RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 SPATA31D1Q6ZQQ2 1576 aa29.04■■■□□ 2.24
MCF2L-201ENST00000261963 COG6Q9Y2V7 657 aa29.04■■■□□ 2.24
MCF2L-201ENST00000261963 CANXP27824 592 aaKnown RBP29.04■■■□□ 2.24
MCF2L-201ENST00000261963 IGHDP01880 384 aa29.03■■■□□ 2.24
MCF2L-201ENST00000261963 PLEKHF1Q96S99 279 aa29.03■■■□□ 2.24
MCF2L-201ENST00000261963 ANKRD26Q9UPS8 1709 aa29.03■■■□□ 2.24
MCF2L-201ENST00000261963 C8orf34Q49A92 452 aa29.01■■■□□ 2.23
MCF2L-201ENST00000261963 CLUAP1Q96AJ1 413 aa29.01■■■□□ 2.23
MCF2L-201ENST00000261963 CABP1Q9NZU7 370 aa29.01■■■□□ 2.23
MCF2L-201ENST00000261963 RIMS2Q9UQ26 1411 aa29■■■□□ 2.23
MCF2L-201ENST00000261963 SLC4A3P48751 1232 aa29■■■□□ 2.23
MCF2L-201ENST00000261963 FAM161AQ3B820 660 aa29■■■□□ 2.23
MCF2L-201ENST00000261963 HDGFL2Q7Z4V5 671 aaPredicted RBP29■■■□□ 2.23
MCF2L-201ENST00000261963 MYH16Q9H6N6 1097 aa29■■■□□ 2.23
MCF2L-201ENST00000261963 DLC1Q96QB1 1528 aa28.99■■■□□ 2.23
MCF2L-201ENST00000261963 U2SURPO15042 1029 aaKnown RBP28.99■■■□□ 2.23
MCF2L-201ENST00000261963 RGS3P49796 1198 aa28.99■■■□□ 2.23
MCF2L-201ENST00000261963 WAPLQ7Z5K2 1190 aa28.97■■■□□ 2.23
MCF2L-201ENST00000261963 TNNQ9UQP3 1299 aa28.97■■■□□ 2.23
MCF2L-201ENST00000261963 SETD1AO15047 1707 aaKnown RBP28.97■■■□□ 2.23
MCF2L-201ENST00000261963 RLBP1P12271 317 aa28.96■■■□□ 2.23
MCF2L-201ENST00000261963 MLECQ14165 292 aa28.96■■■□□ 2.23
MCF2L-201ENST00000261963 BCL2L13Q9BXK5 485 aa28.96■■■□□ 2.23
MCF2L-201ENST00000261963 RSPH6AQ9H0K4 717 aa28.96■■■□□ 2.23
MCF2L-201ENST00000261963 PNPLA6Q8IY17 1366 aa28.95■■■□□ 2.23
MCF2L-201ENST00000261963 TMPOP42166 694 aaKnown RBP28.95■■■□□ 2.22
MCF2L-201ENST00000261963 TRIM35Q9UPQ4 493 aa28.94■■■□□ 2.22
MCF2L-201ENST00000261963 FAM43AQ8N2R8 423 aa28.93■■■□□ 2.22
MCF2L-201ENST00000261963 TSR2Q969E8 191 aaKnown RBP28.91■■■□□ 2.22
MCF2L-201ENST00000261963 KIF20BQ96Q89 1820 aa28.9■■■□□ 2.22
MCF2L-201ENST00000261963 ATP7BP35670 1465 aa28.89■■■□□ 2.22
MCF2L-201ENST00000261963 DIAPH1O60610 1272 aaKnown RBP28.89■■■□□ 2.22
MCF2L-201ENST00000261963 AAMPQ13685 434 aa28.89■■■□□ 2.21
MCF2L-201ENST00000261963 MAPK8IP3Q9UPT6 1336 aa28.88■■■□□ 2.21
MCF2L-201ENST00000261963 NRXN3Q9Y4C0 1643 aa28.88■■■□□ 2.21
MCF2L-201ENST00000261963 PCDHB15Q9Y5E8 787 aa28.86■■■□□ 2.21
MCF2L-201ENST00000261963 CT47B1P0C2W7 299 aaPredicted RBP28.86■■■□□ 2.21
MCF2L-201ENST00000261963 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.86■■■□□ 2.21
MCF2L-201ENST00000261963 FRAT2O75474 233 aaPredicted RBP28.85■■■□□ 2.21
MCF2L-201ENST00000261963 METP08581 1390 aa28.85■■■□□ 2.21
MCF2L-201ENST00000261963 EXOSC9Q06265 439 aaKnown RBP28.84■■■□□ 2.21
MCF2L-201ENST00000261963 FBLN1P23142 703 aa28.83■■■□□ 2.21
MCF2L-201ENST00000261963 IL16Q14005 1332 aa28.83■■■□□ 2.21
MCF2L-201ENST00000261963 POLKQ9UBT6 870 aa28.83■■■□□ 2.21
MCF2L-201ENST00000261963 ZMYM3Q14202 1370 aa28.83■■■□□ 2.21
MCF2L-201ENST00000261963 CDC42BPGQ6DT37 1551 aa28.83■■■□□ 2.21
MCF2L-201ENST00000261963 RIPK4P57078 832 aa28.82■■■□□ 2.2
MCF2L-201ENST00000261963 PMFBP1Q8TBY8 1022 aa28.82■■■□□ 2.2
MCF2L-201ENST00000261963 ZKSCAN2Q63HK3 967 aa28.81■■■□□ 2.2
MCF2L-201ENST00000261963 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.81■■■□□ 2.2
MCF2L-201ENST00000261963 CPSF1Q10570 1443 aaKnown RBP28.8■■■□□ 2.2
MCF2L-201ENST00000261963 WASLO00401 505 aaPredicted RBP28.8■■■□□ 2.2
MCF2L-201ENST00000261963 MVPQ14764 893 aaKnown RBP28.79■■■□□ 2.2
MCF2L-201ENST00000261963 FCHSD2O94868 740 aa28.78■■■□□ 2.2
MCF2L-201ENST00000261963 LRRC7Q96NW7 1537 aa28.78■■■□□ 2.2
MCF2L-201ENST00000261963 PNNQ9H307 717 aaKnown RBP28.78■■■□□ 2.2
MCF2L-201ENST00000261963 PPIP5K1Q6PFW1 1433 aa28.77■■■□□ 2.2
MCF2L-201ENST00000261963 TXNDC2Q86VQ3 553 aa28.77■■■□□ 2.2
MCF2L-201ENST00000261963 SSH1Q8WYL5 1049 aa28.77■■■□□ 2.2
MCF2L-201ENST00000261963 SMC4Q9NTJ3 1288 aa28.77■■■□□ 2.2
MCF2L-201ENST00000261963 DZIP1LQ8IYY4 767 aaKnown RBP28.77■■■□□ 2.2
MCF2L-201ENST00000261963 EDC4Q6P2E9 1401 aaKnown RBP28.76■■■□□ 2.19
MCF2L-201ENST00000261963 FAM135BQ49AJ0 1406 aa28.75■■■□□ 2.19
MCF2L-201ENST00000261963 KIF13AQ9H1H9 1805 aa28.75■■■□□ 2.19
MCF2L-201ENST00000261963 TECPR2O15040 1411 aa28.73■■■□□ 2.19
MCF2L-201ENST00000261963 ESF1Q9H501 851 aaKnown RBP28.73■■■□□ 2.19
MCF2L-201ENST00000261963 TRIM27P14373 513 aa28.73■■■□□ 2.19
MCF2L-201ENST00000261963 PRKAR2BP31323 418 aa28.73■■■□□ 2.19
MCF2L-201ENST00000261963 FTSJ3Q8IY81 847 aaKnown RBP28.73■■■□□ 2.19
MCF2L-201ENST00000261963 NME9Q86XW9 330 aa28.72■■■□□ 2.19
MCF2L-201ENST00000261963 NUDT16Q96DE0 195 aaKnown RBP28.71■■■□□ 2.19
MCF2L-201ENST00000261963 EMILIN1Q9Y6C2 1016 aa28.71■■■□□ 2.19
MCF2L-201ENST00000261963 VIRMAQ69YN4 1812 aaKnown RBP28.71■■■□□ 2.19
MCF2L-201ENST00000261963 SIRT1Q96EB6 747 aa28.71■■■□□ 2.19
MCF2L-201ENST00000261963 ZRANB1Q9UGI0 708 aa28.71■■■□□ 2.19
MCF2L-201ENST00000261963 USP19O94966 1318 aa28.71■■■□□ 2.19
MCF2L-201ENST00000261963 NCKAP5LQ9HCH0 1330 aa28.71■■■□□ 2.19
MCF2L-201ENST00000261963 RWDD1Q9H446 243 aaPredicted RBP28.7■■■□□ 2.19
MCF2L-201ENST00000261963 PDZRN3Q9UPQ7 1066 aa28.7■■■□□ 2.19
MCF2L-201ENST00000261963 TNRQ92752 1358 aa28.7■■■□□ 2.19
MCF2L-201ENST00000261963 KNDC1Q76NI1 1749 aa28.7■■■□□ 2.18
MCF2L-201ENST00000261963 MAP2P11137 1827 aaKnown RBP28.69■■■□□ 2.18
MCF2L-201ENST00000261963 ATF7IPQ6VMQ6 1270 aa28.68■■■□□ 2.18
MCF2L-201ENST00000261963 PHACTR3Q96KR7 559 aa28.68■■■□□ 2.18
MCF2L-201ENST00000261963 NOB1Q9ULX3 412 aaKnown RBP28.68■■■□□ 2.18
MCF2L-201ENST00000261963 CPS1P31327 1500 aa28.67■■■□□ 2.18
MCF2L-201ENST00000261963 IL13P35225 146 aa28.67■■■□□ 2.18
MCF2L-201ENST00000261963 CCDC61Q9Y6R9 512 aa28.67■■■□□ 2.18
MCF2L-201ENST00000261963 AATKQ6ZMQ8 1374 aa28.66■■■□□ 2.18
MCF2L-201ENST00000261963 SEC24BO95487 1268 aa28.66■■■□□ 2.18
MCF2L-201ENST00000261963 HMOX1P09601 288 aa28.66■■■□□ 2.18
MCF2L-201ENST00000261963 TMEM2Q9UHN6 1383 aa28.66■■■□□ 2.18
MCF2L-201ENST00000261963 HDGFP51858 240 aaKnown RBP28.65■■■□□ 2.18
MCF2L-201ENST00000261963 CDK12Q9NYV4 1490 aaPredicted RBP28.65■■■□□ 2.18
MCF2L-201ENST00000261963 NFE2L2Q16236 605 aa28.64■■■□□ 2.18
MCF2L-201ENST00000261963 PRR36Q9H6K5 1346 aa28.63■■■□□ 2.17
MCF2L-201ENST00000261963 MON2Q7Z3U7 1717 aa28.63■■■□□ 2.17
MCF2L-201ENST00000261963 DDX19BQ9UMR2 479 aa28.62■■■□□ 2.17
MCF2L-201ENST00000261963 ITPRIPQ8IWB1 547 aa28.62■■■□□ 2.17
MCF2L-201ENST00000261963 ROBO2Q9HCK4 1378 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms