RNA–Protein interactions for RNA: ENSMUST00000176893.7

Bdnf-211, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,707 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-211ENSMUST00000176893 Erich3F6QRE9 1637 aa9.36□□□□□ -0.91
Bdnf-211ENSMUST00000176893 Zmym3Q9JLM4 1370 aa9.36□□□□□ -0.91
Bdnf-211ENSMUST00000176893 Tmtc2Q56A06 836 aa9.36□□□□□ -0.91
Bdnf-211ENSMUST00000176893 Cep120Q7TSG1 988 aa9.36□□□□□ -0.91
Bdnf-211ENSMUST00000176893 Kcnv2Q8CFS6 562 aa9.36□□□□□ -0.91
Bdnf-211ENSMUST00000176893 Arhgef12Q8R4H2 1543 aaKnown RBP9.36□□□□□ -0.91
Bdnf-211ENSMUST00000176893 Gm21083A0A0G2JFD5 256 aa9.36□□□□□ -0.91
Bdnf-211ENSMUST00000176893 Gm21149A0A0G2JFY7 255 aa9.36□□□□□ -0.91
Bdnf-211ENSMUST00000176893 Gm21190A0A0G2JGJ6 266 aa9.36□□□□□ -0.91
Bdnf-211ENSMUST00000176893 Speer4cG3UXD1 256 aa9.36□□□□□ -0.91
Bdnf-211ENSMUST00000176893 Gm17019K7N6W5 255 aa9.36□□□□□ -0.91
Bdnf-211ENSMUST00000176893 Esx1O88933 382 aa9.36□□□□□ -0.91
Bdnf-211ENSMUST00000176893 Mrps9Q9D7N3 390 aaKnown RBP9.36□□□□□ -0.91
Bdnf-211ENSMUST00000176893 Setd5Q5XJV7 1441 aa9.36□□□□□ -0.91
Bdnf-211ENSMUST00000176893 Tspan18Q80WR1 248 aa9.35□□□□□ -0.91
Bdnf-211ENSMUST00000176893 Fhod3Q76LL6 1578 aa9.35□□□□□ -0.91
Bdnf-211ENSMUST00000176893 Myom3A2ABU4 1439 aa9.35□□□□□ -0.91
Bdnf-211ENSMUST00000176893 Cyb5rlB1AS42 316 aa9.35□□□□□ -0.91
Bdnf-211ENSMUST00000176893 Scp2P32020 547 aaKnown RBP9.35□□□□□ -0.91
Bdnf-211ENSMUST00000176893 Fez1Q8K0X8 392 aa9.35□□□□□ -0.91
Bdnf-211ENSMUST00000176893 OptnQ8K3K8 584 aa9.35□□□□□ -0.91
Bdnf-211ENSMUST00000176893 Zranb2Q9R020 330 aaKnown RBP9.35□□□□□ -0.91
Bdnf-211ENSMUST00000176893 PogzQ8BZH4 1409 aaKnown RBP9.35□□□□□ -0.91
Bdnf-211ENSMUST00000176893 Lrriq1Q0P5X1 1673 aa9.35□□□□□ -0.91
Bdnf-211ENSMUST00000176893 Gm21680A0A0G2JGR8 267 aa9.35□□□□□ -0.91
Bdnf-211ENSMUST00000176893 Arhgap4B1AUY3 965 aa9.35□□□□□ -0.91
Bdnf-211ENSMUST00000176893 Gm20521D3Z5F7 333 aa9.35□□□□□ -0.91
Bdnf-211ENSMUST00000176893 Gm1979E9QAN3 267 aa9.35□□□□□ -0.91
Bdnf-211ENSMUST00000176893 Pdcl2Q78Y63 240 aa9.35□□□□□ -0.91
Bdnf-211ENSMUST00000176893 Erich2E9Q1A6 463 aa9.34□□□□□ -0.91
Bdnf-211ENSMUST00000176893 Trim30aP15533 496 aa9.34□□□□□ -0.91
Bdnf-211ENSMUST00000176893 Gabpb2P81069 414 aa9.34□□□□□ -0.91
Bdnf-211ENSMUST00000176893 Q8C5K5 320 aa9.34□□□□□ -0.91
Bdnf-211ENSMUST00000176893 NcapgE9PWG6 1004 aa9.34□□□□□ -0.91
Bdnf-211ENSMUST00000176893 Il16O54824 1322 aa9.34□□□□□ -0.91
Bdnf-211ENSMUST00000176893 Igf1rQ60751 1373 aa9.34□□□□□ -0.91
Bdnf-211ENSMUST00000176893 Naip2Q9QUK4 1447 aa9.34□□□□□ -0.91
Bdnf-211ENSMUST00000176893 Gm21671G3UY31 267 aa9.34□□□□□ -0.91
Bdnf-211ENSMUST00000176893 Flt3Q00342 1000 aa9.34□□□□□ -0.91
Bdnf-211ENSMUST00000176893 Fez2Q6TYB5 348 aa9.34□□□□□ -0.91
Bdnf-211ENSMUST00000176893 Smc5Q8CG46 1101 aaKnown RBP9.34□□□□□ -0.91
Bdnf-211ENSMUST00000176893 AmotQ8VHG2 1126 aa9.34□□□□□ -0.91
Bdnf-211ENSMUST00000176893 Fgd6Q69ZL1 1399 aa9.33□□□□□ -0.92
Bdnf-211ENSMUST00000176893 BlmO88700 1416 aa9.33□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Peg3Q3URU2 1571 aa9.33□□□□□ -0.92
Bdnf-211ENSMUST00000176893 TrdnE9Q9K5 693 aa9.33□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Nap1l4Q78ZA7 375 aaKnown RBP9.33□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Tmem259Q8CIV2 574 aa9.33□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Otud6bQ8K2H2 294 aa9.33□□□□□ -0.92
Bdnf-211ENSMUST00000176893 HalP35492 657 aa9.32□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Calr3Q9D9Q6 380 aa9.32□□□□□ -0.92
Bdnf-211ENSMUST00000176893 CalrP14211 416 aaKnown RBP9.32□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Ssh1Q76I79 1042 aa9.32□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Gm9758Q80ZT2 255 aa9.32□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Fam177a1Q8BR63 207 aa9.32□□□□□ -0.92
Bdnf-211ENSMUST00000176893 IqubQ8CDK3 788 aa9.32□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Pcf11G3X9Z4 1553 aa9.32□□□□□ -0.92
Bdnf-211ENSMUST00000176893 NmiO35309 314 aa9.32□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Nbr1P97432 988 aa9.32□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Cc2d1aQ8K1A6 943 aa9.32□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Map2k1P31938 393 aa9.31□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Jph4Q80WT0 628 aa9.31□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Setbp1Q9Z180 1582 aa9.31□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Rock2P70336 1388 aa9.31□□□□□ -0.92
Bdnf-211ENSMUST00000176893 PtprkP35822 1457 aa9.31□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Tnnt1O88346 262 aa9.31□□□□□ -0.92
Bdnf-211ENSMUST00000176893 AticQ9CWJ9 592 aaKnown RBP9.31□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Akap17bA2A3V1 959 aa9.31□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Sptbn5F6UCX4 1208 aa9.31□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Bms1Q6PGF5 1284 aaKnown RBP9.31□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Q7TT23 1179 aa9.31□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Sugp2Q8CH09 1067 aa9.31□□□□□ -0.92
Bdnf-211ENSMUST00000176893 SynmQ70IV5 1561 aa9.3□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Gripap1Q8VD04 806 aa9.3□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Ccdc183A2AJB1 534 aa9.3□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Anp32eP97822 260 aaKnown RBP9.3□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Rasa4Q6PFQ7 802 aa9.3□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Trerf1Q8BXJ2 1205 aa9.3□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Homer1Q9Z2Y3 366 aa9.3□□□□□ -0.92
Bdnf-211ENSMUST00000176893 NrkQ9R0G8 1455 aa9.3□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Anapc15P60007 132 aa9.29□□□□□ -0.92
Bdnf-211ENSMUST00000176893 U2surpQ6NV83 1029 aaKnown RBP9.29□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Capn10Q9ESK3 666 aa9.29□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Mbd3Q9Z2D8 285 aaKnown RBP9.29□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Ankrd26Q811D2 1581 aa9.29□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Rps6kc1Q8BLK9 1056 aa9.29□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Dph6Q9CQ28 267 aa9.29□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Gabbr1Q9WV18 960 aa9.29□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Wdr78E9PYY5 807 aa9.29□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Birc3O08863 600 aa9.29□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Chic2Q9D9G3 165 aa9.29□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Ddit3P35639 168 aa9.28□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Pip4k2bQ80XI4 416 aa9.28□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Ttc41Q692V3 1318 aa9.28□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Hoxa2P31245 372 aa9.28□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Kank4Q6P9J5 1016 aa9.28□□□□□ -0.92
Bdnf-211ENSMUST00000176893 March6Q6ZQ89 909 aa9.28□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Ift140E9PY46 1464 aa9.28□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Mtus2Q3UHD3 1353 aa9.28□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Pnmal2G3X9N3 661 aa9.28□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms