RNA–Protein interactions for RNA: ENST00000225983.10

HDAC5-201, Transcript of histone deacetylase 5, humanhuman

APPRIS P3 TSL 5 BASIC

Gene HDAC5, Length 5,326 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-201ENST00000225983 CCDC73Q6ZRK6 1079 aa19.5■□□□□ 0.71
HDAC5-201ENST00000225983 RALYLQ86SE5 291 aaKnown RBP19.5■□□□□ 0.71
HDAC5-201ENST00000225983 PRPF40AO75400 957 aaKnown RBP19.5■□□□□ 0.71
HDAC5-201ENST00000225983 RRS1Q15050 365 aaKnown RBP19.5■□□□□ 0.71
HDAC5-201ENST00000225983 NOL10Q9BSC4 688 aaKnown RBP19.5■□□□□ 0.71
HDAC5-201ENST00000225983 MSH5O43196 834 aa19.49■□□□□ 0.71
HDAC5-201ENST00000225983 DNAJC2Q99543 621 aaKnown RBP19.49■□□□□ 0.71
HDAC5-201ENST00000225983 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.49■□□□□ 0.71
HDAC5-201ENST00000225983 SLFN5Q08AF3 891 aa19.49■□□□□ 0.71
HDAC5-201ENST00000225983 RABEP1Q15276 862 aa19.49■□□□□ 0.71
HDAC5-201ENST00000225983 WWC1Q8IX03 1113 aa19.49■□□□□ 0.71
HDAC5-201ENST00000225983 ANKRD30BQ9BXX2 1392 aa19.49■□□□□ 0.71
HDAC5-201ENST00000225983 AMOTL1Q8IY63 956 aa19.49■□□□□ 0.71
HDAC5-201ENST00000225983 ARHGEF11O15085 1522 aa19.49■□□□□ 0.71
HDAC5-201ENST00000225983 TNNT3P45378 269 aaPredicted RBP19.49■□□□□ 0.71
HDAC5-201ENST00000225983 ERICH2A1L162 156 aa19.48■□□□□ 0.71
HDAC5-201ENST00000225983 KDM4AO75164 1064 aa19.48■□□□□ 0.71
HDAC5-201ENST00000225983 SKAP1Q86WV1 359 aa19.48■□□□□ 0.71
HDAC5-201ENST00000225983 HDGFL1Q5TGJ6 251 aa19.48■□□□□ 0.71
HDAC5-201ENST00000225983 NSD3Q9BZ95 1437 aa19.48■□□□□ 0.71
HDAC5-201ENST00000225983 DHX16O60231 1041 aaKnown RBP19.48■□□□□ 0.71
HDAC5-201ENST00000225983 GPRASP1Q5JY77 1395 aa19.48■□□□□ 0.71
HDAC5-201ENST00000225983 PSMA5P28066 241 aa19.47■□□□□ 0.71
HDAC5-201ENST00000225983 HOMER1Q86YM7 354 aa19.47■□□□□ 0.71
HDAC5-201ENST00000225983 PLEKHO1Q53GL0 409 aaPredicted RBP19.47■□□□□ 0.71
HDAC5-201ENST00000225983 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.47■□□□□ 0.71
HDAC5-201ENST00000225983 TPM2P07951 284 aa19.46■□□□□ 0.71
HDAC5-201ENST00000225983 PCMTD1Q96MG8 357 aaPredicted RBP19.46■□□□□ 0.71
HDAC5-201ENST00000225983 RTEL1-TNFRSF6BF6WH68 1400 aa19.46■□□□□ 0.71
HDAC5-201ENST00000225983 SLC52A1Q9NWF4 448 aa19.46■□□□□ 0.71
HDAC5-201ENST00000225983 CHD1LQ86WJ1 897 aa19.46■□□□□ 0.71
HDAC5-201ENST00000225983 ANO8Q9HCE9 1232 aaPredicted RBP19.46■□□□□ 0.71
HDAC5-201ENST00000225983 PTPN23Q9H3S7 1636 aa19.46■□□□□ 0.71
HDAC5-201ENST00000225983 CT47B1P0C2W7 299 aaPredicted RBP19.46■□□□□ 0.71
HDAC5-201ENST00000225983 VSIG10Q8N0Z9 540 aa19.46■□□□□ 0.71
HDAC5-201ENST00000225983 IFT57Q9NWB7 429 aa19.46■□□□□ 0.71
HDAC5-201ENST00000225983 MAP4K4O95819 1239 aaPredicted RBP19.45■□□□□ 0.7
HDAC5-201ENST00000225983 ABCC5O15440 1437 aa19.45■□□□□ 0.7
HDAC5-201ENST00000225983 FYB1O15117 783 aa19.45■□□□□ 0.7
HDAC5-201ENST00000225983 C20orf194Q5TEA3 1177 aa19.45■□□□□ 0.7
HDAC5-201ENST00000225983 BCL11BQ9C0K0 894 aaPredicted RBP19.45■□□□□ 0.7
HDAC5-201ENST00000225983 CAMSAP2Q08AD1 1489 aa19.45■□□□□ 0.7
HDAC5-201ENST00000225983 ABCA10Q8WWZ4 1543 aa19.45■□□□□ 0.7
HDAC5-201ENST00000225983 KIAA0586Q9BVV6 1533 aa19.45■□□□□ 0.7
HDAC5-201ENST00000225983 ZNF692Q9BU19 519 aaPredicted RBP19.44■□□□□ 0.7
HDAC5-201ENST00000225983 HOOK1Q9UJC3 728 aaKnown RBP19.44■□□□□ 0.7
HDAC5-201ENST00000225983 LRRCC1Q9C099 1032 aa19.44■□□□□ 0.7
HDAC5-201ENST00000225983 CCT4P50991 539 aaKnown RBP19.43■□□□□ 0.7
HDAC5-201ENST00000225983 CEP89Q96ST8 783 aa19.43■□□□□ 0.7
HDAC5-201ENST00000225983 SAFBQ15424 915 aaKnown RBP eCLIP19.43■□□□□ 0.7
HDAC5-201ENST00000225983 IQGAP2Q13576 1575 aa19.42■□□□□ 0.7
HDAC5-201ENST00000225983 FAM177BA6PVY3 158 aa19.42■□□□□ 0.7
HDAC5-201ENST00000225983 FIBPO43427 364 aa19.42■□□□□ 0.7
HDAC5-201ENST00000225983 TMPOP42166 694 aaKnown RBP19.42■□□□□ 0.7
HDAC5-201ENST00000225983 TMEM57Q8N5G2 664 aa19.42■□□□□ 0.7
HDAC5-201ENST00000225983 SLC26A8Q96RN1 970 aa19.42■□□□□ 0.7
HDAC5-201ENST00000225983 R3HCC1Q9Y3T6 440 aaKnown RBP19.42■□□□□ 0.7
HDAC5-201ENST00000225983 THUMPD2Q9BTF0 503 aaKnown RBP19.42■□□□□ 0.7
HDAC5-201ENST00000225983 SIL1Q9H173 461 aa19.42■□□□□ 0.7
HDAC5-201ENST00000225983 ANKRD20A12PQ8NF67 263 aa19.41■□□□□ 0.7
HDAC5-201ENST00000225983 CCDC141Q6ZP82 1450 aa19.41■□□□□ 0.7
HDAC5-201ENST00000225983 RPGRIP1LQ68CZ1 1315 aa19.41■□□□□ 0.7
HDAC5-201ENST00000225983 K7ELQ4 463 aaPredicted RBP19.41■□□□□ 0.7
HDAC5-201ENST00000225983 MCM2P49736 904 aa19.41■□□□□ 0.7
HDAC5-201ENST00000225983 IL27Q8NEV9 243 aa19.41■□□□□ 0.7
HDAC5-201ENST00000225983 SDF4Q9BRK5 362 aa19.41■□□□□ 0.7
HDAC5-201ENST00000225983 CCDC39Q9UFE4 941 aa19.4■□□□□ 0.7
HDAC5-201ENST00000225983 PLB1Q6P1J6 1458 aa19.4■□□□□ 0.7
HDAC5-201ENST00000225983 SRCIN1Q9C0H9 1055 aa19.4■□□□□ 0.7
HDAC5-201ENST00000225983 FCHSD2O94868 740 aa19.4■□□□□ 0.7
HDAC5-201ENST00000225983 MBD3O95983 291 aa19.4■□□□□ 0.7
HDAC5-201ENST00000225983 TRIM34Q9BYJ4 488 aa19.4■□□□□ 0.7
HDAC5-201ENST00000225983 MAGI1Q96QZ7 1491 aaPredicted RBP19.4■□□□□ 0.7
HDAC5-201ENST00000225983 ATAD2Q6PL18 1390 aa19.4■□□□□ 0.7
HDAC5-201ENST00000225983 ZNF530Q6P9A1 599 aaPredicted RBP19.39■□□□□ 0.69
HDAC5-201ENST00000225983 IPO7O95373 1038 aaKnown RBP19.39■□□□□ 0.69
HDAC5-201ENST00000225983 CCDC47Q96A33 483 aaKnown RBP19.39■□□□□ 0.69
HDAC5-201ENST00000225983 ERC1Q8IUD2 1116 aa19.38■□□□□ 0.69
HDAC5-201ENST00000225983 TSPY26PQ9H489 355 aa19.38■□□□□ 0.69
HDAC5-201ENST00000225983 CEBPZQ03701 1054 aaKnown RBP19.38■□□□□ 0.69
HDAC5-201ENST00000225983 PROSER2Q86WR7 435 aaPredicted RBP19.38■□□□□ 0.69
HDAC5-201ENST00000225983 NFE2L2Q16236 605 aa19.37■□□□□ 0.69
HDAC5-201ENST00000225983 RBM42Q9BTD8 480 aaKnown RBP19.37■□□□□ 0.69
HDAC5-201ENST00000225983 MTMR7Q9Y216 660 aa19.37■□□□□ 0.69
HDAC5-201ENST00000225983 MIS18AQ9NYP9 233 aa19.37■□□□□ 0.69
HDAC5-201ENST00000225983 HIP1O00291 1037 aa19.37■□□□□ 0.69
HDAC5-201ENST00000225983 STK3Q13188 491 aa19.37■□□□□ 0.69
HDAC5-201ENST00000225983 MYL6BP14649 208 aa19.36■□□□□ 0.69
HDAC5-201ENST00000225983 IL1RAPL2Q9NP60 686 aa19.36■□□□□ 0.69
HDAC5-201ENST00000225983 ZNF771Q7L3S4 317 aaPredicted RBP19.36■□□□□ 0.69
HDAC5-201ENST00000225983 TRIM5Q9C035 493 aa19.36■□□□□ 0.69
HDAC5-201ENST00000225983 TATP17735 454 aaPredicted RBP19.35■□□□□ 0.69
HDAC5-201ENST00000225983 WAPLQ7Z5K2 1190 aa19.35■□□□□ 0.69
HDAC5-201ENST00000225983 RBM33Q96EV2 1170 aaKnown RBP19.35■□□□□ 0.69
HDAC5-201ENST00000225983 STRN4Q9NRL3 753 aa19.35■□□□□ 0.69
HDAC5-201ENST00000225983 ATP2B1P20020 1258 aa19.35■□□□□ 0.69
HDAC5-201ENST00000225983 SRGAP3O43295 1099 aa19.34■□□□□ 0.69
HDAC5-201ENST00000225983 DCTN1Q14203 1278 aa19.34■□□□□ 0.69
HDAC5-201ENST00000225983 NAT10Q9H0A0 1025 aaKnown RBP19.34■□□□□ 0.69
HDAC5-201ENST00000225983 CYP46A1Q9Y6A2 500 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms