RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 FanciQ8K368 1330 aa11.4□□□□□ -0.58
Trim39-205ENSMUST00000173369 Idi2Q8BFZ6 227 aa11.4□□□□□ -0.58
Trim39-205ENSMUST00000173369 InsrP15208 1372 aa11.4□□□□□ -0.58
Trim39-205ENSMUST00000173369 Nckap5lQ6GQX2 1323 aa11.4□□□□□ -0.59
Trim39-205ENSMUST00000173369 Tmf1B9EKI3 1091 aa11.39□□□□□ -0.59
Trim39-205ENSMUST00000173369 Abcc10Q8R4P9 1501 aa11.39□□□□□ -0.59
Trim39-205ENSMUST00000173369 Gtf3c5Q8R2T8 520 aa11.39□□□□□ -0.59
Trim39-205ENSMUST00000173369 Wdr17E9Q271 1322 aa11.38□□□□□ -0.59
Trim39-205ENSMUST00000173369 Cdca7Q9D0M2 382 aa11.38□□□□□ -0.59
Trim39-205ENSMUST00000173369 Pola1P33609 1465 aa11.38□□□□□ -0.59
Trim39-205ENSMUST00000173369 Znf526Q8BI66 675 aa11.38□□□□□ -0.59
Trim39-205ENSMUST00000173369 Cabp4Q8VHC5 271 aa11.38□□□□□ -0.59
Trim39-205ENSMUST00000173369 Bcl2l12Q9D3J3 255 aa11.38□□□□□ -0.59
Trim39-205ENSMUST00000173369 D430041D05RikF6ZGR6 1678 aa11.37□□□□□ -0.59
Trim39-205ENSMUST00000173369 Gm16486A0A1D5RMD1 1434 aa11.37□□□□□ -0.59
Trim39-205ENSMUST00000173369 PtpruB1AUH1 1446 aa11.37□□□□□ -0.59
Trim39-205ENSMUST00000173369 Eno4Q8C042 619 aa11.37□□□□□ -0.59
Trim39-205ENSMUST00000173369 Zscan10Q3URR7 782 aa11.36□□□□□ -0.59
Trim39-205ENSMUST00000173369 BccipQ9CWI3 316 aa11.36□□□□□ -0.59
Trim39-205ENSMUST00000173369 Frmpd2A0A140LI67 1392 aa11.36□□□□□ -0.59
Trim39-205ENSMUST00000173369 Txnrd1Q9JMH6 613 aa11.36□□□□□ -0.59
Trim39-205ENSMUST00000173369 C5P06684 1680 aa11.35□□□□□ -0.59
Trim39-205ENSMUST00000173369 Prm3Q62100 101 aa11.35□□□□□ -0.59
Trim39-205ENSMUST00000173369 Dzip1Q8BMD2 852 aa11.35□□□□□ -0.59
Trim39-205ENSMUST00000173369 Sirt1Q923E4 737 aa11.35□□□□□ -0.59
Trim39-205ENSMUST00000173369 KdrP35918 1367 aa11.35□□□□□ -0.59
Trim39-205ENSMUST00000173369 Sema6bO54951 886 aa11.34□□□□□ -0.59
Trim39-205ENSMUST00000173369 Iqsec2Q5DU25 1478 aa11.34□□□□□ -0.59
Trim39-205ENSMUST00000173369 ClspnQ80YR7 1315 aa11.34□□□□□ -0.59
Trim39-205ENSMUST00000173369 Ybx3Q9JKB3 361 aaKnown RBP11.34□□□□□ -0.59
Trim39-205ENSMUST00000173369 Kif7B7ZNG0 1348 aa11.33□□□□□ -0.6
Trim39-205ENSMUST00000173369 MypopQ8R4U1 393 aa11.33□□□□□ -0.6
Trim39-205ENSMUST00000173369 Als2Q920R0 1651 aa11.33□□□□□ -0.6
Trim39-205ENSMUST00000173369 Dennd6aQ8BH65 605 aa11.32□□□□□ -0.6
Trim39-205ENSMUST00000173369 Wwc2Q6NXJ0 1187 aa11.32□□□□□ -0.6
Trim39-205ENSMUST00000173369 Plin1Q8CGN5 517 aa11.32□□□□□ -0.6
Trim39-205ENSMUST00000173369 TimelessQ9R1X4 1197 aa11.32□□□□□ -0.6
Trim39-205ENSMUST00000173369 Tmem132eQ6IEE6 982 aa11.31□□□□□ -0.6
Trim39-205ENSMUST00000173369 Unc13bQ9Z1N9 1602 aa11.31□□□□□ -0.6
Trim39-205ENSMUST00000173369 Plekhg5Q66T02 1073 aa11.31□□□□□ -0.6
Trim39-205ENSMUST00000173369 Sbno1Q689Z5 1390 aa11.31□□□□□ -0.6
Trim39-205ENSMUST00000173369 PaskQ8CEE6 1383 aa11.31□□□□□ -0.6
Trim39-205ENSMUST00000173369 Gm21698A0A087WQP8 267 aa11.3□□□□□ -0.6
Trim39-205ENSMUST00000173369 Ubap1lG3UW59 384 aa11.3□□□□□ -0.6
Trim39-205ENSMUST00000173369 Gm21671G3UY31 267 aa11.3□□□□□ -0.6
Trim39-205ENSMUST00000173369 Nlgn1Q99K10 843 aa11.3□□□□□ -0.6
Trim39-205ENSMUST00000173369 Psrc1Q9D0P7 329 aa11.3□□□□□ -0.6
Trim39-205ENSMUST00000173369 Tnrc6bQ8BKI2 1810 aaKnown RBP11.3□□□□□ -0.6
Trim39-205ENSMUST00000173369 Dnajc10Q9DC23 793 aa11.29□□□□□ -0.6
Trim39-205ENSMUST00000173369 Adgrl1Q80TR1 1466 aa11.29□□□□□ -0.6
Trim39-205ENSMUST00000173369 Gm38655A0A286YDK6 273 aa11.28□□□□□ -0.6
Trim39-205ENSMUST00000173369 Cypt2Q6P924 180 aa11.27□□□□□ -0.6
Trim39-205ENSMUST00000173369 TatQ8QZR1 454 aa11.27□□□□□ -0.61
Trim39-205ENSMUST00000173369 Arhgef1Q61210 920 aaKnown RBP11.25□□□□□ -0.61
Trim39-205ENSMUST00000173369 N4bp2F8VQG7 1678 aaKnown RBP11.25□□□□□ -0.61
Trim39-205ENSMUST00000173369 Q7TT23 1179 aa11.25□□□□□ -0.61
Trim39-205ENSMUST00000173369 Sgsm1Q8BPQ7 1093 aa11.24□□□□□ -0.61
Trim39-205ENSMUST00000173369 Tcerg1Q8CGF7 1100 aaKnown RBP11.24□□□□□ -0.61
Trim39-205ENSMUST00000173369 FancaQ9JL70 1439 aa11.24□□□□□ -0.61
Trim39-205ENSMUST00000173369 Chd4Q6PDQ2 1915 aaKnown RBP11.24□□□□□ -0.61
Trim39-205ENSMUST00000173369 Fbln2P37889 1221 aa11.24□□□□□ -0.61
Trim39-205ENSMUST00000173369 Exoc6Q8R313 802 aa11.24□□□□□ -0.61
Trim39-205ENSMUST00000173369 Ccne1Q61457 408 aa11.23□□□□□ -0.61
Trim39-205ENSMUST00000173369 Cadps2Q8BYR5 1297 aa11.23□□□□□ -0.61
Trim39-205ENSMUST00000173369 Ncbp3Q8BZR9 615 aaKnown RBP11.23□□□□□ -0.61
Trim39-205ENSMUST00000173369 Gimap6Q8K349 305 aa11.23□□□□□ -0.61
Trim39-205ENSMUST00000173369 Cdhr2E9Q7P9 1308 aa11.23□□□□□ -0.61
Trim39-205ENSMUST00000173369 Atf5O70191 283 aa11.23□□□□□ -0.61
Trim39-205ENSMUST00000173369 Rtl5Q5DTT4 599 aa11.23□□□□□ -0.61
Trim39-205ENSMUST00000173369 Pak3Q61036 559 aa11.22□□□□□ -0.61
Trim39-205ENSMUST00000173369 Cntnap1O54991 1385 aa11.22□□□□□ -0.61
Trim39-205ENSMUST00000173369 Sf3b2Q3UJB0 878 aaKnown RBP11.21□□□□□ -0.61
Trim39-205ENSMUST00000173369 Ppp2r1aQ76MZ3 589 aa11.21□□□□□ -0.62
Trim39-205ENSMUST00000173369 Rpgrip1lQ8CG73 1264 aa11.21□□□□□ -0.62
Trim39-205ENSMUST00000173369 P2rx7Q9Z1M0 595 aa11.21□□□□□ -0.62
Trim39-205ENSMUST00000173369 MpndQ3TV65 487 aa11.2□□□□□ -0.62
Trim39-205ENSMUST00000173369 Mrs2Q5NCE8 434 aa11.2□□□□□ -0.62
Trim39-205ENSMUST00000173369 Nrxn1Q9CS84 1514 aa11.2□□□□□ -0.62
Trim39-205ENSMUST00000173369 HdgfP51859 237 aaKnown RBP11.2□□□□□ -0.62
Trim39-205ENSMUST00000173369 DccP70211 1447 aa11.2□□□□□ -0.62
Trim39-205ENSMUST00000173369 Znf335A2A5K6 1337 aa11.2□□□□□ -0.62
Trim39-205ENSMUST00000173369 Pik3c2aQ61194 1686 aa11.2□□□□□ -0.62
Trim39-205ENSMUST00000173369 Fmnl2A2APV2 1086 aa11.19□□□□□ -0.62
Trim39-205ENSMUST00000173369 Cald1E9QA15 768 aaKnown RBP11.19□□□□□ -0.62
Trim39-205ENSMUST00000173369 Ncapd2Q8K2Z4 1392 aa11.19□□□□□ -0.62
Trim39-205ENSMUST00000173369 Wnk3Q80XP9 1757 aa11.19□□□□□ -0.62
Trim39-205ENSMUST00000173369 Lrrc59Q922Q8 307 aaKnown RBP11.19□□□□□ -0.62
Trim39-205ENSMUST00000173369 Camta1A2A891 1682 aa11.19□□□□□ -0.62
Trim39-205ENSMUST00000173369 Astn2Q80Z10 1352 aa11.19□□□□□ -0.62
Trim39-205ENSMUST00000173369 Mon2Q80TL7 1715 aa11.19□□□□□ -0.62
Trim39-205ENSMUST00000173369 MpripP97434 1024 aa11.19□□□□□ -0.62
Trim39-205ENSMUST00000173369 Mcm10Q0VBD2 885 aa11.19□□□□□ -0.62
Trim39-205ENSMUST00000173369 Amotl2Q8K371 772 aa11.19□□□□□ -0.62
Trim39-205ENSMUST00000173369 Ncoa4Q5U4H9 625 aa11.18□□□□□ -0.62
Trim39-205ENSMUST00000173369 Lrp6O88572 1613 aa11.17□□□□□ -0.62
Trim39-205ENSMUST00000173369 Hoxc9P09633 260 aa11.17□□□□□ -0.62
Trim39-205ENSMUST00000173369 Zfp142G5E869 1843 aa11.17□□□□□ -0.62
Trim39-205ENSMUST00000173369 Col16a1Q8BLX7 1580 aa11.17□□□□□ -0.62
Trim39-205ENSMUST00000173369 IbtkQ6ZPR6 1352 aaKnown RBP11.17□□□□□ -0.62
Trim39-205ENSMUST00000173369 Kcnh5Q920E3 988 aa11.17□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 105.4 ms