RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 AK7Q96M32 723 aa17.27■□□□□ 0.36
ZC3H4-201ENST00000253048 NACAP1Q9BZK3 213 aa17.27■□□□□ 0.36
ZC3H4-201ENST00000253048 PLEKHH2Q8IVE3 1493 aa17.27■□□□□ 0.36
ZC3H4-201ENST00000253048 ZNF644Q9H582 1327 aaPredicted RBP17.27■□□□□ 0.35
ZC3H4-201ENST00000253048 DZIP1LQ8IYY4 767 aaKnown RBP17.27■□□□□ 0.35
ZC3H4-201ENST00000253048 RBM19Q9Y4C8 960 aaKnown RBP17.27■□□□□ 0.35
ZC3H4-201ENST00000253048 RPGRQ92834 1020 aaKnown RBP17.26■□□□□ 0.35
ZC3H4-201ENST00000253048 PPM1FP49593 454 aaPredicted RBP17.26■□□□□ 0.35
ZC3H4-201ENST00000253048 LRPPRCP42704 1394 aaKnown RBP17.26■□□□□ 0.35
ZC3H4-201ENST00000253048 KCNH5Q8NCM2 988 aa17.26■□□□□ 0.35
ZC3H4-201ENST00000253048 RTN4Q9NQC3 1192 aaKnown RBP17.26■□□□□ 0.35
ZC3H4-201ENST00000253048 NAP1L1P55209 391 aaKnown RBP17.26■□□□□ 0.35
ZC3H4-201ENST00000253048 WDR78Q5VTH9 848 aa17.26■□□□□ 0.35
ZC3H4-201ENST00000253048 CLEC11AQ9Y240 323 aa17.25■□□□□ 0.35
ZC3H4-201ENST00000253048 CUX1P39880 1505 aa17.25■□□□□ 0.35
ZC3H4-201ENST00000253048 CLASRPQ8N2M8 674 aaKnown RBP17.24■□□□□ 0.35
ZC3H4-201ENST00000253048 OFD1O75665 1012 aa17.24■□□□□ 0.35
ZC3H4-201ENST00000253048 RDXP35241 583 aaKnown RBP17.24■□□□□ 0.35
ZC3H4-201ENST00000253048 ERC1Q8IUD2 1116 aa17.24■□□□□ 0.35
ZC3H4-201ENST00000253048 NBPF8Q3BBV2 869 aa17.24■□□□□ 0.35
ZC3H4-201ENST00000253048 NBPF14Q5TI25 921 aa17.24■□□□□ 0.35
ZC3H4-201ENST00000253048 CNTROBQ8N137 903 aa17.24■□□□□ 0.35
ZC3H4-201ENST00000253048 BICD2Q8TD16 824 aa17.24■□□□□ 0.35
ZC3H4-201ENST00000253048 ANKRD50Q9ULJ7 1429 aa17.24■□□□□ 0.35
ZC3H4-201ENST00000253048 SOGA3Q5TF21 947 aa17.24■□□□□ 0.35
ZC3H4-201ENST00000253048 COG6Q9Y2V7 657 aa17.23■□□□□ 0.35
ZC3H4-201ENST00000253048 GNAI3P08754 354 aa17.23■□□□□ 0.35
ZC3H4-201ENST00000253048 HSP90AB2PQ58FF8 381 aa17.23■□□□□ 0.35
ZC3H4-201ENST00000253048 CCAR2Q8N163 923 aaKnown RBP17.23■□□□□ 0.35
ZC3H4-201ENST00000253048 STK11IPQ8N1F8 1099 aa17.23■□□□□ 0.35
ZC3H4-201ENST00000253048 SCLT1Q96NL6 688 aa17.23■□□□□ 0.35
ZC3H4-201ENST00000253048 RAI14Q9P0K7 980 aa17.23■□□□□ 0.35
ZC3H4-201ENST00000253048 MATR3P43243 847 aaKnown RBP eCLIP17.23■□□□□ 0.35
ZC3H4-201ENST00000253048 TSHZ2Q9NRE2 1034 aa17.23■□□□□ 0.35
ZC3H4-201ENST00000253048 CFAP70Q5T0N1 1121 aa17.22■□□□□ 0.35
ZC3H4-201ENST00000253048 ANKIB1Q9P2G1 1089 aa17.22■□□□□ 0.35
ZC3H4-201ENST00000253048 POLD1P28340 1107 aa17.22■□□□□ 0.35
ZC3H4-201ENST00000253048 TRIM21P19474 475 aaKnown RBP17.22■□□□□ 0.35
ZC3H4-201ENST00000253048 EXOC5O00471 708 aa17.22■□□□□ 0.35
ZC3H4-201ENST00000253048 CRACR2BQ8N4Y2 399 aaPredicted RBP17.22■□□□□ 0.35
ZC3H4-201ENST00000253048 SYCP1Q15431 976 aa17.22■□□□□ 0.35
ZC3H4-201ENST00000253048 ZSCAN25Q6NSZ9 544 aa17.22■□□□□ 0.35
ZC3H4-201ENST00000253048 HDGFL1Q5TGJ6 251 aa17.21■□□□□ 0.35
ZC3H4-201ENST00000253048 BTBD11A6QL63 1104 aa17.21■□□□□ 0.35
ZC3H4-201ENST00000253048 PSMA5P28066 241 aa17.21■□□□□ 0.35
ZC3H4-201ENST00000253048 ZNF76P36508 570 aa17.21■□□□□ 0.35
ZC3H4-201ENST00000253048 CABP1Q9NZU7 370 aa17.21■□□□□ 0.35
ZC3H4-201ENST00000253048 SURF6O75683 361 aaKnown RBP17.2■□□□□ 0.34
ZC3H4-201ENST00000253048 TXLNAP40222 546 aa17.2■□□□□ 0.34
ZC3H4-201ENST00000253048 SNAPC4Q5SXM2 1469 aa17.2■□□□□ 0.34
ZC3H4-201ENST00000253048 SMC3Q9UQE7 1217 aa17.19■□□□□ 0.34
ZC3H4-201ENST00000253048 VPS37CA5D8V6 355 aaPredicted RBP17.19■□□□□ 0.34
ZC3H4-201ENST00000253048 INTS3Q68E01 1043 aaKnown RBP17.19■□□□□ 0.34
ZC3H4-201ENST00000253048 SULT6B1Q6IMI4 303 aa17.19■□□□□ 0.34
ZC3H4-201ENST00000253048 FAM161AQ3B820 660 aa17.18■□□□□ 0.34
ZC3H4-201ENST00000253048 ZNF622Q969S3 477 aaKnown RBP eCLIP17.18■□□□□ 0.344e-7■■■□□ 18.9
ZC3H4-201ENST00000253048 HIP1O00291 1037 aa17.18■□□□□ 0.34
ZC3H4-201ENST00000253048 PRKAR2BP31323 418 aa17.18■□□□□ 0.34
ZC3H4-201ENST00000253048 IGF1RP08069 1367 aa17.18■□□□□ 0.34
ZC3H4-201ENST00000253048 PDCL3Q9H2J4 239 aa17.17■□□□□ 0.34
ZC3H4-201ENST00000253048 ZNF428Q96B54 188 aa17.17■□□□□ 0.34
ZC3H4-201ENST00000253048 ARID3AQ99856 593 aa17.17■□□□□ 0.34
ZC3H4-201ENST00000253048 DNAI2Q9GZS0 605 aa17.17■□□□□ 0.34
ZC3H4-201ENST00000253048 MPRIPQ6WCQ1 1025 aa17.16■□□□□ 0.34
ZC3H4-201ENST00000253048 CD109Q6YHK3 1445 aa17.16■□□□□ 0.34
ZC3H4-201ENST00000253048 CCDC73Q6ZRK6 1079 aa17.16■□□□□ 0.34
ZC3H4-201ENST00000253048 CENPQQ7L2Z9 268 aaPredicted RBP17.16■□□□□ 0.34
ZC3H4-201ENST00000253048 LRP2BPQ9P2M1 347 aa17.16■□□□□ 0.34
ZC3H4-201ENST00000253048 VSIG10Q8N0Z9 540 aa17.15■□□□□ 0.34
ZC3H4-201ENST00000253048 NEBLO76041 1014 aa17.15■□□□□ 0.34
ZC3H4-201ENST00000253048 ATP2B1P20020 1258 aa17.15■□□□□ 0.34
ZC3H4-201ENST00000253048 CAVIN4Q5BKX8 364 aa17.15■□□□□ 0.34
ZC3H4-201ENST00000253048 CCDC69A6NI79 296 aa17.15■□□□□ 0.34
ZC3H4-201ENST00000253048 SIL1Q9H173 461 aa17.15■□□□□ 0.34
ZC3H4-201ENST00000253048 TNIP1Q15025 636 aa17.15■□□□□ 0.34
ZC3H4-201ENST00000253048 ZHX3Q9H4I2 956 aa17.15■□□□□ 0.34
ZC3H4-201ENST00000253048 OLFM4Q6UX06 510 aa17.14■□□□□ 0.34
ZC3H4-201ENST00000253048 C8orf37Q96NL8 207 aa17.14■□□□□ 0.34
ZC3H4-201ENST00000253048 CC2D2AQ9P2K1 1620 aa17.14■□□□□ 0.33
ZC3H4-201ENST00000253048 NCAPD3P42695 1498 aa17.14■□□□□ 0.33
ZC3H4-201ENST00000253048 RFC4P35249 363 aa17.14■□□□□ 0.33
ZC3H4-201ENST00000253048 PTCD1O75127 700 aaKnown RBP17.13■□□□□ 0.33
ZC3H4-201ENST00000253048 MSH6P52701 1360 aa17.13■□□□□ 0.33
ZC3H4-201ENST00000253048 RPGRIP1LQ68CZ1 1315 aa17.13■□□□□ 0.33
ZC3H4-201ENST00000253048 PPP4R3AQ6IN85 833 aa17.13■□□□□ 0.33
ZC3H4-201ENST00000253048 ST5P78524 1137 aa17.13■□□□□ 0.33
ZC3H4-201ENST00000253048 ZNF287Q9HBT7 754 aa17.13■□□□□ 0.33
ZC3H4-201ENST00000253048 GOLGA6L3A6NEY3 463 aa17.13■□□□□ 0.33
ZC3H4-201ENST00000253048 TDO2P48775 406 aa17.13■□□□□ 0.33
ZC3H4-201ENST00000253048 DESP17661 470 aa17.12■□□□□ 0.33
ZC3H4-201ENST00000253048 USP5P45974 858 aa17.12■□□□□ 0.33
ZC3H4-201ENST00000253048 MYO1BO43795 1136 aa17.12■□□□□ 0.33
ZC3H4-201ENST00000253048 POLR3DP05423 398 aaPredicted RBP17.12■□□□□ 0.33
ZC3H4-201ENST00000253048 SPINK5Q9NQ38 1064 aaPredicted RBP17.12■□□□□ 0.33
ZC3H4-201ENST00000253048 NESP48681 1621 aa17.12■□□□□ 0.33
ZC3H4-201ENST00000253048 FKBP4Q02790 459 aaKnown RBP eCLIP17.12■□□□□ 0.33
ZC3H4-201ENST00000253048 CCDC173Q0VFZ6 552 aa17.12■□□□□ 0.33
ZC3H4-201ENST00000253048 CEBPAP49715 358 aaPredicted RBP17.11■□□□□ 0.33
ZC3H4-201ENST00000253048 NUP133Q8WUM0 1156 aa17.11■□□□□ 0.33
ZC3H4-201ENST00000253048 CCDC85AQ96PX6 553 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms