RNA–Protein interactions for RNA: ENSMUST00000221041.1

Trim9-205, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 3,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-205ENSMUST00000221041 Ccdc9Q8VC31 543 aaKnown RBP13.16□□□□□ -0.3
Trim9-205ENSMUST00000221041 Cep170Q6A065 1588 aa13.15□□□□□ -0.3
Trim9-205ENSMUST00000221041 Bcl2l13P59017 434 aa13.15□□□□□ -0.3
Trim9-205ENSMUST00000221041 Q4VA45 678 aa13.15□□□□□ -0.3
Trim9-205ENSMUST00000221041 HnrnpuQ8VEK3 800 aaKnown RBP13.15□□□□□ -0.3
Trim9-205ENSMUST00000221041 Rtn4Q99P72 1162 aaKnown RBP13.15□□□□□ -0.3
Trim9-205ENSMUST00000221041 Chmp4bQ9D8B3 224 aaKnown RBP13.15□□□□□ -0.3
Trim9-205ENSMUST00000221041 Nos1Q9Z0J4 1429 aa13.15□□□□□ -0.3
Trim9-205ENSMUST00000221041 Cdc42bpbQ7TT50 1713 aa13.15□□□□□ -0.3
Trim9-205ENSMUST00000221041 PalldQ9ET54 1408 aa13.15□□□□□ -0.31
Trim9-205ENSMUST00000221041 Rabep1O35551 862 aa13.14□□□□□ -0.31
Trim9-205ENSMUST00000221041 Eif4g2Q62448 906 aaKnown RBP13.14□□□□□ -0.31
Trim9-205ENSMUST00000221041 Dnttip2Q8R2M2 758 aaKnown RBP13.14□□□□□ -0.31
Trim9-205ENSMUST00000221041 TmpoQ61033 693 aaKnown RBP13.14□□□□□ -0.31
Trim9-205ENSMUST00000221041 Scaf11E9PZM7 1456 aaKnown RBP13.13□□□□□ -0.31
Trim9-205ENSMUST00000221041 Pola1P33609 1465 aa13.13□□□□□ -0.31
Trim9-205ENSMUST00000221041 Tfip11Q9ERA6 838 aaKnown RBP13.13□□□□□ -0.31
Trim9-205ENSMUST00000221041 TnikP83510 1323 aa13.13□□□□□ -0.31
Trim9-205ENSMUST00000221041 Smarca5Q91ZW3 1051 aaKnown RBP13.13□□□□□ -0.31
Trim9-205ENSMUST00000221041 Col17a1Q07563 1470 aa13.13□□□□□ -0.31
Trim9-205ENSMUST00000221041 Ciz1Q8VEH2 845 aa13.12□□□□□ -0.31
Trim9-205ENSMUST00000221041 Ak9G3UYQ4 1894 aa13.12□□□□□ -0.31
Trim9-205ENSMUST00000221041 Ccdc171E9Q1U1 1324 aa13.12□□□□□ -0.31
Trim9-205ENSMUST00000221041 Q3UJC8 639 aa13.11□□□□□ -0.31
Trim9-205ENSMUST00000221041 Iqgap1Q9JKF1 1657 aaKnown RBP13.11□□□□□ -0.31
Trim9-205ENSMUST00000221041 Snap23O09044 210 aa13.11□□□□□ -0.31
Trim9-205ENSMUST00000221041 Plch2A2AP18 1501 aa13.11□□□□□ -0.31
Trim9-205ENSMUST00000221041 Map3k19E9Q3S4 1311 aa13.11□□□□□ -0.31
Trim9-205ENSMUST00000221041 NhsB1AV60 1647 aa13.1□□□□□ -0.31
Trim9-205ENSMUST00000221041 Ppp1r15aP17564 657 aa13.1□□□□□ -0.31
Trim9-205ENSMUST00000221041 Fchsd2Q3USJ8 740 aa13.1□□□□□ -0.31
Trim9-205ENSMUST00000221041 Sv2bQ8BG39 683 aa13.1□□□□□ -0.31
Trim9-205ENSMUST00000221041 Slc4a10Q5DTL9 1118 aa13.1□□□□□ -0.31
Trim9-205ENSMUST00000221041 Q9D2X8 372 aa13.1□□□□□ -0.31
Trim9-205ENSMUST00000221041 Cfap65Q3V0B4 1847 aa13.1□□□□□ -0.31
Trim9-205ENSMUST00000221041 Sptbn5F6UCX4 1208 aa13.09□□□□□ -0.31
Trim9-205ENSMUST00000221041 Prim1P20664 417 aa13.09□□□□□ -0.31
Trim9-205ENSMUST00000221041 Aldh1l1Q8R0Y6 902 aa13.09□□□□□ -0.31
Trim9-205ENSMUST00000221041 Zfyve16Q80U44 1528 aa13.09□□□□□ -0.31
Trim9-205ENSMUST00000221041 Ppp1r9bQ6R891 817 aaKnown RBP13.09□□□□□ -0.31
Trim9-205ENSMUST00000221041 ShprhQ7TPQ3 1674 aa13.09□□□□□ -0.31
Trim9-205ENSMUST00000221041 Vamp4O70480 141 aa13.08□□□□□ -0.31
Trim9-205ENSMUST00000221041 Ccne1Q61457 408 aa13.08□□□□□ -0.31
Trim9-205ENSMUST00000221041 Dennd6aQ8BH65 605 aa13.08□□□□□ -0.31
Trim9-205ENSMUST00000221041 Aifm3Q3TY86 605 aa13.08□□□□□ -0.32
Trim9-205ENSMUST00000221041 Skint5A7XUY5 1461 aa13.08□□□□□ -0.32
Trim9-205ENSMUST00000221041 Gtf3c3Q3TMP1 882 aa13.08□□□□□ -0.32
Trim9-205ENSMUST00000221041 Abca8bQ8K440 1620 aa13.07□□□□□ -0.32
Trim9-205ENSMUST00000221041 Tmem132eQ6IEE6 982 aa13.07□□□□□ -0.32
Trim9-205ENSMUST00000221041 Idi2Q8BFZ6 227 aa13.07□□□□□ -0.32
Trim9-205ENSMUST00000221041 MvpQ9EQK5 861 aa13.07□□□□□ -0.32
Trim9-205ENSMUST00000221041 CarsQ9ER72 831 aaKnown RBP13.07□□□□□ -0.32
Trim9-205ENSMUST00000221041 Gm10563F6WIE4 79 aa13.06□□□□□ -0.32
Trim9-205ENSMUST00000221041 Abca6Q8K441 1624 aa13.06□□□□□ -0.32
Trim9-205ENSMUST00000221041 Depdc5P61460 1591 aa13.06□□□□□ -0.32
Trim9-205ENSMUST00000221041 Eif4a2P10630 407 aa13.06□□□□□ -0.32
Trim9-205ENSMUST00000221041 Rsph6aQ8CDR2 708 aa13.06□□□□□ -0.32
Trim9-205ENSMUST00000221041 AnkarA2RT91 1465 aa13.06□□□□□ -0.32
Trim9-205ENSMUST00000221041 CatipB9EKE5 520 aa13.05□□□□□ -0.32
Trim9-205ENSMUST00000221041 SlkO54988 1233 aa13.05□□□□□ -0.32
Trim9-205ENSMUST00000221041 Gprasp1Q5U4C1 1347 aa13.05□□□□□ -0.32
Trim9-205ENSMUST00000221041 Ankrd50F7BE84 1390 aa13.05□□□□□ -0.32
Trim9-205ENSMUST00000221041 CalcaP70160 136 aa13.05□□□□□ -0.32
Trim9-205ENSMUST00000221041 Fkbp4P30416 458 aa13.04□□□□□ -0.32
Trim9-205ENSMUST00000221041 Brpf1B2RRD7 1212 aa13.04□□□□□ -0.32
Trim9-205ENSMUST00000221041 Fyb1O35601 819 aa13.04□□□□□ -0.32
Trim9-205ENSMUST00000221041 PtmaP26350 111 aa13.04□□□□□ -0.32
Trim9-205ENSMUST00000221041 Prkar2bP31324 416 aa13.03□□□□□ -0.32
Trim9-205ENSMUST00000221041 Map3k13Q1HKZ5 959 aa13.03□□□□□ -0.32
Trim9-205ENSMUST00000221041 TatQ8QZR1 454 aa13.03□□□□□ -0.32
Trim9-205ENSMUST00000221041 FanclQ9CR14 375 aa13.03□□□□□ -0.32
Trim9-205ENSMUST00000221041 Kidins220E9Q9B7 1793 aa13.03□□□□□ -0.32
Trim9-205ENSMUST00000221041 Chd1P40201 1711 aa13.03□□□□□ -0.32
Trim9-205ENSMUST00000221041 Hfm1D3Z4R1 1434 aa13.03□□□□□ -0.32
Trim9-205ENSMUST00000221041 Phactr2B1AVP0 632 aa13.03□□□□□ -0.32
Trim9-205ENSMUST00000221041 Hmox1P14901 289 aa13.02□□□□□ -0.32
Trim9-205ENSMUST00000221041 Trim44Q9QXA7 346 aa13.02□□□□□ -0.32
Trim9-205ENSMUST00000221041 Ankrd44B2RXR6 993 aa13.02□□□□□ -0.33
Trim9-205ENSMUST00000221041 Cfdp1O88271 295 aaKnown RBP13.02□□□□□ -0.33
Trim9-205ENSMUST00000221041 Talpid3E9PV87 1520 aa13.01□□□□□ -0.33
Trim9-205ENSMUST00000221041 Efcab6Q6P1E8 1516 aa13.01□□□□□ -0.33
Trim9-205ENSMUST00000221041 Catsper2A2ARP9 588 aa13.01□□□□□ -0.33
Trim9-205ENSMUST00000221041 Nol12Q8BG17 217 aa13.01□□□□□ -0.33
Trim9-205ENSMUST00000221041 Dnajc5gQ8C632 165 aa13.01□□□□□ -0.33
Trim9-205ENSMUST00000221041 Rab11fip3Q8CHD8 1047 aa13.01□□□□□ -0.33
Trim9-205ENSMUST00000221041 Cwc27Q3TKY6 469 aa13.01□□□□□ -0.33
Trim9-205ENSMUST00000221041 Plcd4Q8K3R3 807 aa13.01□□□□□ -0.33
Trim9-205ENSMUST00000221041 Fam83gQ5SWY7 812 aa13.01□□□□□ -0.33
Trim9-205ENSMUST00000221041 Cetn4Q8K4K1 168 aa13.01□□□□□ -0.33
Trim9-205ENSMUST00000221041 Nckap5lQ6GQX2 1323 aa13□□□□□ -0.33
Trim9-205ENSMUST00000221041 Tbc1d9Q3UYK3 1264 aa13□□□□□ -0.33
Trim9-205ENSMUST00000221041 Robo2Q7TPD3 1470 aa12.99□□□□□ -0.33
Trim9-205ENSMUST00000221041 Phlpp2Q8BXA7 1320 aa12.99□□□□□ -0.33
Trim9-205ENSMUST00000221041 Ttc21aQ8C0S4 1314 aa12.99□□□□□ -0.33
Trim9-205ENSMUST00000221041 Cgnl1Q6AW69 1298 aa12.99□□□□□ -0.33
Trim9-205ENSMUST00000221041 Ssh1Q76I79 1042 aa12.99□□□□□ -0.33
Trim9-205ENSMUST00000221041 Stk3Q9JI10 497 aa12.99□□□□□ -0.33
Trim9-205ENSMUST00000221041 Cyp46a1Q9WVK8 500 aa12.99□□□□□ -0.33
Trim9-205ENSMUST00000221041 Zfp777B9EKF4 885 aa12.99□□□□□ -0.33
Trim9-205ENSMUST00000221041 AampJ3QN89 436 aa12.99□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 83.2 ms