RNA–Protein interactions for RNA: ENST00000214869.6

TMED1-201, Transcript of transmembrane p24 trafficking protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED1, Length 1,340 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-201ENST00000214869 CNGB1Q14028 1251 aaPredicted RBP21.29■■□□□ 1
TMED1-201ENST00000214869 CCDC184Q52MB2 194 aa21.29■■□□□ 1
TMED1-201ENST00000214869 USP54Q70EL1 1684 aa21.29■■□□□ 1
TMED1-201ENST00000214869 TTC21BQ7Z4L5 1316 aa21.29■■□□□ 1
TMED1-201ENST00000214869 MORC1Q86VD1 984 aa21.29■■□□□ 1
TMED1-201ENST00000214869 NGDNQ8NEJ9 315 aaKnown RBP21.29■■□□□ 1
TMED1-201ENST00000214869 MRS2Q9HD23 443 aa21.29■■□□□ 1
TMED1-201ENST00000214869 TTC21AQ8NDW8 1320 aa21.28■■□□□ 1
TMED1-201ENST00000214869 PMFBP1Q8TBY8 1022 aa21.28■■□□□ 1
TMED1-201ENST00000214869 SCAF1Q9H7N4 1312 aaKnown RBP21.26■□□□□ 0.99
TMED1-201ENST00000214869 ESCO1Q5FWF5 840 aa21.25■□□□□ 0.99
TMED1-201ENST00000214869 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.25■□□□□ 0.99
TMED1-201ENST00000214869 GGNBP2Q9H3C7 697 aa21.24■□□□□ 0.99
TMED1-201ENST00000214869 PIK3C2AO00443 1686 aa21.23■□□□□ 0.99
TMED1-201ENST00000214869 ORAI2Q96SN7 254 aa21.23■□□□□ 0.99
TMED1-201ENST00000214869 USP31Q70CQ4 1352 aa21.23■□□□□ 0.99
TMED1-201ENST00000214869 TRPM3Q9HCF6 1732 aaPredicted RBP21.22■□□□□ 0.99
TMED1-201ENST00000214869 OVOS2A0A0J9YW53 1432 aa21.22■□□□□ 0.99
TMED1-201ENST00000214869 OVOS2Q6IE36 1432 aa21.22■□□□□ 0.99
TMED1-201ENST00000214869 NME9Q86XW9 330 aa21.22■□□□□ 0.99
TMED1-201ENST00000214869 PNISRQ8TF01 805 aaKnown RBP21.22■□□□□ 0.99
TMED1-201ENST00000214869 MARF1Q9Y4F3 1742 aaKnown RBP21.21■□□□□ 0.99
TMED1-201ENST00000214869 MAP2P11137 1827 aaKnown RBP21.2■□□□□ 0.98
TMED1-201ENST00000214869 AATKQ6ZMQ8 1374 aa21.19■□□□□ 0.98
TMED1-201ENST00000214869 COG3Q96JB2 828 aa21.18■□□□□ 0.98
TMED1-201ENST00000214869 INSRP06213 1382 aa21.17■□□□□ 0.98
TMED1-201ENST00000214869 SMG6Q86US8 1419 aaKnown RBP21.16■□□□□ 0.98
TMED1-201ENST00000214869 PSME1Q06323 249 aa21.16■□□□□ 0.98
TMED1-201ENST00000214869 SLAIN2Q9P270 581 aa21.16■□□□□ 0.98
TMED1-201ENST00000214869 ZRANB1Q9UGI0 708 aa21.15■□□□□ 0.98
TMED1-201ENST00000214869 ALS2Q96Q42 1657 aa21.15■□□□□ 0.98
TMED1-201ENST00000214869 FOXO3O43524 673 aa21.14■□□□□ 0.97
TMED1-201ENST00000214869 MTHFSP49914 203 aa21.13■□□□□ 0.97
TMED1-201ENST00000214869 IQSEC2Q5JU85 1478 aa21.13■□□□□ 0.97
TMED1-201ENST00000214869 SHPRHQ149N8 1683 aa21.12■□□□□ 0.97
TMED1-201ENST00000214869 TNNT2P45379 298 aaPredicted RBP21.12■□□□□ 0.97
TMED1-201ENST00000214869 KRT28Q7Z3Y7 464 aa21.12■□□□□ 0.97
TMED1-201ENST00000214869 NPHP3Q7Z494 1330 aa21.12■□□□□ 0.97
TMED1-201ENST00000214869 SBNO1A3KN83 1393 aa21.12■□□□□ 0.97
TMED1-201ENST00000214869 PNPLA6Q8IY17 1366 aa21.12■□□□□ 0.97
TMED1-201ENST00000214869 PXDNQ92626 1479 aa21.12■□□□□ 0.97
TMED1-201ENST00000214869 BRINP3Q76B58 766 aa21.11■□□□□ 0.97
TMED1-201ENST00000214869 COL3A1P02461 1466 aaPredicted RBP21.11■□□□□ 0.97
TMED1-201ENST00000214869 NHSL1Q5SYE7 1610 aa21.11■□□□□ 0.97
TMED1-201ENST00000214869 CDK12Q9NYV4 1490 aaPredicted RBP21.09■□□□□ 0.97
TMED1-201ENST00000214869 FAM9BQ8IZU0 186 aa21.09■□□□□ 0.97
TMED1-201ENST00000214869 CFAP53Q96M91 514 aa21.09■□□□□ 0.97
TMED1-201ENST00000214869 POLKQ9UBT6 870 aa21.09■□□□□ 0.97
TMED1-201ENST00000214869 ABTB2Q8N961 1025 aa21.08■□□□□ 0.97
TMED1-201ENST00000214869 NLRP6P59044 892 aa21.07■□□□□ 0.96
TMED1-201ENST00000214869 SLIT3O75094 1523 aa21.07■□□□□ 0.96
TMED1-201ENST00000214869 PAK3O75914 559 aaPredicted RBP21.06■□□□□ 0.96
TMED1-201ENST00000214869 YTHDC1Q96MU7 727 aaKnown RBP21.06■□□□□ 0.96
TMED1-201ENST00000214869 BLMP54132 1417 aaPredicted RBP21.05■□□□□ 0.96
TMED1-201ENST00000214869 SOS2Q07890 1332 aaPredicted RBP21.05■□□□□ 0.96
TMED1-201ENST00000214869 NFAT5O94916 1531 aa21.05■□□□□ 0.96
TMED1-201ENST00000214869 PHRF1Q9P1Y6 1649 aaKnown RBP21.04■□□□□ 0.96
TMED1-201ENST00000214869 KIF24Q5T7B8 1368 aa21.04■□□□□ 0.96
TMED1-201ENST00000214869 PEAK1Q9H792 1746 aa21.04■□□□□ 0.96
TMED1-201ENST00000214869 USP19O94966 1318 aa21.04■□□□□ 0.96
TMED1-201ENST00000214869 TNS3Q68CZ2 1445 aa21.03■□□□□ 0.96
TMED1-201ENST00000214869 XPCQ01831 940 aaPredicted RBP21.03■□□□□ 0.96
TMED1-201ENST00000214869 WDR43Q15061 677 aaKnown RBP eCLIP21.03■□□□□ 0.96
TMED1-201ENST00000214869 MED1Q15648 1581 aaPredicted RBP21.02■□□□□ 0.96
TMED1-201ENST00000214869 CRYBG1Q9Y4K1 1723 aa21.02■□□□□ 0.96
TMED1-201ENST00000214869 ROBO1Q9Y6N7 1651 aa21.02■□□□□ 0.96
TMED1-201ENST00000214869 FBLN1P23142 703 aa21.02■□□□□ 0.95
TMED1-201ENST00000214869 ADAMTS8Q9UP79 889 aa21.02■□□□□ 0.95
TMED1-201ENST00000214869 LTN1O94822 1766 aa21.01■□□□□ 0.95
TMED1-201ENST00000214869 AHDC1Q5TGY3 1603 aaPredicted RBP21.01■□□□□ 0.95
TMED1-201ENST00000214869 SPATA31A3Q5VYP0 1347 aa21.01■□□□□ 0.95
TMED1-201ENST00000214869 EMILIN1Q9Y6C2 1016 aa21.01■□□□□ 0.95
TMED1-201ENST00000214869 ARHGEF10O15013 1369 aa21■□□□□ 0.95
TMED1-201ENST00000214869 KCNH5Q8NCM2 988 aa21■□□□□ 0.95
TMED1-201ENST00000214869 DDX17Q92841 729 aaKnown RBP21■□□□□ 0.95
TMED1-201ENST00000214869 UBAP1LF5GYI3 381 aa20.99■□□□□ 0.95
TMED1-201ENST00000214869 RRS1Q15050 365 aaKnown RBP20.99■□□□□ 0.95
TMED1-201ENST00000214869 MAP3K19Q56UN5 1328 aa20.98■□□□□ 0.95
TMED1-201ENST00000214869 DIAPH1O60610 1272 aaKnown RBP20.98■□□□□ 0.95
TMED1-201ENST00000214869 NUTM2GQ5VZR2 741 aa20.98■□□□□ 0.95
TMED1-201ENST00000214869 NUDCQ9Y266 331 aa20.98■□□□□ 0.95
TMED1-201ENST00000214869 RTL1A6NKG5 1358 aa20.97■□□□□ 0.95
TMED1-201ENST00000214869 HNRNPUQ00839 825 aaKnown RBP eCLIP20.97■□□□□ 0.95
TMED1-201ENST00000214869 FLT4P35916 1363 aa20.96■□□□□ 0.95
TMED1-201ENST00000214869 RGPD1P0DJD0 1748 aa20.95■□□□□ 0.94
TMED1-201ENST00000214869 GCP02774 474 aa20.94■□□□□ 0.94
TMED1-201ENST00000214869 IL13P35225 146 aa20.94■□□□□ 0.94
TMED1-201ENST00000214869 ZBED9Q6R2W3 1325 aa20.94■□□□□ 0.94
TMED1-201ENST00000214869 PPM1GO15355 546 aaPredicted RBP20.93■□□□□ 0.94
TMED1-201ENST00000214869 TOM1O60784 492 aa20.93■□□□□ 0.94
TMED1-201ENST00000214869 CENPBP07199 599 aaPredicted RBP20.93■□□□□ 0.94
TMED1-201ENST00000214869 ABCA3Q99758 1704 aa20.92■□□□□ 0.94
TMED1-201ENST00000214869 ABCC6O95255 1503 aa20.92■□□□□ 0.94
TMED1-201ENST00000214869 LMOD2Q6P5Q4 547 aa20.91■□□□□ 0.94
TMED1-201ENST00000214869 ARHGEF25Q86VW2 580 aa20.91■□□□□ 0.94
TMED1-201ENST00000214869 COL22A1Q8NFW1 1626 aaPredicted RBP20.89■□□□□ 0.93
TMED1-201ENST00000214869 SOX12O15370 315 aa20.89■□□□□ 0.93
TMED1-201ENST00000214869 HOXC9P31274 260 aa20.89■□□□□ 0.93
TMED1-201ENST00000214869 AMPHP49418 695 aa20.89■□□□□ 0.93
TMED1-201ENST00000214869 HSP90AB2PQ58FF8 381 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms