RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 MINK1Q8N4C8 1332 aaPredicted RBP19.61■□□□□ 0.73
TGFB1-201ENST00000221930 A0A1W2PP64 1363 aa19.61■□□□□ 0.73
TGFB1-201ENST00000221930 PCDHB15Q9Y5E8 787 aa19.61■□□□□ 0.73
TGFB1-201ENST00000221930 TSR2Q969E8 191 aaKnown RBP19.6■□□□□ 0.73
TGFB1-201ENST00000221930 CCDC27Q2M243 656 aa19.6■□□□□ 0.73
TGFB1-201ENST00000221930 YTHDC2Q9H6S0 1430 aaKnown RBP19.59■□□□□ 0.73
TGFB1-201ENST00000221930 SEC24BO95487 1268 aa19.59■□□□□ 0.73
TGFB1-201ENST00000221930 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.58■□□□□ 0.73
TGFB1-201ENST00000221930 PRAM1Q96QH2 718 aa19.58■□□□□ 0.73
TGFB1-201ENST00000221930 RSPH6AQ9H0K4 717 aa19.58■□□□□ 0.73
TGFB1-201ENST00000221930 NFKBIBQ15653 356 aa19.58■□□□□ 0.72
TGFB1-201ENST00000221930 MYH16Q9H6N6 1097 aa19.58■□□□□ 0.72
TGFB1-201ENST00000221930 FBXO31Q5XUX0 539 aaPredicted RBP19.57■□□□□ 0.72
TGFB1-201ENST00000221930 RIMS2Q9UQ26 1411 aa19.57■□□□□ 0.72
TGFB1-201ENST00000221930 UBR1Q8IWV7 1749 aa19.57■□□□□ 0.72
TGFB1-201ENST00000221930 ANKRD26Q9UPS8 1709 aa19.57■□□□□ 0.72
TGFB1-201ENST00000221930 ZMYM3Q14202 1370 aa19.57■□□□□ 0.72
TGFB1-201ENST00000221930 NRXN3Q9Y4C0 1643 aa19.57■□□□□ 0.72
TGFB1-201ENST00000221930 POGKQ9P215 609 aa19.56■□□□□ 0.72
TGFB1-201ENST00000221930 NLRP1Q9C000 1473 aa19.56■□□□□ 0.72
TGFB1-201ENST00000221930 ATAD2Q6PL18 1390 aa19.55■□□□□ 0.72
TGFB1-201ENST00000221930 FYB1O15117 783 aa19.55■□□□□ 0.72
TGFB1-201ENST00000221930 ABCC11Q96J66 1382 aa19.55■□□□□ 0.72
TGFB1-201ENST00000221930 USP19O94966 1318 aa19.55■□□□□ 0.72
TGFB1-201ENST00000221930 MAPK8IP3Q9UPT6 1336 aa19.55■□□□□ 0.72
TGFB1-201ENST00000221930 HDGFP51858 240 aaKnown RBP19.55■□□□□ 0.72
TGFB1-201ENST00000221930 MED14O60244 1454 aa19.54■□□□□ 0.72
TGFB1-201ENST00000221930 PMFBP1Q8TBY8 1022 aa19.54■□□□□ 0.72
TGFB1-201ENST00000221930 ZMYND15Q9H091 742 aa19.53■□□□□ 0.72
TGFB1-201ENST00000221930 PLEKHF1Q96S99 279 aa19.53■□□□□ 0.72
TGFB1-201ENST00000221930 TMPOP42166 694 aaKnown RBP19.52■□□□□ 0.72
TGFB1-201ENST00000221930 SIRT1Q96EB6 747 aa19.52■□□□□ 0.72
TGFB1-201ENST00000221930 EXOSC9Q06265 439 aaKnown RBP19.52■□□□□ 0.72
TGFB1-201ENST00000221930 ESF1Q9H501 851 aaKnown RBP19.52■□□□□ 0.72
TGFB1-201ENST00000221930 TNRQ92752 1358 aa19.52■□□□□ 0.71
TGFB1-201ENST00000221930 TECPR2O15040 1411 aa19.51■□□□□ 0.71
TGFB1-201ENST00000221930 FTSJ3Q8IY81 847 aaKnown RBP19.51■□□□□ 0.71
TGFB1-201ENST00000221930 TERF2IPQ9NYB0 399 aa19.51■□□□□ 0.71
TGFB1-201ENST00000221930 TRIM35Q9UPQ4 493 aa19.51■□□□□ 0.71
TGFB1-201ENST00000221930 PDZRN3Q9UPQ7 1066 aa19.51■□□□□ 0.71
TGFB1-201ENST00000221930 FBLN1P23142 703 aa19.5■□□□□ 0.71
TGFB1-201ENST00000221930 CPS1P31327 1500 aa19.5■□□□□ 0.71
TGFB1-201ENST00000221930 MVPQ14764 893 aaKnown RBP19.5■□□□□ 0.71
TGFB1-201ENST00000221930 ZKSCAN2Q63HK3 967 aa19.5■□□□□ 0.71
TGFB1-201ENST00000221930 SMC4Q9NTJ3 1288 aa19.5■□□□□ 0.71
TGFB1-201ENST00000221930 STAG3Q9UJ98 1225 aa19.49■□□□□ 0.71
TGFB1-201ENST00000221930 CABP1Q9NZU7 370 aa19.49■□□□□ 0.71
TGFB1-201ENST00000221930 FAM135BQ49AJ0 1406 aa19.49■□□□□ 0.71
TGFB1-201ENST00000221930 DZIP1LQ8IYY4 767 aaKnown RBP19.49■□□□□ 0.71
TGFB1-201ENST00000221930 CDK19Q9BWU1 502 aa19.49■□□□□ 0.71
TGFB1-201ENST00000221930 RWDD1Q9H446 243 aaPredicted RBP19.48■□□□□ 0.71
TGFB1-201ENST00000221930 FER1L4A9Z1Z3 1794 aa19.47■□□□□ 0.71
TGFB1-201ENST00000221930 RIPK4P57078 832 aa19.47■□□□□ 0.71
TGFB1-201ENST00000221930 SSH1Q8WYL5 1049 aa19.47■□□□□ 0.71
TGFB1-201ENST00000221930 CD163L1Q9NR16 1453 aa19.47■□□□□ 0.71
TGFB1-201ENST00000221930 ADGRB2O60241 1585 aa19.47■□□□□ 0.71
TGFB1-201ENST00000221930 FRAT2O75474 233 aaPredicted RBP19.47■□□□□ 0.71
TGFB1-201ENST00000221930 AAMPQ13685 434 aa19.47■□□□□ 0.71
TGFB1-201ENST00000221930 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.47■□□□□ 0.71
TGFB1-201ENST00000221930 C3P01024 1663 aa19.46■□□□□ 0.71
TGFB1-201ENST00000221930 TRIM27P14373 513 aa19.46■□□□□ 0.71
TGFB1-201ENST00000221930 DIAPH1O60610 1272 aaKnown RBP19.45■□□□□ 0.7
TGFB1-201ENST00000221930 NCBP3Q53F19 620 aaKnown RBP19.45■□□□□ 0.7
TGFB1-201ENST00000221930 HDGFL2Q7Z4V5 671 aaPredicted RBP19.45■□□□□ 0.7
TGFB1-201ENST00000221930 COL3A1P02461 1466 aaPredicted RBP19.45■□□□□ 0.7
TGFB1-201ENST00000221930 ATP7BP35670 1465 aa19.45■□□□□ 0.7
TGFB1-201ENST00000221930 WAPLQ7Z5K2 1190 aa19.44■□□□□ 0.7
TGFB1-201ENST00000221930 KIF20BQ96Q89 1820 aa19.44■□□□□ 0.7
TGFB1-201ENST00000221930 ITPRIPQ8IWB1 547 aa19.44■□□□□ 0.7
TGFB1-201ENST00000221930 SLIT1O75093 1534 aa19.44■□□□□ 0.7
TGFB1-201ENST00000221930 VIRMAQ69YN4 1812 aaKnown RBP19.43■□□□□ 0.7
TGFB1-201ENST00000221930 GSE1Q14687 1217 aa19.43■□□□□ 0.7
TGFB1-201ENST00000221930 DIP2AQ14689 1571 aa19.43■□□□□ 0.7
TGFB1-201ENST00000221930 TMEM2Q9UHN6 1383 aa19.43■□□□□ 0.7
TGFB1-201ENST00000221930 NOB1Q9ULX3 412 aaKnown RBP19.43■□□□□ 0.7
TGFB1-201ENST00000221930 CT47B1P0C2W7 299 aaPredicted RBP19.41■□□□□ 0.7
TGFB1-201ENST00000221930 ARHGAP23Q9P227 1491 aa19.41■□□□□ 0.7
TGFB1-201ENST00000221930 ATF7IPQ6VMQ6 1270 aa19.41■□□□□ 0.7
TGFB1-201ENST00000221930 VSIG10Q8N0Z9 540 aa19.4■□□□□ 0.7
TGFB1-201ENST00000221930 SLKQ9H2G2 1235 aaPredicted RBP19.4■□□□□ 0.7
TGFB1-201ENST00000221930 PLEKHG1Q9ULL1 1385 aa19.39■□□□□ 0.7
TGFB1-201ENST00000221930 UPF2Q9HAU5 1272 aaKnown RBP19.38■□□□□ 0.69
TGFB1-201ENST00000221930 MLECQ14165 292 aa19.38■□□□□ 0.69
TGFB1-201ENST00000221930 TMEM57Q8N5G2 664 aa19.38■□□□□ 0.69
TGFB1-201ENST00000221930 HMOX1P09601 288 aa19.38■□□□□ 0.69
TGFB1-201ENST00000221930 PRKAR2BP31323 418 aa19.38■□□□□ 0.69
TGFB1-201ENST00000221930 POLKQ9UBT6 870 aa19.37■□□□□ 0.69
TGFB1-201ENST00000221930 DDX19BQ9UMR2 479 aa19.37■□□□□ 0.69
TGFB1-201ENST00000221930 PNPLA6Q8IY17 1366 aa19.37■□□□□ 0.69
TGFB1-201ENST00000221930 BECN1Q14457 450 aa19.37■□□□□ 0.69
TGFB1-201ENST00000221930 BRPF3Q9ULD4 1205 aa19.37■□□□□ 0.69
TGFB1-201ENST00000221930 TBC1D32Q96NH3 1257 aa19.36■□□□□ 0.69
TGFB1-201ENST00000221930 THUMPD2Q9BTF0 503 aaKnown RBP19.36■□□□□ 0.69
TGFB1-201ENST00000221930 IL16Q14005 1332 aa19.36■□□□□ 0.69
TGFB1-201ENST00000221930 CDC42BPGQ6DT37 1551 aa19.35■□□□□ 0.69
TGFB1-201ENST00000221930 FCHSD2O94868 740 aa19.35■□□□□ 0.69
TGFB1-201ENST00000221930 PHACTR3Q96KR7 559 aa19.35■□□□□ 0.69
TGFB1-201ENST00000221930 MON2Q7Z3U7 1717 aa19.35■□□□□ 0.69
TGFB1-201ENST00000221930 AKAP12Q02952 1782 aa19.34■□□□□ 0.69
TGFB1-201ENST00000221930 PNNQ9H307 717 aaKnown RBP19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms