RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 AAMPQ13685 434 aa22.39■■□□□ 1.18
CDKN1B-201ENST00000228872 ERBB4Q15303 1308 aa22.39■■□□□ 1.18
CDKN1B-201ENST00000228872 CDCA8Q53HL2 280 aa22.39■■□□□ 1.17
CDKN1B-201ENST00000228872 MYOM1P52179 1685 aa22.38■■□□□ 1.17
CDKN1B-201ENST00000228872 TNRQ92752 1358 aa22.38■■□□□ 1.17
CDKN1B-201ENST00000228872 ISY1Q9ULR0 285 aaKnown RBP22.37■■□□□ 1.17
CDKN1B-201ENST00000228872 UBR1Q8IWV7 1749 aa22.36■■□□□ 1.17
CDKN1B-201ENST00000228872 DDX11L8A8MPP1 907 aa22.35■■□□□ 1.17
CDKN1B-201ENST00000228872 WWC1Q8IX03 1113 aa22.35■■□□□ 1.17
CDKN1B-201ENST00000228872 STAG3Q9UJ98 1225 aa22.35■■□□□ 1.17
CDKN1B-201ENST00000228872 SLC24A1O60721 1099 aa22.34■■□□□ 1.17
CDKN1B-201ENST00000228872 RLBP1P12271 317 aa22.34■■□□□ 1.17
CDKN1B-201ENST00000228872 C22orf23Q9BZE7 217 aa22.34■■□□□ 1.17
CDKN1B-201ENST00000228872 ARHGEF28Q8N1W1 1705 aaKnown RBP22.34■■□□□ 1.17
CDKN1B-201ENST00000228872 SBNO2Q9Y2G9 1366 aa22.34■■□□□ 1.17
CDKN1B-201ENST00000228872 RARSP54136 660 aaKnown RBP22.34■■□□□ 1.17
CDKN1B-201ENST00000228872 QRICH2Q9H0J4 1663 aa22.33■■□□□ 1.17
CDKN1B-201ENST00000228872 NUTM2DQ5VT03 806 aaPredicted RBP22.33■■□□□ 1.17
CDKN1B-201ENST00000228872 TNNQ9UQP3 1299 aa22.33■■□□□ 1.17
CDKN1B-201ENST00000228872 ZNF692Q9BU19 519 aaPredicted RBP22.33■■□□□ 1.16
CDKN1B-201ENST00000228872 RWDD1Q9H446 243 aaPredicted RBP22.33■■□□□ 1.16
CDKN1B-201ENST00000228872 RIMS2Q9UQ26 1411 aa22.33■■□□□ 1.16
CDKN1B-201ENST00000228872 ALKQ9UM73 1620 aa22.31■■□□□ 1.16
CDKN1B-201ENST00000228872 SETD1AO15047 1707 aaKnown RBP22.3■■□□□ 1.16
CDKN1B-201ENST00000228872 MFAP1P55081 439 aaKnown RBP22.3■■□□□ 1.16
CDKN1B-201ENST00000228872 TPM2P07951 284 aa22.29■■□□□ 1.16
CDKN1B-201ENST00000228872 TRIM44Q96DX7 344 aaPredicted RBP22.29■■□□□ 1.16
CDKN1B-201ENST00000228872 HSCBQ8IWL3 235 aa22.28■■□□□ 1.16
CDKN1B-201ENST00000228872 TMEM132EQ6IEE7 984 aa22.27■■□□□ 1.16
CDKN1B-201ENST00000228872 NCOA3Q9Y6Q9 1424 aa22.27■■□□□ 1.15
CDKN1B-201ENST00000228872 DDIT3P35638 169 aa22.26■■□□□ 1.15
CDKN1B-201ENST00000228872 NRXN3Q9Y4C0 1643 aa22.26■■□□□ 1.15
CDKN1B-201ENST00000228872 GAS2L3Q86XJ1 694 aa22.25■■□□□ 1.15
CDKN1B-201ENST00000228872 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.25■■□□□ 1.15
CDKN1B-201ENST00000228872 ADAMTSL3P82987 1691 aa22.25■■□□□ 1.15
CDKN1B-201ENST00000228872 TRAK1Q9UPV9 953 aa22.24■■□□□ 1.15
CDKN1B-201ENST00000228872 BCL2L13Q9BXK5 485 aa22.24■■□□□ 1.15
CDKN1B-201ENST00000228872 RIMS1Q86UR5 1692 aaKnown RBP22.24■■□□□ 1.15
CDKN1B-201ENST00000228872 POLR3AO14802 1390 aaPredicted RBP22.22■■□□□ 1.15
CDKN1B-201ENST00000228872 CEBPAP49715 358 aaPredicted RBP22.22■■□□□ 1.15
CDKN1B-201ENST00000228872 PTPRMP28827 1452 aa22.22■■□□□ 1.15
CDKN1B-201ENST00000228872 TMEM2Q9UHN6 1383 aa22.21■■□□□ 1.15
CDKN1B-201ENST00000228872 HDGFP51858 240 aaKnown RBP22.21■■□□□ 1.15
CDKN1B-201ENST00000228872 PDCL3Q9H2J4 239 aa22.21■■□□□ 1.15
CDKN1B-201ENST00000228872 NEUROD2Q15784 382 aa22.21■■□□□ 1.15
CDKN1B-201ENST00000228872 TNPO1Q92973 898 aaKnown RBP22.21■■□□□ 1.15
CDKN1B-201ENST00000228872 YTHDC2Q9H6S0 1430 aaKnown RBP22.21■■□□□ 1.15
CDKN1B-201ENST00000228872 MVPQ14764 893 aaKnown RBP22.2■■□□□ 1.14
CDKN1B-201ENST00000228872 RRP7AQ9Y3A4 280 aaKnown RBP22.2■■□□□ 1.14
CDKN1B-201ENST00000228872 CARD14Q9BXL6 1004 aa22.19■■□□□ 1.14
CDKN1B-201ENST00000228872 PHF23Q9BUL5 403 aaPredicted RBP22.19■■□□□ 1.14
CDKN1B-201ENST00000228872 DLC1Q96QB1 1528 aa22.18■■□□□ 1.14
CDKN1B-201ENST00000228872 IQSEC2Q5JU85 1478 aa22.18■■□□□ 1.14
CDKN1B-201ENST00000228872 WDR63Q8IWG1 891 aa22.17■■□□□ 1.14
CDKN1B-201ENST00000228872 SNX21Q969T3 373 aa22.17■■□□□ 1.14
CDKN1B-201ENST00000228872 RUNDC1Q96C34 613 aa22.17■■□□□ 1.14
CDKN1B-201ENST00000228872 GBP4Q96PP9 640 aa22.17■■□□□ 1.14
CDKN1B-201ENST00000228872 CIZ1Q9ULV3 898 aaPredicted RBP22.17■■□□□ 1.14
CDKN1B-201ENST00000228872 SLIT1O75093 1534 aa22.17■■□□□ 1.14
CDKN1B-201ENST00000228872 SKOR2Q2VWA4 1001 aaPredicted RBP22.17■■□□□ 1.14
CDKN1B-201ENST00000228872 SMC5Q8IY18 1101 aa22.17■■□□□ 1.14
CDKN1B-201ENST00000228872 KIAA1211Q6ZU35 1233 aa22.16■■□□□ 1.14
CDKN1B-201ENST00000228872 TCP11L2Q8N4U5 519 aa22.16■■□□□ 1.14
CDKN1B-201ENST00000228872 KNDC1Q76NI1 1749 aa22.16■■□□□ 1.14
CDKN1B-201ENST00000228872 ARHGAP23Q9P227 1491 aa22.15■■□□□ 1.14
CDKN1B-201ENST00000228872 RAB3GAP1Q15042 981 aa22.15■■□□□ 1.14
CDKN1B-201ENST00000228872 RBM25P49756 843 aaKnown RBP22.14■■□□□ 1.14
CDKN1B-201ENST00000228872 TULP4Q9NRJ4 1543 aa22.14■■□□□ 1.13
CDKN1B-201ENST00000228872 CCDC173Q0VFZ6 552 aa22.14■■□□□ 1.13
CDKN1B-201ENST00000228872 PPP1R9BQ96SB3 815 aa22.14■■□□□ 1.13
CDKN1B-201ENST00000228872 SHPRHQ149N8 1683 aa22.13■■□□□ 1.13
CDKN1B-201ENST00000228872 PTMSP20962 102 aa22.13■■□□□ 1.13
CDKN1B-201ENST00000228872 PUS7Q96PZ0 661 aaKnown RBP22.13■■□□□ 1.13
CDKN1B-201ENST00000228872 HDAC1Q13547 482 aaPredicted RBP22.13■■□□□ 1.13
CDKN1B-201ENST00000228872 ZKSCAN2Q63HK3 967 aa22.13■■□□□ 1.13
CDKN1B-201ENST00000228872 DZIP1LQ8IYY4 767 aaKnown RBP22.12■■□□□ 1.13
CDKN1B-201ENST00000228872 ZNF142P52746 1687 aaPredicted RBP22.11■■□□□ 1.13
CDKN1B-201ENST00000228872 PLEKHG1Q9ULL1 1385 aa22.11■■□□□ 1.13
CDKN1B-201ENST00000228872 FTSJ3Q8IY81 847 aaKnown RBP22.11■■□□□ 1.13
CDKN1B-201ENST00000228872 CEP170BQ9Y4F5 1589 aaPredicted RBP22.11■■□□□ 1.13
CDKN1B-201ENST00000228872 HSP90AB1P08238 724 aaKnown RBP22.11■■□□□ 1.13
CDKN1B-201ENST00000228872 ZSCAN30Q86W11 494 aa22.11■■□□□ 1.13
CDKN1B-201ENST00000228872 OFD1O75665 1012 aa22.1■■□□□ 1.13
CDKN1B-201ENST00000228872 ABCC11Q96J66 1382 aa22.09■■□□□ 1.13
CDKN1B-201ENST00000228872 CCDC27Q2M243 656 aa22.09■■□□□ 1.13
CDKN1B-201ENST00000228872 STK26Q9P289 416 aa22.09■■□□□ 1.13
CDKN1B-201ENST00000228872 EVC2Q86UK5 1308 aa22.08■■□□□ 1.13
CDKN1B-201ENST00000228872 SENP3Q9H4L4 574 aaPredicted RBP22.08■■□□□ 1.13
CDKN1B-201ENST00000228872 NASPP49321 788 aaPredicted RBP22.08■■□□□ 1.12
CDKN1B-201ENST00000228872 ADAMTS13Q76LX8 1427 aa22.07■■□□□ 1.12
CDKN1B-201ENST00000228872 CALD1Q05682 793 aaKnown RBP22.06■■□□□ 1.12
CDKN1B-201ENST00000228872 TECPR2O15040 1411 aa22.06■■□□□ 1.12
CDKN1B-201ENST00000228872 CPS1P31327 1500 aa22.06■■□□□ 1.12
CDKN1B-201ENST00000228872 METP08581 1390 aa22.06■■□□□ 1.12
CDKN1B-201ENST00000228872 MED14O60244 1454 aa22.05■■□□□ 1.12
CDKN1B-201ENST00000228872 RIPK4P57078 832 aa22.05■■□□□ 1.12
CDKN1B-201ENST00000228872 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.05■■□□□ 1.12
CDKN1B-201ENST00000228872 THEMISQ8N1K5 641 aaPredicted RBP22.05■■□□□ 1.12
CDKN1B-201ENST00000228872 PRAM1Q96QH2 718 aa22.05■■□□□ 1.12
CDKN1B-201ENST00000228872 SETD1BQ9UPS6 1966 aaKnown RBP22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms