RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 H3BQV1 296 aa19.61■□□□□ 0.73
SREBF1-201ENST00000261646 IFFO2Q5TF58 517 aa19.61■□□□□ 0.73
SREBF1-201ENST00000261646 BAG4O95429 457 aaKnown RBP19.61■□□□□ 0.73
SREBF1-201ENST00000261646 CBX1P83916 185 aa19.61■□□□□ 0.73
SREBF1-201ENST00000261646 A0A0G2JS52 829 aa19.61■□□□□ 0.73
SREBF1-201ENST00000261646 GNL2Q13823 731 aaKnown RBP19.6■□□□□ 0.73
SREBF1-201ENST00000261646 TESK2Q96S53 571 aa19.6■□□□□ 0.73
SREBF1-201ENST00000261646 TNNQ9UQP3 1299 aa19.6■□□□□ 0.73
SREBF1-201ENST00000261646 TRIM27P14373 513 aa19.6■□□□□ 0.73
SREBF1-201ENST00000261646 KIF3AQ9Y496 699 aa19.6■□□□□ 0.73
SREBF1-201ENST00000261646 SF3A1Q15459 793 aaKnown RBP19.59■□□□□ 0.73
SREBF1-201ENST00000261646 TWISTNBQ3B726 338 aaPredicted RBP19.59■□□□□ 0.73
SREBF1-201ENST00000261646 PRAM1Q96QH2 718 aa19.59■□□□□ 0.73
SREBF1-201ENST00000261646 TCOF1Q13428 1488 aaKnown RBP19.59■□□□□ 0.73
SREBF1-201ENST00000261646 MCM2P49736 904 aa19.59■□□□□ 0.73
SREBF1-201ENST00000261646 SASS6Q6UVJ0 657 aa19.59■□□□□ 0.73
SREBF1-201ENST00000261646 TRIM5Q9C035 493 aa19.59■□□□□ 0.73
SREBF1-201ENST00000261646 CTTNBP2Q8WZ74 1663 aa19.59■□□□□ 0.73
SREBF1-201ENST00000261646 KLHL40Q2TBA0 621 aa19.58■□□□□ 0.73
SREBF1-201ENST00000261646 CCAR2Q8N163 923 aaKnown RBP19.58■□□□□ 0.73
SREBF1-201ENST00000261646 PER1O15534 1290 aaPredicted RBP19.58■□□□□ 0.73
SREBF1-201ENST00000261646 ZKSCAN1P17029 563 aaPredicted RBP19.58■□□□□ 0.73
SREBF1-201ENST00000261646 ATP10BO94823 1461 aa19.58■□□□□ 0.72
SREBF1-201ENST00000261646 ERC2O15083 957 aa19.58■□□□□ 0.72
SREBF1-201ENST00000261646 SPINK5Q9NQ38 1064 aaPredicted RBP19.58■□□□□ 0.72
SREBF1-201ENST00000261646 FKBP5Q13451 457 aaPredicted RBP19.57■□□□□ 0.72
SREBF1-201ENST00000261646 FAM184AQ8NB25 1140 aa19.57■□□□□ 0.72
SREBF1-201ENST00000261646 PZPP20742 1482 aa19.57■□□□□ 0.72
SREBF1-201ENST00000261646 TMPOP42166 694 aaKnown RBP19.56■□□□□ 0.72
SREBF1-201ENST00000261646 NPHP1O15259 732 aa19.56■□□□□ 0.72
SREBF1-201ENST00000261646 TPD52L1Q16890 204 aaPredicted RBP19.56■□□□□ 0.72
SREBF1-201ENST00000261646 FBXW7Q969H0 707 aa19.56■□□□□ 0.72
SREBF1-201ENST00000261646 COG3Q96JB2 828 aa19.56■□□□□ 0.72
SREBF1-201ENST00000261646 RLBP1P12271 317 aa19.56■□□□□ 0.72
SREBF1-201ENST00000261646 HOMER1Q86YM7 354 aa19.56■□□□□ 0.72
SREBF1-201ENST00000261646 THUMPD2Q9BTF0 503 aaKnown RBP19.56■□□□□ 0.72
SREBF1-201ENST00000261646 RBM27Q9P2N5 1060 aaKnown RBP19.56■□□□□ 0.72
SREBF1-201ENST00000261646 KDM6BO15054 1643 aa19.55■□□□□ 0.72
SREBF1-201ENST00000261646 NGDNQ8NEJ9 315 aaKnown RBP19.55■□□□□ 0.72
SREBF1-201ENST00000261646 CABP1Q9NZU7 370 aa19.55■□□□□ 0.72
SREBF1-201ENST00000261646 TPM3P06753 285 aa19.54■□□□□ 0.72
SREBF1-201ENST00000261646 PDCL2Q8N4E4 241 aa19.54■□□□□ 0.72
SREBF1-201ENST00000261646 RUFY2Q8WXA3 655 aa19.54■□□□□ 0.72
SREBF1-201ENST00000261646 RBM42Q9BTD8 480 aaKnown RBP19.54■□□□□ 0.72
SREBF1-201ENST00000261646 LETM1O95202 739 aaPredicted RBP19.54■□□□□ 0.72
SREBF1-201ENST00000261646 TBC1D9Q6ZT07 1266 aa19.54■□□□□ 0.72
SREBF1-201ENST00000261646 FBLN1P23142 703 aa19.53■□□□□ 0.72
SREBF1-201ENST00000261646 NSD3Q9BZ95 1437 aa19.53■□□□□ 0.72
SREBF1-201ENST00000261646 AMPHP49418 695 aa19.53■□□□□ 0.72
SREBF1-201ENST00000261646 TEX14Q8IWB6 1497 aa19.53■□□□□ 0.72
SREBF1-201ENST00000261646 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.53■□□□□ 0.72
SREBF1-201ENST00000261646 HDGFP51858 240 aaKnown RBP19.52■□□□□ 0.72
SREBF1-201ENST00000261646 WDR33Q9C0J8 1336 aaKnown RBP19.52■□□□□ 0.72
SREBF1-201ENST00000261646 WDR62O43379 1518 aa19.51■□□□□ 0.71
SREBF1-201ENST00000261646 BMP2KLQ5H9B9 411 aa19.51■□□□□ 0.71
SREBF1-201ENST00000261646 OSCARQ8IYS5 282 aa19.51■□□□□ 0.71
SREBF1-201ENST00000261646 USP25Q9UHP3 1055 aa19.51■□□□□ 0.71
SREBF1-201ENST00000261646 ZSCAN23Q3MJ62 389 aa19.51■□□□□ 0.71
SREBF1-201ENST00000261646 UPF3BQ9BZI7 483 aaKnown RBP19.5■□□□□ 0.71
SREBF1-201ENST00000261646 RALGAPBQ86X10 1494 aa19.5■□□□□ 0.71
SREBF1-201ENST00000261646 DYNC1I1O14576 645 aa19.5■□□□□ 0.71
SREBF1-201ENST00000261646 OFD1O75665 1012 aa19.5■□□□□ 0.71
SREBF1-201ENST00000261646 GDPD2Q9HCC8 539 aa19.5■□□□□ 0.71
SREBF1-201ENST00000261646 RAPGEF6Q8TEU7 1601 aa19.49■□□□□ 0.71
SREBF1-201ENST00000261646 TEX35Q5T0J7 233 aa19.49■□□□□ 0.71
SREBF1-201ENST00000261646 CCDC66A2RUB6 948 aa19.49■□□□□ 0.71
SREBF1-201ENST00000261646 KIF14Q15058 1648 aa19.49■□□□□ 0.71
SREBF1-201ENST00000261646 CCDC112Q8NEF3 446 aa19.49■□□□□ 0.71
SREBF1-201ENST00000261646 GOLGA6L1Q8N7Z2 621 aa19.48■□□□□ 0.71
SREBF1-201ENST00000261646 PRAG1Q86YV5 1406 aa19.48■□□□□ 0.71
SREBF1-201ENST00000261646 EIF2S2P20042 333 aaKnown RBP19.48■□□□□ 0.71
SREBF1-201ENST00000261646 CCDC192P0DO97 292 aa19.47■□□□□ 0.71
SREBF1-201ENST00000261646 FOSBP53539 338 aa19.47■□□□□ 0.71
SREBF1-201ENST00000261646 NUTM2GQ5VZR2 741 aa19.47■□□□□ 0.71
SREBF1-201ENST00000261646 GPRASP1Q5JY77 1395 aa19.47■□□□□ 0.71
SREBF1-201ENST00000261646 TSPYL4Q9UJ04 414 aa19.47■□□□□ 0.71
SREBF1-201ENST00000261646 CCDC9Q9Y3X0 531 aaKnown RBP19.47■□□□□ 0.71
SREBF1-201ENST00000261646 HDAC5Q9UQL6 1122 aa19.47■□□□□ 0.71
SREBF1-201ENST00000261646 SPATA31E1Q6ZUB1 1445 aa19.46■□□□□ 0.71
SREBF1-201ENST00000261646 MCM5P33992 734 aa19.46■□□□□ 0.71
SREBF1-201ENST00000261646 RAB3GAP1Q15042 981 aa19.46■□□□□ 0.71
SREBF1-201ENST00000261646 GAS2L2Q8NHY3 880 aa19.46■□□□□ 0.71
SREBF1-201ENST00000261646 SMARCA5O60264 1052 aaPredicted RBP19.46■□□□□ 0.71
SREBF1-201ENST00000261646 PRIM1P49642 420 aaKnown RBP19.46■□□□□ 0.71
SREBF1-201ENST00000261646 TXNDC2Q86VQ3 553 aa19.46■□□□□ 0.71
SREBF1-201ENST00000261646 MAPK8IP2Q13387 824 aaPredicted RBP19.45■□□□□ 0.7
SREBF1-201ENST00000261646 HDAC1Q13547 482 aaPredicted RBP19.45■□□□□ 0.7
SREBF1-201ENST00000261646 MNS1Q8NEH6 495 aa19.45■□□□□ 0.7
SREBF1-201ENST00000261646 SNX21Q969T3 373 aa19.45■□□□□ 0.7
SREBF1-201ENST00000261646 CDK19Q9BWU1 502 aa19.45■□□□□ 0.7
SREBF1-201ENST00000261646 IFIT2P09913 472 aaKnown RBP19.45■□□□□ 0.7
SREBF1-201ENST00000261646 ZKSCAN5Q9Y2L8 839 aa19.45■□□□□ 0.7
SREBF1-201ENST00000261646 DISP1Q96F81 1524 aa19.45■□□□□ 0.7
SREBF1-201ENST00000261646 SURF6O75683 361 aaKnown RBP19.45■□□□□ 0.7
SREBF1-201ENST00000261646 SMC5Q8IY18 1101 aa19.44■□□□□ 0.7
SREBF1-201ENST00000261646 SPDYE4A6NLX3 237 aa19.44■□□□□ 0.7
SREBF1-201ENST00000261646 FAM69CQ0P6D2 419 aa19.44■□□□□ 0.7
SREBF1-201ENST00000261646 ZNF830Q96NB3 372 aaPredicted RBP19.44■□□□□ 0.7
SREBF1-201ENST00000261646 CHMP4AQ9BY43 222 aa19.44■□□□□ 0.7
SREBF1-201ENST00000261646 DMRT2Q9Y5R5 561 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms