RNA–Protein interactions for RNA: ENSMUST00000225246.1

Ssr1-203, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,825 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-203ENSMUST00000225246 U2af1Q9D883 239 aaKnown RBP16.63■□□□□ 0.25
Ssr1-203ENSMUST00000225246 Ttc21aQ8C0S4 1314 aa16.63■□□□□ 0.25
Ssr1-203ENSMUST00000225246 PaskQ8CEE6 1383 aa16.62■□□□□ 0.25
Ssr1-203ENSMUST00000225246 CastP51125 788 aa16.62■□□□□ 0.25
Ssr1-203ENSMUST00000225246 Dusp27Q148W8 1138 aa16.62■□□□□ 0.25
Ssr1-203ENSMUST00000225246 Map7O88735 730 aa16.61■□□□□ 0.25
Ssr1-203ENSMUST00000225246 Pdcl3Q8BVF2 240 aa16.61■□□□□ 0.25
Ssr1-203ENSMUST00000225246 Usp32F8VPZ3 1604 aa16.61■□□□□ 0.25
Ssr1-203ENSMUST00000225246 Kif2cQ922S8 721 aa16.6■□□□□ 0.25
Ssr1-203ENSMUST00000225246 Ccdc171E9Q1U1 1324 aa16.6■□□□□ 0.25
Ssr1-203ENSMUST00000225246 Phf14Q9D4H9 881 aa16.59■□□□□ 0.25
Ssr1-203ENSMUST00000225246 Adamts7Q68SA9 1657 aa16.59■□□□□ 0.25
Ssr1-203ENSMUST00000225246 CltcQ68FD5 1675 aaKnown RBP16.59■□□□□ 0.25
Ssr1-203ENSMUST00000225246 AU015836B2RUM3 263 aa16.59■□□□□ 0.25
Ssr1-203ENSMUST00000225246 Kif20aP97329 887 aa16.59■□□□□ 0.25
Ssr1-203ENSMUST00000225246 Amer1Q7TS75 1132 aa16.59■□□□□ 0.25
Ssr1-203ENSMUST00000225246 Armcx1Q9CX83 456 aa16.59■□□□□ 0.25
Ssr1-203ENSMUST00000225246 FanciQ8K368 1330 aa16.58■□□□□ 0.25
Ssr1-203ENSMUST00000225246 Ankrd50F7BE84 1390 aa16.58■□□□□ 0.25
Ssr1-203ENSMUST00000225246 Cavin4A2AMM0 362 aa16.58■□□□□ 0.24
Ssr1-203ENSMUST00000225246 Pnmal2G3X9N3 661 aa16.58■□□□□ 0.24
Ssr1-203ENSMUST00000225246 Polr3glQ8R0C0 218 aa16.58■□□□□ 0.24
Ssr1-203ENSMUST00000225246 Kcnn1Q9EQR3 537 aa16.58■□□□□ 0.24
Ssr1-203ENSMUST00000225246 Arhgap23Q69ZH9 1483 aa16.58■□□□□ 0.24
Ssr1-203ENSMUST00000225246 Prdm10Q3UTQ7 1184 aa16.57■□□□□ 0.24
Ssr1-203ENSMUST00000225246 Ppp1r3fQ9JIG4 799 aa16.57■□□□□ 0.24
Ssr1-203ENSMUST00000225246 AdgbG3UZ78 1657 aa16.57■□□□□ 0.24
Ssr1-203ENSMUST00000225246 Pik3r4Q8VD65 1358 aa16.56■□□□□ 0.24
Ssr1-203ENSMUST00000225246 Terf2O35144 541 aa16.56■□□□□ 0.24
Ssr1-203ENSMUST00000225246 Ncapd2Q8K2Z4 1392 aa16.56■□□□□ 0.24
Ssr1-203ENSMUST00000225246 Rbm25B2RY56 838 aaKnown RBP16.56■□□□□ 0.24
Ssr1-203ENSMUST00000225246 AU019823E9PUQ3 292 aa16.56■□□□□ 0.24
Ssr1-203ENSMUST00000225246 Catsper2A2ARP9 588 aa16.55■□□□□ 0.24
Ssr1-203ENSMUST00000225246 Atp7bQ64446 1462 aa16.55■□□□□ 0.24
Ssr1-203ENSMUST00000225246 Fchsd2Q3USJ8 740 aa16.54■□□□□ 0.24
Ssr1-203ENSMUST00000225246 Wwc1Q5SXA9 1104 aa16.54■□□□□ 0.24
Ssr1-203ENSMUST00000225246 SkilQ60665 675 aa16.54■□□□□ 0.24
Ssr1-203ENSMUST00000225246 Knl1Q66JQ7 1612 aa16.54■□□□□ 0.24
Ssr1-203ENSMUST00000225246 Kif18aQ91WD7 886 aa16.54■□□□□ 0.24
Ssr1-203ENSMUST00000225246 Gtf2a1Q99PM3 378 aa16.54■□□□□ 0.24
Ssr1-203ENSMUST00000225246 Naip7Q9JIB3 1402 aa16.53■□□□□ 0.24
Ssr1-203ENSMUST00000225246 Brd1E9PZ26 1189 aaKnown RBP16.53■□□□□ 0.24
Ssr1-203ENSMUST00000225246 Mcm4P49717 862 aa16.53■□□□□ 0.24
Ssr1-203ENSMUST00000225246 Maco1Q7TQE6 664 aaKnown RBP16.53■□□□□ 0.24
Ssr1-203ENSMUST00000225246 Mfap1aC0HKD8 439 aaKnown RBP16.52■□□□□ 0.24
Ssr1-203ENSMUST00000225246 Mfap1bC0HKD9 439 aaKnown RBP16.52■□□□□ 0.24
Ssr1-203ENSMUST00000225246 Gm10093D3YYI8 482 aa16.52■□□□□ 0.24
Ssr1-203ENSMUST00000225246 Hdac1O09106 482 aaKnown RBP16.52■□□□□ 0.24
Ssr1-203ENSMUST00000225246 Arid3cA6PWV5 409 aa16.52■□□□□ 0.23
Ssr1-203ENSMUST00000225246 Isy1Q69ZQ2 285 aaKnown RBP16.52■□□□□ 0.23
Ssr1-203ENSMUST00000225246 Trim26Q99PN3 545 aa16.52■□□□□ 0.23
Ssr1-203ENSMUST00000225246 Cluap1Q8R3P7 413 aa16.51■□□□□ 0.23
Ssr1-203ENSMUST00000225246 Exosc9Q9JHI7 438 aaKnown RBP16.51■□□□□ 0.23
Ssr1-203ENSMUST00000225246 KnstrnQ9D9Z1 312 aaKnown RBP16.5■□□□□ 0.23
Ssr1-203ENSMUST00000225246 Ptch1Q61115 1434 aa16.5■□□□□ 0.23
Ssr1-203ENSMUST00000225246 G3bp1P97855 465 aaKnown RBP16.49■□□□□ 0.23
Ssr1-203ENSMUST00000225246 RereQ80TZ9 1558 aa16.49■□□□□ 0.23
Ssr1-203ENSMUST00000225246 Ccdc60Q8C4J0 545 aa16.49■□□□□ 0.23
Ssr1-203ENSMUST00000225246 Dnttip2Q8R2M2 758 aaKnown RBP16.49■□□□□ 0.23
Ssr1-203ENSMUST00000225246 Q4VA45 678 aa16.48■□□□□ 0.23
Ssr1-203ENSMUST00000225246 Trim28Q62318 834 aa16.48■□□□□ 0.23
Ssr1-203ENSMUST00000225246 Ssh1Q76I79 1042 aa16.48■□□□□ 0.23
Ssr1-203ENSMUST00000225246 Cetn4Q8K4K1 168 aa16.48■□□□□ 0.23
Ssr1-203ENSMUST00000225246 Chmp4bQ9D8B3 224 aaKnown RBP16.48■□□□□ 0.23
Ssr1-203ENSMUST00000225246 Dip2cE9PWR4 1557 aa16.48■□□□□ 0.23
Ssr1-203ENSMUST00000225246 Alpk3Q924C5 1678 aa16.48■□□□□ 0.23
Ssr1-203ENSMUST00000225246 Swt1Q9DBQ9 907 aa16.47■□□□□ 0.23
Ssr1-203ENSMUST00000225246 NktrP30415 1453 aa16.47■□□□□ 0.23
Ssr1-203ENSMUST00000225246 ArxO35085 564 aa16.47■□□□□ 0.23
Ssr1-203ENSMUST00000225246 Ddit3P35639 168 aa16.46■□□□□ 0.23
Ssr1-203ENSMUST00000225246 LifrP42703 1092 aa16.46■□□□□ 0.23
Ssr1-203ENSMUST00000225246 Aldh1l1Q8R0Y6 902 aa16.46■□□□□ 0.23
Ssr1-203ENSMUST00000225246 Cog6Q8R3I3 657 aa16.46■□□□□ 0.23
Ssr1-203ENSMUST00000225246 Prrc2bQ7TPM1 1486 aaKnown RBP16.46■□□□□ 0.22
Ssr1-203ENSMUST00000225246 Arhgef28P97433 1693 aa16.45■□□□□ 0.22
Ssr1-203ENSMUST00000225246 Gsto1O09131 240 aa16.45■□□□□ 0.22
Ssr1-203ENSMUST00000225246 Kdm4cQ8VCD7 1054 aa16.45■□□□□ 0.22
Ssr1-203ENSMUST00000225246 Plekhg1F6S200 1446 aa16.45■□□□□ 0.22
Ssr1-203ENSMUST00000225246 PtprmP28828 1452 aa16.45■□□□□ 0.22
Ssr1-203ENSMUST00000225246 Plppr3Q7TPB0 716 aa16.45■□□□□ 0.22
Ssr1-203ENSMUST00000225246 MvpQ9EQK5 861 aa16.44■□□□□ 0.22
Ssr1-203ENSMUST00000225246 NinlQ6ZQ12 1394 aa16.44■□□□□ 0.22
Ssr1-203ENSMUST00000225246 Cep170bQ80U49 1574 aa16.44■□□□□ 0.22
Ssr1-203ENSMUST00000225246 Qser1A2BIE1 1698 aa16.43■□□□□ 0.22
Ssr1-203ENSMUST00000225246 Rrp9Q91WM3 475 aaKnown RBP16.43■□□□□ 0.22
Ssr1-203ENSMUST00000225246 Ahdc1Q6PAL7 1594 aaKnown RBP16.43■□□□□ 0.22
Ssr1-203ENSMUST00000225246 Rsph3aQ3UFY4 516 aa16.42■□□□□ 0.22
Ssr1-203ENSMUST00000225246 Q3UPC7 1272 aa16.42■□□□□ 0.22
Ssr1-203ENSMUST00000225246 Slc12a5Q91V14 1138 aa16.42■□□□□ 0.22
Ssr1-203ENSMUST00000225246 Ankrd44B2RXR6 993 aa16.42■□□□□ 0.22
Ssr1-203ENSMUST00000225246 Wdr63B2RY71 923 aa16.42■□□□□ 0.22
Ssr1-203ENSMUST00000225246 Plekhm2Q80TQ5 1018 aa16.42■□□□□ 0.22
Ssr1-203ENSMUST00000225246 Vamp4O70480 141 aa16.41■□□□□ 0.22
Ssr1-203ENSMUST00000225246 Cavin2Q63918 418 aaKnown RBP16.41■□□□□ 0.22
Ssr1-203ENSMUST00000225246 Nsd3Q6P2L6 1439 aa16.41■□□□□ 0.22
Ssr1-203ENSMUST00000225246 Abca14E9Q8F8 1683 aa16.38■□□□□ 0.21
Ssr1-203ENSMUST00000225246 Ppp1r15aP17564 657 aa16.38■□□□□ 0.21
Ssr1-203ENSMUST00000225246 Zranb1Q7M760 708 aa16.38■□□□□ 0.21
Ssr1-203ENSMUST00000225246 Stk26Q99JT2 416 aa16.38■□□□□ 0.21
Ssr1-203ENSMUST00000225246 Nsfl1cQ9CZ44 370 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 56.5 ms