RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 CDC42BPGQ6DT37 1551 aa28.38■■■□□ 2.13
RNF39-201ENST00000244360 CPS1P31327 1500 aa28.37■■■□□ 2.13
RNF39-201ENST00000244360 DEKP35659 375 aaKnown RBP28.37■■■□□ 2.13
RNF39-201ENST00000244360 RARSP54136 660 aaKnown RBP28.37■■■□□ 2.13
RNF39-201ENST00000244360 CPSF1Q10570 1443 aaKnown RBP28.36■■■□□ 2.13
RNF39-201ENST00000244360 UBR1Q8IWV7 1749 aa28.36■■■□□ 2.13
RNF39-201ENST00000244360 MYH16Q9H6N6 1097 aa28.35■■■□□ 2.13
RNF39-201ENST00000244360 HDGFP51858 240 aaKnown RBP28.35■■■□□ 2.13
RNF39-201ENST00000244360 NBR1Q14596 966 aa28.35■■■□□ 2.13
RNF39-201ENST00000244360 WASLO00401 505 aaPredicted RBP28.33■■■□□ 2.13
RNF39-201ENST00000244360 RTL5Q5HYW3 569 aaPredicted RBP28.33■■■□□ 2.13
RNF39-201ENST00000244360 TMEM2Q9UHN6 1383 aa28.33■■■□□ 2.13
RNF39-201ENST00000244360 EDC4Q6P2E9 1401 aaKnown RBP28.32■■■□□ 2.12
RNF39-201ENST00000244360 U2SURPO15042 1029 aaKnown RBP28.31■■■□□ 2.12
RNF39-201ENST00000244360 SKAP1Q86WV1 359 aa28.31■■■□□ 2.12
RNF39-201ENST00000244360 DIAPH1O60610 1272 aaKnown RBP28.3■■■□□ 2.12
RNF39-201ENST00000244360 TMPOP42166 694 aaKnown RBP28.3■■■□□ 2.12
RNF39-201ENST00000244360 NPM2Q86SE8 214 aaKnown RBP28.3■■■□□ 2.12
RNF39-201ENST00000244360 PPIP5K1Q6PFW1 1433 aa28.3■■■□□ 2.12
RNF39-201ENST00000244360 CT47B1P0C2W7 299 aaPredicted RBP28.28■■■□□ 2.12
RNF39-201ENST00000244360 DDRGK1Q96HY6 314 aa28.27■■■□□ 2.12
RNF39-201ENST00000244360 CANXP27824 592 aaKnown RBP28.27■■■□□ 2.12
RNF39-201ENST00000244360 TRIM35Q9UPQ4 493 aa28.27■■■□□ 2.12
RNF39-201ENST00000244360 IL16Q14005 1332 aa28.27■■■□□ 2.12
RNF39-201ENST00000244360 MAPK8IP3Q9UPT6 1336 aa28.27■■■□□ 2.12
RNF39-201ENST00000244360 TXNDC2Q86VQ3 553 aa28.26■■■□□ 2.11
RNF39-201ENST00000244360 AAMPQ13685 434 aa28.26■■■□□ 2.11
RNF39-201ENST00000244360 PANK1Q8TE04 598 aa28.26■■■□□ 2.11
RNF39-201ENST00000244360 PNNQ9H307 717 aaKnown RBP28.26■■■□□ 2.11
RNF39-201ENST00000244360 MON2Q7Z3U7 1717 aa28.25■■■□□ 2.11
RNF39-201ENST00000244360 ADAMTS13Q76LX8 1427 aa28.25■■■□□ 2.11
RNF39-201ENST00000244360 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.24■■■□□ 2.11
RNF39-201ENST00000244360 CLUAP1Q96AJ1 413 aa28.24■■■□□ 2.11
RNF39-201ENST00000244360 POLKQ9UBT6 870 aa28.24■■■□□ 2.11
RNF39-201ENST00000244360 LRRC7Q96NW7 1537 aa28.23■■■□□ 2.11
RNF39-201ENST00000244360 COG6Q9Y2V7 657 aa28.23■■■□□ 2.11
RNF39-201ENST00000244360 FCHSD2O94868 740 aa28.22■■■□□ 2.11
RNF39-201ENST00000244360 NUDT16Q96DE0 195 aaKnown RBP28.22■■■□□ 2.11
RNF39-201ENST00000244360 FRAT1Q92837 279 aaPredicted RBP28.21■■■□□ 2.11
RNF39-201ENST00000244360 AKAP12Q02952 1782 aa28.21■■■□□ 2.11
RNF39-201ENST00000244360 AATKQ6ZMQ8 1374 aa28.2■■■□□ 2.11
RNF39-201ENST00000244360 PLEKHG1Q9ULL1 1385 aa28.2■■■□□ 2.11
RNF39-201ENST00000244360 CCDC61Q9Y6R9 512 aa28.2■■■□□ 2.1
RNF39-201ENST00000244360 CDK12Q9NYV4 1490 aaPredicted RBP28.19■■■□□ 2.1
RNF39-201ENST00000244360 USP35Q9P2H5 1018 aa28.19■■■□□ 2.1
RNF39-201ENST00000244360 ROBO2Q9HCK4 1378 aa28.18■■■□□ 2.1
RNF39-201ENST00000244360 C3P01024 1663 aa28.18■■■□□ 2.1
RNF39-201ENST00000244360 IGHDP01880 384 aa28.18■■■□□ 2.1
RNF39-201ENST00000244360 MAP2P11137 1827 aaKnown RBP28.18■■■□□ 2.1
RNF39-201ENST00000244360 RSPH6AQ9H0K4 717 aa28.17■■■□□ 2.1
RNF39-201ENST00000244360 RLBP1P12271 317 aa28.16■■■□□ 2.1
RNF39-201ENST00000244360 ITSN1Q15811 1721 aa28.16■■■□□ 2.1
RNF39-201ENST00000244360 PPM1GO15355 546 aaPredicted RBP28.16■■■□□ 2.1
RNF39-201ENST00000244360 RIPK4P57078 832 aa28.16■■■□□ 2.1
RNF39-201ENST00000244360 TSR2Q969E8 191 aaKnown RBP28.16■■■□□ 2.1
RNF39-201ENST00000244360 NME9Q86XW9 330 aa28.15■■■□□ 2.1
RNF39-201ENST00000244360 FAM161AQ3B820 660 aa28.14■■■□□ 2.1
RNF39-201ENST00000244360 BCL2L13Q9BXK5 485 aa28.14■■■□□ 2.1
RNF39-201ENST00000244360 PRR36Q9H6K5 1346 aa28.14■■■□□ 2.1
RNF39-201ENST00000244360 EXOSC9Q06265 439 aaKnown RBP28.13■■■□□ 2.09
RNF39-201ENST00000244360 TNNQ9UQP3 1299 aa28.13■■■□□ 2.09
RNF39-201ENST00000244360 TOPAZ1Q8N9V7 1692 aa28.12■■■□□ 2.09
RNF39-201ENST00000244360 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.12■■■□□ 2.09
RNF39-201ENST00000244360 FBLN1P23142 703 aa28.12■■■□□ 2.09
RNF39-201ENST00000244360 C8orf34Q49A92 452 aa28.12■■■□□ 2.09
RNF39-201ENST00000244360 ZNF692Q9BU19 519 aaPredicted RBP28.11■■■□□ 2.09
RNF39-201ENST00000244360 LTKP29376 864 aa28.11■■■□□ 2.09
RNF39-201ENST00000244360 NCKAP5LQ9HCH0 1330 aa28.11■■■□□ 2.09
RNF39-201ENST00000244360 PRKAR2BP31323 418 aa28.1■■■□□ 2.09
RNF39-201ENST00000244360 ZKSCAN2Q63HK3 967 aa28.1■■■□□ 2.09
RNF39-201ENST00000244360 EMILIN1Q9Y6C2 1016 aa28.1■■■□□ 2.09
RNF39-201ENST00000244360 SLIT1O75093 1534 aa28.1■■■□□ 2.09
RNF39-201ENST00000244360 IL13P35225 146 aa28.1■■■□□ 2.09
RNF39-201ENST00000244360 ARHGAP23Q9P227 1491 aa28.1■■■□□ 2.09
RNF39-201ENST00000244360 NRKQ7Z2Y5 1582 aa28.09■■■□□ 2.09
RNF39-201ENST00000244360 PMFBP1Q8TBY8 1022 aa28.09■■■□□ 2.09
RNF39-201ENST00000244360 COG3Q96JB2 828 aa28.08■■■□□ 2.09
RNF39-201ENST00000244360 ZRANB1Q9UGI0 708 aa28.08■■■□□ 2.09
RNF39-201ENST00000244360 MVPQ14764 893 aaKnown RBP28.07■■■□□ 2.08
RNF39-201ENST00000244360 RGS3P49796 1198 aa28.07■■■□□ 2.08
RNF39-201ENST00000244360 SMC4Q9NTJ3 1288 aa28.06■■■□□ 2.08
RNF39-201ENST00000244360 PCDHB15Q9Y5E8 787 aa28.06■■■□□ 2.08
RNF39-201ENST00000244360 VIRMAQ69YN4 1812 aaKnown RBP28.05■■■□□ 2.08
RNF39-201ENST00000244360 PTPRUQ92729 1446 aa28.05■■■□□ 2.08
RNF39-201ENST00000244360 NFE2L2Q16236 605 aa28.05■■■□□ 2.08
RNF39-201ENST00000244360 SSH1Q8WYL5 1049 aa28.05■■■□□ 2.08
RNF39-201ENST00000244360 DZIP1LQ8IYY4 767 aaKnown RBP28.04■■■□□ 2.08
RNF39-201ENST00000244360 NEFMP07197 916 aa28.04■■■□□ 2.08
RNF39-201ENST00000244360 PLEKHG3A1L390 1219 aa28.02■■■□□ 2.08
RNF39-201ENST00000244360 CEBPAP49715 358 aaPredicted RBP28.02■■■□□ 2.08
RNF39-201ENST00000244360 PHACTR3Q96KR7 559 aa28.02■■■□□ 2.08
RNF39-201ENST00000244360 LAS1LQ9Y4W2 734 aaKnown RBP28.01■■■□□ 2.07
RNF39-201ENST00000244360 FTSJ3Q8IY81 847 aaKnown RBP28■■■□□ 2.07
RNF39-201ENST00000244360 TRIM27P14373 513 aa28■■■□□ 2.07
RNF39-201ENST00000244360 EID1Q9Y6B2 187 aa28■■■□□ 2.07
RNF39-201ENST00000244360 OVOS2A0A0J9YW53 1432 aa27.99■■■□□ 2.07
RNF39-201ENST00000244360 PTCH1Q13635 1447 aa27.99■■■□□ 2.07
RNF39-201ENST00000244360 OVOS2Q6IE36 1432 aa27.99■■■□□ 2.07
RNF39-201ENST00000244360 HMOX1P09601 288 aa27.99■■■□□ 2.07
RNF39-201ENST00000244360 FER1L4A9Z1Z3 1794 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms