RNA–Protein interactions for RNA: ENSMUST00000210774.1

Ebf3-208, Transcript of Transcription factor COE3, mousemouse

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Gene Ebf3, Length 2,994 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-208ENSMUST00000210774 Cd109Q8R422 1442 aa18.28■□□□□ 0.52
Ebf3-208ENSMUST00000210774 Pde4cQ3UEI1 686 aa18.28■□□□□ 0.52
Ebf3-208ENSMUST00000210774 Rps6ka5Q8C050 863 aa18.28■□□□□ 0.52
Ebf3-208ENSMUST00000210774 DroshaQ5HZJ0 1373 aaKnown RBP18.28■□□□□ 0.52
Ebf3-208ENSMUST00000210774 Gm9992B2RWK3 458 aa18.27■□□□□ 0.52
Ebf3-208ENSMUST00000210774 Unc93aQ710D3 458 aa18.27■□□□□ 0.52
Ebf3-208ENSMUST00000210774 Zscan25B2RX31 543 aa18.27■□□□□ 0.52
Ebf3-208ENSMUST00000210774 NcapgE9PWG6 1004 aa18.27■□□□□ 0.52
Ebf3-208ENSMUST00000210774 Rasa1E9PYG6 1038 aa18.27■□□□□ 0.52
Ebf3-208ENSMUST00000210774 Wdr78E9PYY5 807 aa18.27■□□□□ 0.52
Ebf3-208ENSMUST00000210774 Fam114a1Q9D281 569 aa18.27■□□□□ 0.52
Ebf3-208ENSMUST00000210774 Polr3aB2RXC6 1390 aa18.27■□□□□ 0.52
Ebf3-208ENSMUST00000210774 Syce3B5KM66 88 aa18.27■□□□□ 0.51
Ebf3-208ENSMUST00000210774 Mindy4Q3UQI9 744 aa18.27■□□□□ 0.51
Ebf3-208ENSMUST00000210774 Ksr2Q3UVC0 959 aa18.27■□□□□ 0.51
Ebf3-208ENSMUST00000210774 Asxl1P59598 1514 aa18.26■□□□□ 0.51
Ebf3-208ENSMUST00000210774 4931400O07RikQ9D4M5 137 aa18.26■□□□□ 0.51
Ebf3-208ENSMUST00000210774 AdgbG3UZ78 1657 aa18.26■□□□□ 0.51
Ebf3-208ENSMUST00000210774 Kif7B7ZNG0 1348 aa18.25■□□□□ 0.51
Ebf3-208ENSMUST00000210774 Prdm16A2A935 1275 aa18.25■□□□□ 0.51
Ebf3-208ENSMUST00000210774 Gpatch11Q3UFS4 262 aa18.25■□□□□ 0.51
Ebf3-208ENSMUST00000210774 Atl3Q91YH5 541 aa18.25■□□□□ 0.51
Ebf3-208ENSMUST00000210774 Map7O88735 730 aa18.24■□□□□ 0.51
Ebf3-208ENSMUST00000210774 Rcan3Q9JKK0 239 aa18.24■□□□□ 0.51
Ebf3-208ENSMUST00000210774 Tarbp1E9Q368 1579 aa18.24■□□□□ 0.51
Ebf3-208ENSMUST00000210774 Cpsf1Q9EPU4 1441 aaKnown RBP18.24■□□□□ 0.51
Ebf3-208ENSMUST00000210774 Clstn2Q9ER65 966 aa18.24■□□□□ 0.51
Ebf3-208ENSMUST00000210774 Tubgcp6G5E8P0 1769 aa18.23■□□□□ 0.51
Ebf3-208ENSMUST00000210774 Ecm2Q5FW85 670 aa18.23■□□□□ 0.51
Ebf3-208ENSMUST00000210774 Trpm1Q2TV84 1622 aa18.23■□□□□ 0.51
Ebf3-208ENSMUST00000210774 Fam184bQ0KK56 942 aa18.23■□□□□ 0.51
Ebf3-208ENSMUST00000210774 Uggt2E9Q4X2 1504 aa18.22■□□□□ 0.51
Ebf3-208ENSMUST00000210774 Gm10093D3YYI8 482 aa18.22■□□□□ 0.51
Ebf3-208ENSMUST00000210774 Hdac1O09106 482 aaKnown RBP18.22■□□□□ 0.51
Ebf3-208ENSMUST00000210774 Ralbp1Q62172 648 aa18.22■□□□□ 0.51
Ebf3-208ENSMUST00000210774 Robo2Q7TPD3 1470 aa18.22■□□□□ 0.51
Ebf3-208ENSMUST00000210774 Sox12Q04890 314 aa18.21■□□□□ 0.51
Ebf3-208ENSMUST00000210774 Atp7aQ64430 1491 aa18.21■□□□□ 0.51
Ebf3-208ENSMUST00000210774 Rbm42Q91V81 474 aaKnown RBP18.21■□□□□ 0.51
Ebf3-208ENSMUST00000210774 Nos1Q9Z0J4 1429 aa18.21■□□□□ 0.51
Ebf3-208ENSMUST00000210774 Rbm25B2RY56 838 aaKnown RBP18.21■□□□□ 0.5
Ebf3-208ENSMUST00000210774 Nutm1Q8BHP2 1126 aa18.21■□□□□ 0.5
Ebf3-208ENSMUST00000210774 Uspl1Q3ULM6 1089 aa18.2■□□□□ 0.5
Ebf3-208ENSMUST00000210774 Cdc42bpgQ80UW5 1551 aa18.2■□□□□ 0.5
Ebf3-208ENSMUST00000210774 Topbp1Q6ZQF0 1515 aa18.2■□□□□ 0.5
Ebf3-208ENSMUST00000210774 Casq1O09165 405 aa18.2■□□□□ 0.5
Ebf3-208ENSMUST00000210774 U2af2P26369 475 aaKnown RBP18.19■□□□□ 0.5
Ebf3-208ENSMUST00000210774 Xrn1P97789 1719 aaKnown RBP18.19■□□□□ 0.5
Ebf3-208ENSMUST00000210774 Samd1D3YXK1 519 aa18.18■□□□□ 0.5
Ebf3-208ENSMUST00000210774 Bms1Q6PGF5 1284 aaKnown RBP18.18■□□□□ 0.5
Ebf3-208ENSMUST00000210774 Grpel1Q99LP6 217 aa18.18■□□□□ 0.5
Ebf3-208ENSMUST00000210774 Cavin1O54724 392 aa18.18■□□□□ 0.5
Ebf3-208ENSMUST00000210774 Cnga1P29974 684 aa18.18■□□□□ 0.5
Ebf3-208ENSMUST00000210774 Ccdc146E9Q9F7 977 aa18.18■□□□□ 0.5
Ebf3-208ENSMUST00000210774 Kcnj4P52189 445 aa18.18■□□□□ 0.5
Ebf3-208ENSMUST00000210774 Mkrn3Q60764 544 aa18.17■□□□□ 0.5
Ebf3-208ENSMUST00000210774 Chd1lQ9CXF7 900 aa18.17■□□□□ 0.5
Ebf3-208ENSMUST00000210774 Gadd45bP22339 160 aa18.16■□□□□ 0.5
Ebf3-208ENSMUST00000210774 Ptgs1P22437 602 aa18.16■□□□□ 0.5
Ebf3-208ENSMUST00000210774 Atf7ipQ7TT18 1306 aa18.16■□□□□ 0.5
Ebf3-208ENSMUST00000210774 Apaf1O88879 1249 aa18.15■□□□□ 0.5
Ebf3-208ENSMUST00000210774 E4f1Q8CCE9 783 aa18.15■□□□□ 0.5
Ebf3-208ENSMUST00000210774 Nek4Q9Z1J2 792 aa18.15■□□□□ 0.5
Ebf3-208ENSMUST00000210774 Zfp251Q6PCX8 632 aa18.14■□□□□ 0.49
Ebf3-208ENSMUST00000210774 Sh3bp1P55194 680 aa18.13■□□□□ 0.49
Ebf3-208ENSMUST00000210774 Hecw2Q6I6G8 1578 aa18.13■□□□□ 0.49
Ebf3-208ENSMUST00000210774 KnstrnQ9D9Z1 312 aaKnown RBP18.13■□□□□ 0.49
Ebf3-208ENSMUST00000210774 PtprgQ05909 1442 aa18.12■□□□□ 0.49
Ebf3-208ENSMUST00000210774 ImpactO55091 318 aa18.12■□□□□ 0.49
Ebf3-208ENSMUST00000210774 Tbc1d9Q3UYK3 1264 aa18.12■□□□□ 0.49
Ebf3-208ENSMUST00000210774 Ncbp1Q3UYV9 790 aaKnown RBP18.12■□□□□ 0.49
Ebf3-208ENSMUST00000210774 Fan1Q69ZT1 1020 aa18.12■□□□□ 0.49
Ebf3-208ENSMUST00000210774 Srcin1Q9QWI6 1250 aa18.12■□□□□ 0.49
Ebf3-208ENSMUST00000210774 Atp2b2Q9R0K7 1198 aa18.12■□□□□ 0.49
Ebf3-208ENSMUST00000210774 Znf518aB2RRF6 1478 aaKnown RBP18.12■□□□□ 0.49
Ebf3-208ENSMUST00000210774 OvosQ3UU35 1456 aa18.12■□□□□ 0.49
Ebf3-208ENSMUST00000210774 Kiaa1107Q80TK0 1369 aa18.12■□□□□ 0.49
Ebf3-208ENSMUST00000210774 Kiaa0754Q69ZZ9 979 aa18.11■□□□□ 0.49
Ebf3-208ENSMUST00000210774 Olfml1Q8BSH2 233 aa18.11■□□□□ 0.49
Ebf3-208ENSMUST00000210774 Lemd3Q9WU40 921 aa18.11■□□□□ 0.49
Ebf3-208ENSMUST00000210774 Myo5cE9Q1F5 1742 aa18.11■□□□□ 0.49
Ebf3-208ENSMUST00000210774 SkilQ60665 675 aa18.11■□□□□ 0.49
Ebf3-208ENSMUST00000210774 Senp3Q9EP97 568 aaKnown RBP18.11■□□□□ 0.49
Ebf3-208ENSMUST00000210774 Gm16486A0A1D5RMD1 1434 aa18.11■□□□□ 0.49
Ebf3-208ENSMUST00000210774 Depdc5P61460 1591 aa18.11■□□□□ 0.49
Ebf3-208ENSMUST00000210774 ShprhQ7TPQ3 1674 aa18.1■□□□□ 0.49
Ebf3-208ENSMUST00000210774 RereQ80TZ9 1558 aa18.1■□□□□ 0.49
Ebf3-208ENSMUST00000210774 Synj2Q9D2G5 1434 aa18.1■□□□□ 0.49
Ebf3-208ENSMUST00000210774 KdrP35918 1367 aa18.1■□□□□ 0.49
Ebf3-208ENSMUST00000210774 Gm20521D3Z5F7 333 aa18.09■□□□□ 0.49
Ebf3-208ENSMUST00000210774 Maco1Q7TQE6 664 aaKnown RBP18.09■□□□□ 0.49
Ebf3-208ENSMUST00000210774 Ercc6lQ8BHK9 1240 aa18.09■□□□□ 0.49
Ebf3-208ENSMUST00000210774 Gdpd2Q9ESM6 539 aa18.09■□□□□ 0.49
Ebf3-208ENSMUST00000210774 Tmem131lQ3U3D7 1597 aa18.09■□□□□ 0.49
Ebf3-208ENSMUST00000210774 Dot1lQ6XZL8 1540 aa18.09■□□□□ 0.49
Ebf3-208ENSMUST00000210774 Kif1bQ60575 1816 aaKnown RBP18.09■□□□□ 0.49
Ebf3-208ENSMUST00000210774 AcrbpQ3V140 540 aa18.09■□□□□ 0.49
Ebf3-208ENSMUST00000210774 Nxf2Q4ZGD8 691 aa18.09■□□□□ 0.49
Ebf3-208ENSMUST00000210774 Brd1E9PZ26 1189 aaKnown RBP18.08■□□□□ 0.48
Ebf3-208ENSMUST00000210774 Anp32cQ64G17 123 aa18.08■□□□□ 0.48
Retrieved 100 of 22,080 RNA–protein pairs in 13.2 ms