RNA–Protein interactions for RNA: ENSMUST00000225319.1

Ssr1-204, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-204ENSMUST00000225319 Tmem94Q7TSH8 1360 aa18.89■□□□□ 0.62
Ssr1-204ENSMUST00000225319 Astn2Q80Z10 1352 aa18.89■□□□□ 0.62
Ssr1-204ENSMUST00000225319 Esx1O88933 382 aa18.89■□□□□ 0.62
Ssr1-204ENSMUST00000225319 Gm10563F6WIE4 79 aa18.89■□□□□ 0.61
Ssr1-204ENSMUST00000225319 Kif16bB1AVY7 1312 aa18.88■□□□□ 0.61
Ssr1-204ENSMUST00000225319 Hoxb7P09024 217 aa18.88■□□□□ 0.61
Ssr1-204ENSMUST00000225319 Znf316Q6PGE4 1016 aa18.88■□□□□ 0.61
Ssr1-204ENSMUST00000225319 Pik3c2aQ61194 1686 aa18.87■□□□□ 0.61
Ssr1-204ENSMUST00000225319 Kank1E9Q238 1360 aa18.87■□□□□ 0.61
Ssr1-204ENSMUST00000225319 GsdmaQ9EST1 446 aa18.87■□□□□ 0.61
Ssr1-204ENSMUST00000225319 Col18a1P39061 1774 aa18.86■□□□□ 0.61
Ssr1-204ENSMUST00000225319 Fam135bQ9DAI6 1403 aa18.86■□□□□ 0.61
Ssr1-204ENSMUST00000225319 Map4k4P97820 1233 aaKnown RBP18.86■□□□□ 0.61
Ssr1-204ENSMUST00000225319 Zfp444Q3TDV8 331 aaKnown RBP18.86■□□□□ 0.61
Ssr1-204ENSMUST00000225319 Supt16hQ920B9 1047 aa18.86■□□□□ 0.61
Ssr1-204ENSMUST00000225319 Sipa1l2Q80TE4 1722 aa18.86■□□□□ 0.61
Ssr1-204ENSMUST00000225319 Col16a1Q8BLX7 1580 aa18.86■□□□□ 0.61
Ssr1-204ENSMUST00000225319 Idi1P58044 227 aa18.85■□□□□ 0.61
Ssr1-204ENSMUST00000225319 Trim28Q62318 834 aa18.85■□□□□ 0.61
Ssr1-204ENSMUST00000225319 CemipQ8BI06 1361 aa18.85■□□□□ 0.61
Ssr1-204ENSMUST00000225319 L3mbtl2P59178 703 aa18.85■□□□□ 0.61
Ssr1-204ENSMUST00000225319 Znf541Q0GGX2 1363 aa18.84■□□□□ 0.61
Ssr1-204ENSMUST00000225319 Ltbp4Q8K4G1 1666 aa18.84■□□□□ 0.61
Ssr1-204ENSMUST00000225319 Camta1A2A891 1682 aa18.83■□□□□ 0.61
Ssr1-204ENSMUST00000225319 Scn7aB1AYL1 1681 aa18.83■□□□□ 0.61
Ssr1-204ENSMUST00000225319 Upf2A2AT37 1269 aaKnown RBP18.83■□□□□ 0.61
Ssr1-204ENSMUST00000225319 Cdk12Q14AX6 1484 aaKnown RBP18.83■□□□□ 0.6
Ssr1-204ENSMUST00000225319 Ubr1O70481 1757 aa18.82■□□□□ 0.6
Ssr1-204ENSMUST00000225319 Wnk3Q80XP9 1757 aa18.82■□□□□ 0.6
Ssr1-204ENSMUST00000225319 Tmem2Q5FWI3 1383 aa18.81■□□□□ 0.6
Ssr1-204ENSMUST00000225319 Ncbp3Q8BZR9 615 aaKnown RBP18.81■□□□□ 0.6
Ssr1-204ENSMUST00000225319 Golga2Q921M4 999 aa18.81■□□□□ 0.6
Ssr1-204ENSMUST00000225319 Uspl1Q3ULM6 1089 aa18.8■□□□□ 0.6
Ssr1-204ENSMUST00000225319 Ttc41Q692V3 1318 aa18.79■□□□□ 0.6
Ssr1-204ENSMUST00000225319 Scaf1Q5U4C3 1256 aaKnown RBP18.79■□□□□ 0.6
Ssr1-204ENSMUST00000225319 Rapgef3Q8VCC8 918 aa18.78■□□□□ 0.6
Ssr1-204ENSMUST00000225319 Ap3b2Q9JME5 1082 aa18.78■□□□□ 0.6
Ssr1-204ENSMUST00000225319 Map2P20357 1828 aa18.77■□□□□ 0.6
Ssr1-204ENSMUST00000225319 Ppp1r15aP17564 657 aa18.77■□□□□ 0.6
Ssr1-204ENSMUST00000225319 Tsen2Q6P7W5 460 aa18.77■□□□□ 0.6
Ssr1-204ENSMUST00000225319 Spef2Q8C9J3 1734 aa18.75■□□□□ 0.59
Ssr1-204ENSMUST00000225319 CrbnQ8C7D2 445 aa18.74■□□□□ 0.59
Ssr1-204ENSMUST00000225319 Ralbp1Q62172 648 aa18.74■□□□□ 0.59
Ssr1-204ENSMUST00000225319 Slain2Q8CI08 581 aa18.73■□□□□ 0.59
Ssr1-204ENSMUST00000225319 U2af1Q9D883 239 aaKnown RBP18.73■□□□□ 0.59
Ssr1-204ENSMUST00000225319 Sox12Q04890 314 aa18.72■□□□□ 0.59
Ssr1-204ENSMUST00000225319 Frmpd2A0A140LI67 1392 aa18.72■□□□□ 0.59
Ssr1-204ENSMUST00000225319 Erbb3Q61526 1339 aa18.72■□□□□ 0.59
Ssr1-204ENSMUST00000225319 Birc3O08863 600 aa18.71■□□□□ 0.59
Ssr1-204ENSMUST00000225319 Uhrf1bp1lA2RSJ4 1457 aa18.71■□□□□ 0.59
Ssr1-204ENSMUST00000225319 Fchsd2Q3USJ8 740 aa18.71■□□□□ 0.58
Ssr1-204ENSMUST00000225319 NgefQ8CHT1 710 aa18.71■□□□□ 0.58
Ssr1-204ENSMUST00000225319 Slc12a5Q91V14 1138 aa18.71■□□□□ 0.58
Ssr1-204ENSMUST00000225319 Rad21Q61550 635 aaKnown RBP18.7■□□□□ 0.58
Ssr1-204ENSMUST00000225319 Uhrf1bp1B2KF50 1429 aa18.69■□□□□ 0.58
Ssr1-204ENSMUST00000225319 Rad17Q6NXW6 688 aa18.69■□□□□ 0.58
Ssr1-204ENSMUST00000225319 Liat1Q810M6 228 aa18.69■□□□□ 0.58
Ssr1-204ENSMUST00000225319 Ciz1Q8VEH2 845 aa18.69■□□□□ 0.58
Ssr1-204ENSMUST00000225319 Speer4f1Q9D5Q6 258 aa18.68■□□□□ 0.58
Ssr1-204ENSMUST00000225319 PtprvP70289 1705 aa18.68■□□□□ 0.58
Ssr1-204ENSMUST00000225319 Rsph6aQ8CDR2 708 aa18.67■□□□□ 0.58
Ssr1-204ENSMUST00000225319 Tcerg1Q8CGF7 1100 aaKnown RBP18.67■□□□□ 0.58
Ssr1-204ENSMUST00000225319 Robo1O89026 1612 aa18.66■□□□□ 0.58
Ssr1-204ENSMUST00000225319 Dennd6aQ8BH65 605 aa18.66■□□□□ 0.58
Ssr1-204ENSMUST00000225319 Ccdc30Q8BVF4 654 aa18.66■□□□□ 0.58
Ssr1-204ENSMUST00000225319 Nlgn1Q99K10 843 aa18.66■□□□□ 0.58
Ssr1-204ENSMUST00000225319 TnikP83510 1323 aa18.66■□□□□ 0.58
Ssr1-204ENSMUST00000225319 Plekhh1Q80TI1 1356 aa18.65■□□□□ 0.58
Ssr1-204ENSMUST00000225319 Kcna6Q61923 529 aa18.65■□□□□ 0.58
Ssr1-204ENSMUST00000225319 Wdr17E9Q271 1322 aa18.65■□□□□ 0.58
Ssr1-204ENSMUST00000225319 Ano8Q6PB70 1060 aa18.64■□□□□ 0.57
Ssr1-204ENSMUST00000225319 PaskQ8CEE6 1383 aa18.64■□□□□ 0.57
Ssr1-204ENSMUST00000225319 Ncapd2Q8K2Z4 1392 aa18.64■□□□□ 0.57
Ssr1-204ENSMUST00000225319 FancaQ9JL70 1439 aa18.64■□□□□ 0.57
Ssr1-204ENSMUST00000225319 Ncoa4Q5U4H9 625 aa18.63■□□□□ 0.57
Ssr1-204ENSMUST00000225319 PalmQ9Z0P4 383 aa18.63■□□□□ 0.57
Ssr1-204ENSMUST00000225319 Siglec1Q62230 1695 aa18.63■□□□□ 0.57
Ssr1-204ENSMUST00000225319 Apaf1O88879 1249 aa18.63■□□□□ 0.57
Ssr1-204ENSMUST00000225319 Slc35g1Q8BY79 368 aa18.63■□□□□ 0.57
Ssr1-204ENSMUST00000225319 Prkrip1Q9CWV6 186 aaKnown RBP18.63■□□□□ 0.57
Ssr1-204ENSMUST00000225319 Nfat5Q9WV30 1534 aa18.62■□□□□ 0.57
Ssr1-204ENSMUST00000225319 Gli3Q61602 1583 aa18.62■□□□□ 0.57
Ssr1-204ENSMUST00000225319 NeflP08551 543 aa18.62■□□□□ 0.57
Ssr1-204ENSMUST00000225319 Slit2Q9R1B9 1521 aa18.62■□□□□ 0.57
Ssr1-204ENSMUST00000225319 Cavin4A2AMM0 362 aa18.61■□□□□ 0.57
Ssr1-204ENSMUST00000225319 Evi5lH3BKQ3 813 aa18.61■□□□□ 0.57
Ssr1-204ENSMUST00000225319 Q4VA45 678 aa18.61■□□□□ 0.57
Ssr1-204ENSMUST00000225319 Mapk8ip3Q9ESN9 1337 aa18.61■□□□□ 0.57
Ssr1-204ENSMUST00000225319 DccP70211 1447 aa18.61■□□□□ 0.57
Ssr1-204ENSMUST00000225319 Ptpn23Q6PB44 1692 aa18.6■□□□□ 0.57
Ssr1-204ENSMUST00000225319 Atp7bQ64446 1462 aa18.6■□□□□ 0.57
Ssr1-204ENSMUST00000225319 Zfp777B9EKF4 885 aa18.6■□□□□ 0.57
Ssr1-204ENSMUST00000225319 Gimap6Q8K349 305 aa18.6■□□□□ 0.57
Ssr1-204ENSMUST00000225319 Eif4a2P10630 407 aa18.6■□□□□ 0.57
Ssr1-204ENSMUST00000225319 TimelessQ9R1X4 1197 aa18.6■□□□□ 0.57
Ssr1-204ENSMUST00000225319 Mbd3Q9Z2D8 285 aaKnown RBP18.6■□□□□ 0.57
Ssr1-204ENSMUST00000225319 Gm21190A0A0G2JGJ6 266 aa18.59■□□□□ 0.57
Ssr1-204ENSMUST00000225319 Pip4k2bQ80XI4 416 aa18.59■□□□□ 0.57
Ssr1-204ENSMUST00000225319 Fyb1O35601 819 aa18.57■□□□□ 0.56
Ssr1-204ENSMUST00000225319 Kcnh8P59111 1102 aa18.57■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms