 1.01
ITGA6-201ENST00000264107 TDO2P48775 406 aa21.38■■□□□ 1.01
ITGA6-201ENST00000264107 FILIP1LQ4L180 1135 aa21.38■■□□□ 1.01
ITGA6-201ENST00000264107 CRACR2AQ9BSW2 395 aa21.38■■□□□ 1.01
ITGA6-201ENST00000264107 CARMIL2Q6F5E8 1435 aa21.38■■□□□ 1.01
ITGA6-201ENST00000264107 STK26Q9P289 416 aa21.38■■□□□ 1.01
ITGA6-201ENST00000264107 LMOD2Q6P5Q4 547 aa21.37■■□□□ 1.01
ITGA6-201ENST00000264107 RUNDC1Q96C34 613 aa21.37■■□□□ 1.01
ITGA6-201ENST00000264107 CADPSQ9ULU8 1353 aa21.37■■□□□ 1.01
ITGA6-201ENST00000264107 ODF2Q5BJF6 829 aa21.37■■□□□ 1.01
ITGA6-201ENST00000264107 BCAR3O75815 825 aa21.36■■□□□ 1.01
ITGA6-201ENST00000264107 KRT85P78386 507 aa21.36■■□□□ 1.01
ITGA6-201ENST00000264107 URI1O94763 535 aaPredicted RBP21.36■■□□□ 1.01
ITGA6-201ENST00000264107 NF2P35240 595 aa21.35■■□□□ 1.01
ITGA6-201ENST00000264107 CCDC184Q52MB2 194 aa21.35■■□□□ 1.01
ITGA6-201ENST00000264107 PRM3Q9NNZ6 103 aa21.35■■□□□ 1.01
ITGA6-201ENST00000264107 CCDC9Q9Y3X0 531 aaKnown RBP21.35■■□□□ 1.01
ITGA6-201ENST00000264107 IFIT2P09913 472 aaKnown RBP21.35■■□□□ 1.01
ITGA6-201ENST00000264107 NEFHP12036 1026 aa21.35■■□□□ 1.01
ITGA6-201ENST00000264107 BRPF1P55201 1214 aaPredicted RBP21.35■■□□□ 1.01
ITGA6-201ENST00000264107 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.35■■□□□ 1.01
ITGA6-201ENST00000264107 CEBPZQ03701 1054 aaKnown RBP21.35■■□□□ 1.01
ITGA6-201ENST00000264107 SSFA2P28290 1259 aa21.34■■□□□ 1.01
ITGA6-201ENST00000264107 CCDC18Q5T9S5 1454 aa21.34■■□□□ 1.01
ITGA6-201ENST00000264107 RNF187Q5TA31 235 aaPredicted RBP21.34■■□□□ 1.01
ITGA6-201ENST00000264107 PPFIBP1Q86W92 1011 aa21.34■■□□□ 1.01
ITGA6-201ENST00000264107 TERF2IPQ9NYB0 399 aa21.34■■□□□ 1.01
ITGA6-201ENST00000264107 CBFA2T2O43439 604 aa21.34■■□□□ 1.01
ITGA6-201ENST00000264107 PSMA5P28066 241 aa21.33■■□□□ 1.01
ITGA6-201ENST00000264107 MICALCLQ6ZW33 695 aa21.33■■□□□ 1.01
ITGA6-201ENST00000264107 NEXNQ0ZGT2 675 aa21.33■■□□□ 1
ITGA6-201ENST00000264107 MAP3K11Q16584 847 aa21.33■■□□□ 1
ITGA6-201ENST00000264107 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.33■■□□□ 1
ITGA6-201ENST00000264107 RAPGEF2Q9Y4G8 1499 aa21.33■■□□□ 1
ITGA6-201ENST00000264107 CCDC181Q5TID7 509 aa21.32■■□□□ 1
ITGA6-201ENST00000264107 MEX3CQ5U5Q3 659 aaKnown RBP21.32■■□□□ 1
ITGA6-201ENST00000264107 JAKMIP3Q5VZ66 844 aa21.32■■□□□ 1
ITGA6-201ENST00000264107 NOLC1Q14978 699 aaKnown RBP eCLIP21.32■■□□□ 1
ITGA6-201ENST00000264107 RASSF4Q9H2L5 321 aa21.32■■□□□ 1
ITGA6-201ENST00000264107 CEP57L1Q8IYX8 460 aa21.32■■□□□ 1
ITGA6-201ENST00000264107 ADCY5O95622 1261 aa21.32■■□□□ 1
ITGA6-201ENST00000264107 CCDC183Q5T5S1 534 aa21.32■■□□□ 1
ITGA6-201ENST00000264107 GCC1Q96CN9 775 aa21.32■■□□□ 1
ITGA6-201ENST00000264107 ZKSCAN5Q9Y2L8 839 aa21.32■■□□□ 1
ITGA6-201ENST00000264107 PAXBP1Q9Y5B6 917 aa21.32■■□□□ 1
ITGA6-201ENST00000264107 TTC31Q49AM3 519 aaPredicted RBP21.32■■□□□ 1
ITGA6-201ENST00000264107 ATAD2BQ9ULI0 1458 aa21.31■■□□□ 1
ITGA6-201ENST00000264107 IVLP07476 585 aa21.31■■□□□ 1
ITGA6-201ENST00000264107 PNISRQ8TF01 805 aaKnown RBP21.31■■□□□ 1
ITGA6-201ENST00000264107 RBM33Q96EV2 1170 aaKnown RBP21.31■■□□□ 1
ITGA6-201ENST00000264107 ZNF396Q96N95 335 aaPredicted RBP21.31■■□□□ 1
ITGA6-201ENST00000264107 ERLIN2O94905 339 aa21.3■■□□□ 1
ITGA6-201ENST00000264107 RIPK4P57078 832 aa21.3■■□□□ 1
ITGA6-201ENST00000264107 IQCEQ6IPM2 695 aa21.3■■□□□ 1
ITGA6-201ENST00000264107 TRMT1Q9NXH9 659 aaKnown RBP21.3■■□□□ 1
ITGA6-201ENST00000264107 SFPQP23246 707 aaKnown RBP eCLIP21.3■■□□□ 1
ITGA6-201ENST00000264107 UPF3BQ9BZI7 483 aaKnown RBP21.29■■□□□ 1
ITGA6-201ENST00000264107 C10orf67Q8IYJ2 551 aa21.29■■□□□ 1
ITGA6-201ENST00000264107 CLIP2Q9UDT6 1046 aa21.29■■□□□ 1
ITGA6-201ENST00000264107 FHOD3Q2V2M9 1422 aa21.29■■□□□ 1
ITGA6-201ENST00000264107 ERC2O15083 957 aa21.29■■□□□ 1
ITGA6-201ENST00000264107 SAFBQ15424 915 aaKnown RBP eCLIP21.29■■□□□ 1
ITGA6-201ENST00000264107 SMARCC1Q92922 1105 aaPredicted RBP21.29■■□□□ 1
ITGA6-201ENST00000264107 LRRFIP2Q9Y608 721 aaKnown RBP21.29■■□□□ 1
ITGA6-201ENST00000264107 KLHL40Q2TBA0 621 aa21.28■■□□□ 1
ITGA6-201ENST00000264107 OGFRQ9NZT2 677 aa21.28■■□□□ 1
ITGA6-201ENST00000264107 MAP9Q49MG5 647 aa21.28■■□□□ 1
ITGA6-201ENST00000264107 CCDC91Q7Z6B0 441 aa21.28■■□□□ 1
ITGA6-201ENST00000264107 TAX1BP1Q86VP1 789 aa21.28■■□□□ 1
ITGA6-201ENST00000264107 CEP135Q66GS9 1140 aa21.27■■□□□ 1
ITGA6-201ENST00000264107 NINLQ9Y2I6 1382 aa21.27■■□□□ 1
ITGA6-201ENST00000264107 CASQ1P31415 396 aa21.27■■□□□ 1
ITGA6-201ENST00000264107 GBP2P32456 591 aaPredicted RBP21.27■■□□□ 1
ITGA6-201ENST00000264107 STK38Q15208 465 aa21.27■■□□□ 1
ITGA6-201ENST00000264107 RSPH14Q9UHP6 348 aa21.27■■□□□ 1
ITGA6-201ENST00000264107 HSP90AB2PQ58FF8 381 aa21.27■■□□□ 1
ITGA6-201ENST00000264107 SPATA32Q96LK8 384 aa21.27■■□□□ 1
ITGA6-201ENST00000264107 ZSCAN12O43309 604 aa21.27■□□□□ 0.99
ITGA6-201ENST00000264107 FBXO3Q9UK99 471 aa21.27■□□□□ 0.99
ITGA6-201ENST00000264107 FEZ1Q99689 392 aa21.26■□□□□ 0.99
ITGA6-201ENST00000264107 GGT6Q6P531 493 aa21.26■□□□□ 0.99
ITGA6-201ENST00000264107 CAMK4Q16566 473 aa21.26■□□□□ 0.99
ITGA6-201ENST00000264107 ENOX2Q16206 610 aaKnown RBP21.26■□□□□ 0.99
ITGA6-201ENST00000264107 ZSCAN23Q3MJ62 389 aa21.25■□□□□ 0.99
ITGA6-201ENST00000264107 ZNF830Q96NB3 372 aaPredicted RBP21.25■□□□□ 0.99
ITGA6-201ENST00000264107 ZNHIT6Q9NWK9 470 aaKnown RBP21.25■□□□□ 0.99
ITGA6-201ENST00000264107 WWC1Q8IX03 1113 aa21.25■□□□□ 0.99
ITGA6-201ENST00000264107 ME1P48163 572 aa21.24■□□□□ 0.99
ITGA6-201ENST00000264107 ARHGAP29Q52LW3 1261 aa21.24■□□□□ 0.99
ITGA6-201ENST00000264107 NEMFO60524 1076 aa21.24■□□□□ 0.99
ITGA6-201ENST00000264107 LARP1BQ659C4 914 aaKnown RBP21.24■□□□□ 0.99
ITGA6-201ENST00000264107 TRDNQ13061 729 aa21.24■□□□□ 0.99
ITGA6-201ENST00000264107 SSR1P43307 286 aaKnown RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms