RNA–Protein interactions for RNA: ENST00000243103.3

HOXC12-201, Transcript of homeobox C12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC12, Length 3,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12-201ENST00000243103 TARBP1Q13395 1621 aaKnown RBP18.46■□□□□ 0.54
HOXC12-201ENST00000243103 NKTRP30414 1462 aaKnown RBP18.45■□□□□ 0.54
HOXC12-201ENST00000243103 KIAA0556O60303 1618 aa18.45■□□□□ 0.54
HOXC12-201ENST00000243103 CFAP65Q6ZU64 1925 aaKnown RBP18.45■□□□□ 0.54
HOXC12-201ENST00000243103 K7ELQ4 463 aaPredicted RBP18.45■□□□□ 0.54
HOXC12-201ENST00000243103 RAPGEF3O95398 923 aa18.45■□□□□ 0.54
HOXC12-201ENST00000243103 RAB3GAP1Q15042 981 aa18.45■□□□□ 0.54
HOXC12-201ENST00000243103 DZIP1LQ8IYY4 767 aaKnown RBP18.44■□□□□ 0.54
HOXC12-201ENST00000243103 NOL7Q9UMY1 257 aaKnown RBP18.44■□□□□ 0.54
HOXC12-201ENST00000243103 ADAMTS12P58397 1594 aa18.44■□□□□ 0.54
HOXC12-201ENST00000243103 SCAPERQ9BY12 1400 aa18.44■□□□□ 0.54
HOXC12-201ENST00000243103 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.44■□□□□ 0.54
HOXC12-201ENST00000243103 POLR1AO95602 1720 aaPredicted RBP18.44■□□□□ 0.54
HOXC12-201ENST00000243103 DNMT1P26358 1616 aaKnown RBP18.44■□□□□ 0.54
HOXC12-201ENST00000243103 PRAG1Q86YV5 1406 aa18.43■□□□□ 0.54
HOXC12-201ENST00000243103 ZNF692Q9BU19 519 aaPredicted RBP18.43■□□□□ 0.54
HOXC12-201ENST00000243103 NAA30Q147X3 362 aaPredicted RBP18.42■□□□□ 0.54
HOXC12-201ENST00000243103 LARP6Q9BRS8 491 aaKnown RBP18.42■□□□□ 0.54
HOXC12-201ENST00000243103 CSPP1Q1MSJ5 1256 aa18.42■□□□□ 0.54
HOXC12-201ENST00000243103 PPP1R9BQ96SB3 815 aa18.41■□□□□ 0.54
HOXC12-201ENST00000243103 KIF3AQ9Y496 699 aa18.41■□□□□ 0.54
HOXC12-201ENST00000243103 A2MP01023 1474 aa18.41■□□□□ 0.54
HOXC12-201ENST00000243103 CHMP4CQ96CF2 233 aa18.41■□□□□ 0.54
HOXC12-201ENST00000243103 SYCP2Q9BX26 1530 aa18.41■□□□□ 0.54
HOXC12-201ENST00000243103 KLHL40Q2TBA0 621 aa18.4■□□□□ 0.54
HOXC12-201ENST00000243103 TRMT2AQ8IZ69 625 aaKnown RBP18.4■□□□□ 0.54
HOXC12-201ENST00000243103 TMEM63CQ9P1W3 806 aa18.4■□□□□ 0.54
HOXC12-201ENST00000243103 CCDC39Q9UFE4 941 aa18.4■□□□□ 0.54
HOXC12-201ENST00000243103 ZKSCAN2Q63HK3 967 aa18.39■□□□□ 0.54
HOXC12-201ENST00000243103 EXOSC9Q06265 439 aaKnown RBP18.39■□□□□ 0.53
HOXC12-201ENST00000243103 TMX1Q9H3N1 280 aa18.39■□□□□ 0.53
HOXC12-201ENST00000243103 IFT140Q96RY7 1462 aa18.39■□□□□ 0.53
HOXC12-201ENST00000243103 UHRF1BP1Q6BDS2 1440 aa18.38■□□□□ 0.53
HOXC12-201ENST00000243103 NLRP1Q9C000 1473 aa18.38■□□□□ 0.53
HOXC12-201ENST00000243103 MAGI2Q86UL8 1455 aa18.38■□□□□ 0.53
HOXC12-201ENST00000243103 ZNF710Q8N1W2 664 aa18.38■□□□□ 0.53
HOXC12-201ENST00000243103 PBRM1Q86U86 1689 aa18.38■□□□□ 0.53
HOXC12-201ENST00000243103 DRC7Q8IY82 874 aa18.38■□□□□ 0.53
HOXC12-201ENST00000243103 TRAPPC8Q9Y2L5 1435 aa18.37■□□□□ 0.53
HOXC12-201ENST00000243103 BCL2L12Q9HB09 334 aa18.37■□□□□ 0.53
HOXC12-201ENST00000243103 TMEM51Q9NW97 253 aa18.37■□□□□ 0.53
HOXC12-201ENST00000243103 TMEM57Q8N5G2 664 aa18.37■□□□□ 0.53
HOXC12-201ENST00000243103 CHAF1AQ13111 956 aaPredicted RBP18.36■□□□□ 0.53
HOXC12-201ENST00000243103 MVPQ14764 893 aaKnown RBP18.36■□□□□ 0.53
HOXC12-201ENST00000243103 GPT2Q8TD30 523 aa18.36■□□□□ 0.53
HOXC12-201ENST00000243103 NOB1Q9ULX3 412 aaKnown RBP18.36■□□□□ 0.53
HOXC12-201ENST00000243103 FAM135AQ9P2D6 1515 aa18.36■□□□□ 0.53
HOXC12-201ENST00000243103 PLA2R1Q13018 1463 aa18.36■□□□□ 0.53
HOXC12-201ENST00000243103 CDCA8Q53HL2 280 aa18.36■□□□□ 0.53
HOXC12-201ENST00000243103 AK9Q5TCS8 1911 aa18.35■□□□□ 0.53
HOXC12-201ENST00000243103 DCTN1Q14203 1278 aa18.35■□□□□ 0.53
HOXC12-201ENST00000243103 CCDC27Q2M243 656 aa18.35■□□□□ 0.53
HOXC12-201ENST00000243103 TBC1D9Q6ZT07 1266 aa18.35■□□□□ 0.53
HOXC12-201ENST00000243103 NECTIN2Q92692 538 aa18.35■□□□□ 0.53
HOXC12-201ENST00000243103 ISY1Q9ULR0 285 aaKnown RBP18.35■□□□□ 0.53
HOXC12-201ENST00000243103 NOLC1Q14978 699 aaKnown RBP eCLIP18.34■□□□□ 0.53
HOXC12-201ENST00000243103 CEP170Q5SW79 1584 aa18.34■□□□□ 0.53
HOXC12-201ENST00000243103 MTERF4Q7Z6M4 381 aaKnown RBP18.34■□□□□ 0.53
HOXC12-201ENST00000243103 NCKAP5LQ9HCH0 1330 aa18.33■□□□□ 0.53
HOXC12-201ENST00000243103 HCLS1P14317 486 aaPredicted RBP18.33■□□□□ 0.52
HOXC12-201ENST00000243103 SYNJ2O15056 1496 aa18.33■□□□□ 0.52
HOXC12-201ENST00000243103 TRIM27P14373 513 aa18.33■□□□□ 0.52
HOXC12-201ENST00000243103 C16orf45Q96MC5 204 aaPredicted RBP18.33■□□□□ 0.52
HOXC12-201ENST00000243103 TNNT3P45378 269 aaPredicted RBP18.32■□□□□ 0.52
HOXC12-201ENST00000243103 EIF4G3O43432 1585 aaKnown RBP18.32■□□□□ 0.52
HOXC12-201ENST00000243103 SMC5Q8IY18 1101 aa18.32■□□□□ 0.52
HOXC12-201ENST00000243103 LMBRD1Q9NUN5 540 aa18.32■□□□□ 0.52
HOXC12-201ENST00000243103 NPM1P06748 294 aaKnown RBP eCLIP18.31■□□□□ 0.52
HOXC12-201ENST00000243103 C16orf71Q8IYS4 520 aaPredicted RBP18.31■□□□□ 0.52
HOXC12-201ENST00000243103 CCDC141Q6ZP82 1450 aa18.31■□□□□ 0.52
HOXC12-201ENST00000243103 KIF16BQ96L93 1317 aa18.31■□□□□ 0.52
HOXC12-201ENST00000243103 ZRANB1Q9UGI0 708 aa18.31■□□□□ 0.52
HOXC12-201ENST00000243103 UGGT1Q9NYU2 1555 aa18.31■□□□□ 0.52
HOXC12-201ENST00000243103 RIOK3O14730 519 aaKnown RBP18.3■□□□□ 0.52
HOXC12-201ENST00000243103 SMARCA5O60264 1052 aaPredicted RBP18.3■□□□□ 0.52
HOXC12-201ENST00000243103 ZNF500O60304 480 aaPredicted RBP18.3■□□□□ 0.52
HOXC12-201ENST00000243103 SSH1Q8WYL5 1049 aa18.3■□□□□ 0.52
HOXC12-201ENST00000243103 CFAP53Q96M91 514 aa18.3■□□□□ 0.52
HOXC12-201ENST00000243103 TAOK2Q9UL54 1235 aa18.3■□□□□ 0.52
HOXC12-201ENST00000243103 TRIM6-TRIM34B2RNG4 842 aa18.29■□□□□ 0.52
HOXC12-201ENST00000243103 TRIM34Q9BYJ4 488 aa18.29■□□□□ 0.52
HOXC12-201ENST00000243103 TSHZ3Q63HK5 1081 aa18.29■□□□□ 0.52
HOXC12-201ENST00000243103 TSPY26PQ9H489 355 aa18.29■□□□□ 0.52
HOXC12-201ENST00000243103 ADCY5O95622 1261 aa18.29■□□□□ 0.52
HOXC12-201ENST00000243103 MYRIPQ8NFW9 859 aa18.29■□□□□ 0.52
HOXC12-201ENST00000243103 IFT57Q9NWB7 429 aa18.29■□□□□ 0.52
HOXC12-201ENST00000243103 NSD3Q9BZ95 1437 aa18.29■□□□□ 0.52
HOXC12-201ENST00000243103 CHD1LQ86WJ1 897 aa18.28■□□□□ 0.52
HOXC12-201ENST00000243103 WAPLQ7Z5K2 1190 aa18.28■□□□□ 0.52
HOXC12-201ENST00000243103 FBXW7Q969H0 707 aa18.28■□□□□ 0.52
HOXC12-201ENST00000243103 RTF1Q92541 710 aaKnown RBP18.28■□□□□ 0.52
HOXC12-201ENST00000243103 GADD45BO75293 160 aaPredicted RBP18.27■□□□□ 0.52
HOXC12-201ENST00000243103 SYTL4Q96C24 671 aaPredicted RBP18.27■□□□□ 0.52
HOXC12-201ENST00000243103 ATAD2Q6PL18 1390 aa18.27■□□□□ 0.52
HOXC12-201ENST00000243103 NEK4P51957 841 aa18.27■□□□□ 0.51
HOXC12-201ENST00000243103 FBXO31Q5XUX0 539 aaPredicted RBP18.27■□□□□ 0.51
HOXC12-201ENST00000243103 ST7Q9NRC1 585 aa18.26■□□□□ 0.51
HOXC12-201ENST00000243103 COL17A1Q9UMD9 1497 aaPredicted RBP18.26■□□□□ 0.51
HOXC12-201ENST00000243103 UPF3BQ9BZI7 483 aaKnown RBP18.26■□□□□ 0.51
HOXC12-201ENST00000243103 MIS18AQ9NYP9 233 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms