RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 GGNBP2Q9H3C7 697 aa27.06■■□□□ 1.92
CCDC130-201ENST00000221554 RIMS2Q9UQ26 1411 aa27.06■■□□□ 1.92
CCDC130-201ENST00000221554 ATP7BP35670 1465 aa27.05■■□□□ 1.92
CCDC130-201ENST00000221554 PLEKHF1Q96S99 279 aa27.05■■□□□ 1.92
CCDC130-201ENST00000221554 ESF1Q9H501 851 aaKnown RBP27.05■■□□□ 1.92
CCDC130-201ENST00000221554 PNPLA6Q8IY17 1366 aa27.05■■□□□ 1.92
CCDC130-201ENST00000221554 CEBPAP49715 358 aaPredicted RBP27.04■■□□□ 1.92
CCDC130-201ENST00000221554 HDGFP51858 240 aaKnown RBP27.04■■□□□ 1.92
CCDC130-201ENST00000221554 PLPPR3Q6T4P5 718 aa27.02■■□□□ 1.92
CCDC130-201ENST00000221554 FRAT1Q92837 279 aaPredicted RBP27.02■■□□□ 1.92
CCDC130-201ENST00000221554 COG6Q9Y2V7 657 aa27.02■■□□□ 1.92
CCDC130-201ENST00000221554 ZMYM3Q14202 1370 aa27.02■■□□□ 1.92
CCDC130-201ENST00000221554 KIF20BQ96Q89 1820 aa27.02■■□□□ 1.92
CCDC130-201ENST00000221554 DIAPH1O60610 1272 aaKnown RBP27.02■■□□□ 1.92
CCDC130-201ENST00000221554 TMPOP42166 694 aaKnown RBP27.02■■□□□ 1.92
CCDC130-201ENST00000221554 U2SURPO15042 1029 aaKnown RBP27.01■■□□□ 1.91
CCDC130-201ENST00000221554 C8orf34Q49A92 452 aa27.01■■□□□ 1.91
CCDC130-201ENST00000221554 RTL5Q5HYW3 569 aaPredicted RBP27.01■■□□□ 1.91
CCDC130-201ENST00000221554 PANK1Q8TE04 598 aa27.01■■□□□ 1.91
CCDC130-201ENST00000221554 SIRT1Q96EB6 747 aa27.01■■□□□ 1.91
CCDC130-201ENST00000221554 PPM1GO15355 546 aaPredicted RBP27■■□□□ 1.91
CCDC130-201ENST00000221554 CABP1Q9NZU7 370 aa26.99■■□□□ 1.91
CCDC130-201ENST00000221554 USP35Q9P2H5 1018 aa26.99■■□□□ 1.91
CCDC130-201ENST00000221554 IGHDP01880 384 aa26.98■■□□□ 1.91
CCDC130-201ENST00000221554 SKAP1Q86WV1 359 aa26.98■■□□□ 1.91
CCDC130-201ENST00000221554 SETD1AO15047 1707 aaKnown RBP26.98■■□□□ 1.91
CCDC130-201ENST00000221554 CDC42BPGQ6DT37 1551 aa26.98■■□□□ 1.91
CCDC130-201ENST00000221554 FCHSD2O94868 740 aa26.97■■□□□ 1.91
CCDC130-201ENST00000221554 SETD1BQ9UPS6 1966 aaKnown RBP26.97■■□□□ 1.91
CCDC130-201ENST00000221554 RGS3P49796 1198 aa26.96■■□□□ 1.91
CCDC130-201ENST00000221554 ZKSCAN2Q63HK3 967 aa26.96■■□□□ 1.91
CCDC130-201ENST00000221554 NEFMP07197 916 aa26.94■■□□□ 1.9
CCDC130-201ENST00000221554 NBR1Q14596 966 aa26.94■■□□□ 1.9
CCDC130-201ENST00000221554 RWDD1Q9H446 243 aaPredicted RBP26.94■■□□□ 1.9
CCDC130-201ENST00000221554 DAXXQ9UER7 740 aaPredicted RBP26.94■■□□□ 1.9
CCDC130-201ENST00000221554 TRIM35Q9UPQ4 493 aa26.93■■□□□ 1.9
CCDC130-201ENST00000221554 FAM135BQ49AJ0 1406 aa26.92■■□□□ 1.9
CCDC130-201ENST00000221554 EDC4Q6P2E9 1401 aaKnown RBP26.91■■□□□ 1.9
CCDC130-201ENST00000221554 MVPQ14764 893 aaKnown RBP26.91■■□□□ 1.9
CCDC130-201ENST00000221554 DZIP1LQ8IYY4 767 aaKnown RBP26.9■■□□□ 1.9
CCDC130-201ENST00000221554 WASLO00401 505 aaPredicted RBP26.89■■□□□ 1.9
CCDC130-201ENST00000221554 RIPK4P57078 832 aa26.89■■□□□ 1.9
CCDC130-201ENST00000221554 ZNF428Q96B54 188 aa26.89■■□□□ 1.9
CCDC130-201ENST00000221554 KNDC1Q76NI1 1749 aa26.89■■□□□ 1.89
CCDC130-201ENST00000221554 CPSF1Q10570 1443 aaKnown RBP26.88■■□□□ 1.89
CCDC130-201ENST00000221554 FTSJ3Q8IY81 847 aaKnown RBP26.88■■□□□ 1.89
CCDC130-201ENST00000221554 TECPR2O15040 1411 aa26.88■■□□□ 1.89
CCDC130-201ENST00000221554 VIRMAQ69YN4 1812 aaKnown RBP26.87■■□□□ 1.89
CCDC130-201ENST00000221554 CALD1Q05682 793 aaKnown RBP26.87■■□□□ 1.89
CCDC130-201ENST00000221554 WAPLQ7Z5K2 1190 aa26.87■■□□□ 1.89
CCDC130-201ENST00000221554 SENP3Q9H4L4 574 aaPredicted RBP26.87■■□□□ 1.89
CCDC130-201ENST00000221554 RLBP1P12271 317 aa26.86■■□□□ 1.89
CCDC130-201ENST00000221554 EXOSC9Q06265 439 aaKnown RBP26.86■■□□□ 1.89
CCDC130-201ENST00000221554 AATKQ6ZMQ8 1374 aa26.86■■□□□ 1.89
CCDC130-201ENST00000221554 NRXN3Q9Y4C0 1643 aa26.86■■□□□ 1.89
CCDC130-201ENST00000221554 IPO8O15397 1037 aaKnown RBP26.85■■□□□ 1.89
CCDC130-201ENST00000221554 DEKP35659 375 aaKnown RBP26.85■■□□□ 1.89
CCDC130-201ENST00000221554 SMC4Q9NTJ3 1288 aa26.85■■□□□ 1.89
CCDC130-201ENST00000221554 POLKQ9UBT6 870 aa26.85■■□□□ 1.89
CCDC130-201ENST00000221554 ALDH1L2Q3SY69 923 aa26.84■■□□□ 1.89
CCDC130-201ENST00000221554 DDX19BQ9UMR2 479 aa26.84■■□□□ 1.89
CCDC130-201ENST00000221554 BCL2L13Q9BXK5 485 aa26.83■■□□□ 1.89
CCDC130-201ENST00000221554 PCDHB15Q9Y5E8 787 aa26.83■■□□□ 1.89
CCDC130-201ENST00000221554 PPIP5K1Q6PFW1 1433 aa26.83■■□□□ 1.88
CCDC130-201ENST00000221554 KIF16BQ96L93 1317 aa26.83■■□□□ 1.88
CCDC130-201ENST00000221554 TSR2Q969E8 191 aaKnown RBP26.82■■□□□ 1.88
CCDC130-201ENST00000221554 ZNF692Q9BU19 519 aaPredicted RBP26.82■■□□□ 1.88
CCDC130-201ENST00000221554 RSPH6AQ9H0K4 717 aa26.81■■□□□ 1.88
CCDC130-201ENST00000221554 ATF7IPQ6VMQ6 1270 aa26.81■■□□□ 1.88
CCDC130-201ENST00000221554 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.81■■□□□ 1.88
CCDC130-201ENST00000221554 CCDC61Q9Y6R9 512 aa26.81■■□□□ 1.88
CCDC130-201ENST00000221554 CPS1P31327 1500 aa26.8■■□□□ 1.88
CCDC130-201ENST00000221554 TNRQ92752 1358 aa26.8■■□□□ 1.88
CCDC130-201ENST00000221554 METP08581 1390 aa26.8■■□□□ 1.88
CCDC130-201ENST00000221554 BRPF1P55201 1214 aaPredicted RBP26.79■■□□□ 1.88
CCDC130-201ENST00000221554 CDK12Q9NYV4 1490 aaPredicted RBP26.79■■□□□ 1.88
CCDC130-201ENST00000221554 SSH1Q8WYL5 1049 aa26.79■■□□□ 1.88
CCDC130-201ENST00000221554 LRRC7Q96NW7 1537 aa26.78■■□□□ 1.88
CCDC130-201ENST00000221554 NUDT16Q96DE0 195 aaKnown RBP26.78■■□□□ 1.88
CCDC130-201ENST00000221554 HDAC1Q13547 482 aaPredicted RBP26.77■■□□□ 1.88
CCDC130-201ENST00000221554 NFE2L2Q16236 605 aa26.77■■□□□ 1.88
CCDC130-201ENST00000221554 CHMP4BQ9H444 224 aaKnown RBP26.77■■□□□ 1.88
CCDC130-201ENST00000221554 PRKAR2BP31323 418 aa26.76■■□□□ 1.88
CCDC130-201ENST00000221554 MAP2P11137 1827 aaKnown RBP26.76■■□□□ 1.87
CCDC130-201ENST00000221554 LMOD3Q0VAK6 560 aa26.76■■□□□ 1.87
CCDC130-201ENST00000221554 COG3Q96JB2 828 aa26.76■■□□□ 1.87
CCDC130-201ENST00000221554 PDZRN3Q9UPQ7 1066 aa26.76■■□□□ 1.87
CCDC130-201ENST00000221554 TNNQ9UQP3 1299 aa26.76■■□□□ 1.87
CCDC130-201ENST00000221554 TRIM27P14373 513 aa26.75■■□□□ 1.87
CCDC130-201ENST00000221554 MON2Q7Z3U7 1717 aa26.75■■□□□ 1.87
CCDC130-201ENST00000221554 UPF2Q9HAU5 1272 aaKnown RBP26.74■■□□□ 1.87
CCDC130-201ENST00000221554 TMEM2Q9UHN6 1383 aa26.74■■□□□ 1.87
CCDC130-201ENST00000221554 TXNDC2Q86VQ3 553 aa26.74■■□□□ 1.87
CCDC130-201ENST00000221554 IL13P35225 146 aa26.73■■□□□ 1.87
CCDC130-201ENST00000221554 LAS1LQ9Y4W2 734 aaKnown RBP26.73■■□□□ 1.87
CCDC130-201ENST00000221554 NOB1Q9ULX3 412 aaKnown RBP26.72■■□□□ 1.87
CCDC130-201ENST00000221554 ZNF142P52746 1687 aaPredicted RBP26.72■■□□□ 1.87
CCDC130-201ENST00000221554 GNAI1P63096 354 aa26.71■■□□□ 1.87
CCDC130-201ENST00000221554 AKAP12Q02952 1782 aa26.71■■□□□ 1.87
CCDC130-201ENST00000221554 IFT57Q9NWB7 429 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms