RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 PDZRN3Q9UPQ7 1066 aa20.81■□□□□ 0.92
LTBR-201ENST00000228918 MINK1Q8N4C8 1332 aaPredicted RBP20.81■□□□□ 0.92
LTBR-201ENST00000228918 U2SURPO15042 1029 aaKnown RBP20.8■□□□□ 0.92
LTBR-201ENST00000228918 FYB1O15117 783 aa20.8■□□□□ 0.92
LTBR-201ENST00000228918 TSR2Q969E8 191 aaKnown RBP20.8■□□□□ 0.92
LTBR-201ENST00000228918 PRAM1Q96QH2 718 aa20.8■□□□□ 0.92
LTBR-201ENST00000228918 DNAJC5Q9H3Z4 198 aa20.8■□□□□ 0.92
LTBR-201ENST00000228918 RWDD1Q9H446 243 aaPredicted RBP20.8■□□□□ 0.92
LTBR-201ENST00000228918 ALKQ9UM73 1620 aa20.8■□□□□ 0.92
LTBR-201ENST00000228918 TRIM35Q9UPQ4 493 aa20.8■□□□□ 0.92
LTBR-201ENST00000228918 DZIP1LQ8IYY4 767 aaKnown RBP20.79■□□□□ 0.92
LTBR-201ENST00000228918 SENP3Q9H4L4 574 aaPredicted RBP20.79■□□□□ 0.92
LTBR-201ENST00000228918 ARHGEF40Q8TER5 1519 aa20.78■□□□□ 0.92
LTBR-201ENST00000228918 EXOSC9Q06265 439 aaKnown RBP20.78■□□□□ 0.92
LTBR-201ENST00000228918 GSE1Q14687 1217 aa20.78■□□□□ 0.92
LTBR-201ENST00000228918 FTSJ3Q8IY81 847 aaKnown RBP20.78■□□□□ 0.92
LTBR-201ENST00000228918 IL16Q14005 1332 aa20.77■□□□□ 0.92
LTBR-201ENST00000228918 POGKQ9P215 609 aa20.77■□□□□ 0.92
LTBR-201ENST00000228918 PNPLA6Q8IY17 1366 aa20.77■□□□□ 0.91
LTBR-201ENST00000228918 CDC42BPGQ6DT37 1551 aa20.77■□□□□ 0.91
LTBR-201ENST00000228918 SMC4Q9NTJ3 1288 aa20.76■□□□□ 0.91
LTBR-201ENST00000228918 HDGFL2Q7Z4V5 671 aaPredicted RBP20.74■□□□□ 0.91
LTBR-201ENST00000228918 TRIM27P14373 513 aa20.74■□□□□ 0.91
LTBR-201ENST00000228918 SSH1Q8WYL5 1049 aa20.74■□□□□ 0.91
LTBR-201ENST00000228918 FRAT2O75474 233 aaPredicted RBP20.73■□□□□ 0.91
LTBR-201ENST00000228918 BECN1Q14457 450 aa20.73■□□□□ 0.91
LTBR-201ENST00000228918 DIAPH1O60610 1272 aaKnown RBP20.73■□□□□ 0.91
LTBR-201ENST00000228918 LRRC7Q96NW7 1537 aa20.72■□□□□ 0.91
LTBR-201ENST00000228918 FBXO31Q5XUX0 539 aaPredicted RBP20.72■□□□□ 0.91
LTBR-201ENST00000228918 CDK19Q9BWU1 502 aa20.72■□□□□ 0.91
LTBR-201ENST00000228918 DLC1Q96QB1 1528 aa20.72■□□□□ 0.91
LTBR-201ENST00000228918 TBC1D32Q96NH3 1257 aa20.71■□□□□ 0.91
LTBR-201ENST00000228918 RIMBP3CA6NJZ7 1639 aa20.71■□□□□ 0.91
LTBR-201ENST00000228918 RIMBP3BA6NNM3 1639 aa20.71■□□□□ 0.91
LTBR-201ENST00000228918 RIMBP3Q9UFD9 1639 aa20.71■□□□□ 0.91
LTBR-201ENST00000228918 RIPK4P57078 832 aa20.71■□□□□ 0.91
LTBR-201ENST00000228918 ATF7IPQ6VMQ6 1270 aa20.71■□□□□ 0.91
LTBR-201ENST00000228918 UPF2Q9HAU5 1272 aaKnown RBP20.71■□□□□ 0.91
LTBR-201ENST00000228918 DDX19BQ9UMR2 479 aa20.71■□□□□ 0.91
LTBR-201ENST00000228918 SETD1AO15047 1707 aaKnown RBP20.7■□□□□ 0.9
LTBR-201ENST00000228918 HDAC1Q13547 482 aaPredicted RBP20.7■□□□□ 0.9
LTBR-201ENST00000228918 PNNQ9H307 717 aaKnown RBP20.7■□□□□ 0.9
LTBR-201ENST00000228918 CABP1Q9NZU7 370 aa20.69■□□□□ 0.9
LTBR-201ENST00000228918 ATP7BP35670 1465 aa20.69■□□□□ 0.9
LTBR-201ENST00000228918 RTN4Q9NQC3 1192 aaKnown RBP20.69■□□□□ 0.9
LTBR-201ENST00000228918 FAM135BQ49AJ0 1406 aa20.67■□□□□ 0.9
LTBR-201ENST00000228918 ITPRIPQ8IWB1 547 aa20.67■□□□□ 0.9
LTBR-201ENST00000228918 REREQ9P2R6 1566 aa20.67■□□□□ 0.9
LTBR-201ENST00000228918 NOB1Q9ULX3 412 aaKnown RBP20.67■□□□□ 0.9
LTBR-201ENST00000228918 KIF16BQ96L93 1317 aa20.67■□□□□ 0.9
LTBR-201ENST00000228918 FCHSD2O94868 740 aa20.66■□□□□ 0.9
LTBR-201ENST00000228918 A2ML1A8K2U0 1454 aa20.65■□□□□ 0.9
LTBR-201ENST00000228918 TMEM57Q8N5G2 664 aa20.65■□□□□ 0.9
LTBR-201ENST00000228918 STAG3Q9UJ98 1225 aa20.65■□□□□ 0.9
LTBR-201ENST00000228918 MAP2P11137 1827 aaKnown RBP20.64■□□□□ 0.89
LTBR-201ENST00000228918 RSPH6AQ9H0K4 717 aa20.64■□□□□ 0.89
LTBR-201ENST00000228918 AGLP35573 1532 aa20.64■□□□□ 0.89
LTBR-201ENST00000228918 SPATA31D1Q6ZQQ2 1576 aa20.64■□□□□ 0.89
LTBR-201ENST00000228918 ALDH1L2Q3SY69 923 aa20.64■□□□□ 0.89
LTBR-201ENST00000228918 PPIP5K1Q6PFW1 1433 aa20.63■□□□□ 0.89
LTBR-201ENST00000228918 SMC5Q8IY18 1101 aa20.63■□□□□ 0.89
LTBR-201ENST00000228918 CYB5RLQ6IPT4 315 aa20.62■□□□□ 0.89
LTBR-201ENST00000228918 ZBTB40Q9NUA8 1239 aa20.62■□□□□ 0.89
LTBR-201ENST00000228918 IPO8O15397 1037 aaKnown RBP20.62■□□□□ 0.89
LTBR-201ENST00000228918 ANTXR1Q9H6X2 564 aa20.62■□□□□ 0.89
LTBR-201ENST00000228918 POLKQ9UBT6 870 aa20.62■□□□□ 0.89
LTBR-201ENST00000228918 PRKAR2BP31323 418 aa20.61■□□□□ 0.89
LTBR-201ENST00000228918 TBC1D2Q9BYX2 928 aa20.61■□□□□ 0.89
LTBR-201ENST00000228918 SLKQ9H2G2 1235 aaPredicted RBP20.61■□□□□ 0.89
LTBR-201ENST00000228918 RIMS2Q9UQ26 1411 aa20.61■□□□□ 0.89
LTBR-201ENST00000228918 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.61■□□□□ 0.89
LTBR-201ENST00000228918 WAPLQ7Z5K2 1190 aa20.6■□□□□ 0.89
LTBR-201ENST00000228918 DIP2BQ9P265 1576 aa20.59■□□□□ 0.89
LTBR-201ENST00000228918 PPP6R1Q9UPN7 881 aa20.59■□□□□ 0.89
LTBR-201ENST00000228918 NRXN3Q9Y4C0 1643 aa20.59■□□□□ 0.89
LTBR-201ENST00000228918 FBLN1P23142 703 aa20.58■□□□□ 0.88
LTBR-201ENST00000228918 BRPF1P55201 1214 aaPredicted RBP20.58■□□□□ 0.88
LTBR-201ENST00000228918 CPSF1Q10570 1443 aaKnown RBP20.58■□□□□ 0.88
LTBR-201ENST00000228918 ZNF428Q96B54 188 aa20.58■□□□□ 0.88
LTBR-201ENST00000228918 EDC4Q6P2E9 1401 aaKnown RBP20.57■□□□□ 0.88
LTBR-201ENST00000228918 CDK12Q9NYV4 1490 aaPredicted RBP20.57■□□□□ 0.88
LTBR-201ENST00000228918 NFE2L2Q16236 605 aa20.57■□□□□ 0.88
LTBR-201ENST00000228918 BRPF3Q9ULD4 1205 aa20.57■□□□□ 0.88
LTBR-201ENST00000228918 C22orf23Q9BZE7 217 aa20.56■□□□□ 0.88
LTBR-201ENST00000228918 TSPOAP1O95153 1857 aa20.55■□□□□ 0.88
LTBR-201ENST00000228918 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.55■□□□□ 0.88
LTBR-201ENST00000228918 PHACTR3Q96KR7 559 aa20.55■□□□□ 0.88
LTBR-201ENST00000228918 MON2Q7Z3U7 1717 aa20.54■□□□□ 0.88
LTBR-201ENST00000228918 MFAP1P55081 439 aaKnown RBP20.54■□□□□ 0.88
LTBR-201ENST00000228918 PTCH1Q13635 1447 aa20.54■□□□□ 0.88
LTBR-201ENST00000228918 HMOX1P09601 288 aa20.53■□□□□ 0.88
LTBR-201ENST00000228918 NUCB1Q02818 461 aa20.53■□□□□ 0.88
LTBR-201ENST00000228918 KNDC1Q76NI1 1749 aa20.53■□□□□ 0.88
LTBR-201ENST00000228918 PIK3R4Q99570 1358 aa20.53■□□□□ 0.88
LTBR-201ENST00000228918 DLG5Q8TDM6 1919 aa20.53■□□□□ 0.88
LTBR-201ENST00000228918 EMILIN1Q9Y6C2 1016 aa20.53■□□□□ 0.88
LTBR-201ENST00000228918 IL13P35225 146 aa20.52■□□□□ 0.88
LTBR-201ENST00000228918 CALD1Q05682 793 aaKnown RBP20.52■□□□□ 0.88
LTBR-201ENST00000228918 FAM69CQ0P6D2 419 aa20.52■□□□□ 0.88
LTBR-201ENST00000228918 UBE2Q2Q8WVN8 375 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms