RNA–Protein interactions for RNA: ENSMUST00000113388.2

Chm-202, Transcript of Rab proteins geranylgeranyltransferase component A 1, mousemouse

TSL 1 (best) BASIC

Gene Chm, Length 4,749 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chm-202ENSMUST00000113388 Evi5lH3BKQ3 813 aa8.93□□□□□ -0.98
Chm-202ENSMUST00000113388 Scaf11E9PZM7 1456 aaKnown RBP8.93□□□□□ -0.98
Chm-202ENSMUST00000113388 1700017N19RikA0A087WPJ1 469 aa8.93□□□□□ -0.98
Chm-202ENSMUST00000113388 IghaA0A0A6YXW6 389 aa8.93□□□□□ -0.98
Chm-202ENSMUST00000113388 AatkQ80YE4 1365 aa8.93□□□□□ -0.98
Chm-202ENSMUST00000113388 Clcn1Q64347 994 aa8.93□□□□□ -0.98
Chm-202ENSMUST00000113388 Med14A2ABV5 1459 aaKnown RBP8.92□□□□□ -0.98
Chm-202ENSMUST00000113388 Naip7Q9JIB3 1402 aa8.92□□□□□ -0.98
Chm-202ENSMUST00000113388 Gm6268A2A3U9 297 aa8.92□□□□□ -0.98
Chm-202ENSMUST00000113388 HnrnpmQ9D0E1 729 aaKnown RBP8.92□□□□□ -0.98
Chm-202ENSMUST00000113388 Tarbp1E9Q368 1579 aa8.92□□□□□ -0.98
Chm-202ENSMUST00000113388 Egfem1Q8C088 590 aa8.92□□□□□ -0.98
Chm-202ENSMUST00000113388 Dydc1Q9D9T0 175 aa8.92□□□□□ -0.98
Chm-202ENSMUST00000113388 Efcab6Q6P1E8 1516 aa8.91□□□□□ -0.98
Chm-202ENSMUST00000113388 Ccdc94Q9D6J3 314 aa8.91□□□□□ -0.98
Chm-202ENSMUST00000113388 Dip2aQ8BWT5 1523 aa8.91□□□□□ -0.98
Chm-202ENSMUST00000113388 AU022751B1B0V2 589 aa8.91□□□□□ -0.98
Chm-202ENSMUST00000113388 Utp14aQ640M1 767 aaKnown RBP8.91□□□□□ -0.98
Chm-202ENSMUST00000113388 Stac3Q8BZ71 360 aa8.91□□□□□ -0.98
Chm-202ENSMUST00000113388 Speer4f1Q9D5Q6 258 aa8.91□□□□□ -0.98
Chm-202ENSMUST00000113388 PdiltQ9DAN1 588 aa8.9□□□□□ -0.98
Chm-202ENSMUST00000113388 Kif3aP28741 701 aa8.9□□□□□ -0.98
Chm-202ENSMUST00000113388 Gys2Q8VCB3 704 aa8.9□□□□□ -0.98
Chm-202ENSMUST00000113388 FanciQ8K368 1330 aa8.9□□□□□ -0.99
Chm-202ENSMUST00000113388 Ca8P28651 291 aa8.89□□□□□ -0.99
Chm-202ENSMUST00000113388 Tmed8Q3UHI4 326 aa8.89□□□□□ -0.99
Chm-202ENSMUST00000113388 Prdm10Q3UTQ7 1184 aa8.89□□□□□ -0.99
Chm-202ENSMUST00000113388 Zbtb12Q9Z150 459 aa8.88□□□□□ -0.99
Chm-202ENSMUST00000113388 Adamts7Q68SA9 1657 aa8.88□□□□□ -0.99
Chm-202ENSMUST00000113388 Pnmal2G3X9N3 661 aa8.88□□□□□ -0.99
Chm-202ENSMUST00000113388 Ncoa1P70365 1447 aa8.88□□□□□ -0.99
Chm-202ENSMUST00000113388 Trim55G3X8Y1 545 aa8.88□□□□□ -0.99
Chm-202ENSMUST00000113388 MycnP03966 462 aaKnown RBP8.88□□□□□ -0.99
Chm-202ENSMUST00000113388 Cwc22Q8C5N3 908 aaKnown RBP8.88□□□□□ -0.99
Chm-202ENSMUST00000113388 Stag3O70576 1240 aa8.87□□□□□ -0.99
Chm-202ENSMUST00000113388 Kcng1A2BDX4 514 aa8.87□□□□□ -0.99
Chm-202ENSMUST00000113388 Gm973E9Q295 1059 aa8.87□□□□□ -0.99
Chm-202ENSMUST00000113388 Fez2Q6TYB5 348 aa8.87□□□□□ -0.99
Chm-202ENSMUST00000113388 Ipo8Q7TMY7 1010 aa8.87□□□□□ -0.99
Chm-202ENSMUST00000113388 Iqgap3F8VQ29 1632 aa8.87□□□□□ -0.99
Chm-202ENSMUST00000113388 Rims2Q9EQZ7 1530 aa8.87□□□□□ -0.99
Chm-202ENSMUST00000113388 Hspa1lP16627 641 aa8.86□□□□□ -0.99
Chm-202ENSMUST00000113388 Chmp5Q9D7S9 219 aa8.86□□□□□ -0.99
Chm-202ENSMUST00000113388 Pik3c2gO70167 1506 aa8.86□□□□□ -0.99
Chm-202ENSMUST00000113388 Kif13aQ9EQW7 1749 aa8.86□□□□□ -0.99
Chm-202ENSMUST00000113388 Tmem94Q7TSH8 1360 aa8.86□□□□□ -0.99
Chm-202ENSMUST00000113388 NmiO35309 314 aa8.86□□□□□ -0.99
Chm-202ENSMUST00000113388 Mex3cQ05A36 652 aaKnown RBP8.86□□□□□ -0.99
Chm-202ENSMUST00000113388 Puf60Q3UEB3 564 aaKnown RBP8.86□□□□□ -0.99
Chm-202ENSMUST00000113388 Taf3Q5HZG4 932 aa8.86□□□□□ -0.99
Chm-202ENSMUST00000113388 Chaf1aQ9QWF0 911 aa8.86□□□□□ -0.99
Chm-202ENSMUST00000113388 Bcl9Q9D219 1425 aa8.86□□□□□ -0.99
Chm-202ENSMUST00000113388 Calcoco2A2A6M5 331 aa8.86□□□□□ -0.99
Chm-202ENSMUST00000113388 NudcO35685 332 aaKnown RBP8.86□□□□□ -0.99
Chm-202ENSMUST00000113388 Lamc1P02468 1607 aaKnown RBP8.86□□□□□ -0.99
Chm-202ENSMUST00000113388 Tmem131lQ3U3D7 1597 aa8.86□□□□□ -0.99
Chm-202ENSMUST00000113388 Hmgb1P63158 215 aaKnown RBP8.86□□□□□ -0.99
Chm-202ENSMUST00000113388 Fam177a1Q8BR63 207 aa8.85□□□□□ -0.99
Chm-202ENSMUST00000113388 Mink1Q9JM52 1308 aa8.85□□□□□ -0.99
Chm-202ENSMUST00000113388 Dot1lQ6XZL8 1540 aa8.84□□□□□ -0.99
Chm-202ENSMUST00000113388 Eif2s2Q99L45 331 aaKnown RBP8.84□□□□□ -0.99
Chm-202ENSMUST00000113388 Ercc6lQ8BHK9 1240 aa8.83□□□□□ -1
Chm-202ENSMUST00000113388 Ankrd36D3Z4K0 1415 aa8.83□□□□□ -1
Chm-202ENSMUST00000113388 Ltbp4Q8K4G1 1666 aa8.83□□□□□ -1
Chm-202ENSMUST00000113388 Usp40Q8BWR4 1235 aa8.83□□□□□ -1
Chm-202ENSMUST00000113388 Dnajc2P54103 621 aaKnown RBP8.83□□□□□ -1
Chm-202ENSMUST00000113388 IqubQ8CDK3 788 aa8.83□□□□□ -1
Chm-202ENSMUST00000113388 Fez1Q8K0X8 392 aa8.83□□□□□ -1
Chm-202ENSMUST00000113388 Ino80Q6ZPV2 1559 aa8.83□□□□□ -1
Chm-202ENSMUST00000113388 Slain2Q8CI08 581 aa8.83□□□□□ -1
Chm-202ENSMUST00000113388 Cwc15Q9JHS9 229 aaKnown RBP8.83□□□□□ -1
Chm-202ENSMUST00000113388 Rimbp3Q3V0F0 1606 aa8.82□□□□□ -1
Chm-202ENSMUST00000113388 R3hcc1Q8BSI6 488 aa8.82□□□□□ -1
Chm-202ENSMUST00000113388 Rprd2Q6NXI6 1469 aaKnown RBP8.82□□□□□ -1
Chm-202ENSMUST00000113388 NcapgE9PWG6 1004 aa8.82□□□□□ -1
Chm-202ENSMUST00000113388 Sh3bp1P55194 680 aa8.82□□□□□ -1
Chm-202ENSMUST00000113388 Isy1Q69ZQ2 285 aaKnown RBP8.82□□□□□ -1
Chm-202ENSMUST00000113388 Trap1aP19473 224 aa8.82□□□□□ -1
Chm-202ENSMUST00000113388 Cnga1P29974 684 aa8.82□□□□□ -1
Chm-202ENSMUST00000113388 Rundc1Q0VDN7 615 aa8.82□□□□□ -1
Chm-202ENSMUST00000113388 HomezQ80W88 542 aa8.82□□□□□ -1
Chm-202ENSMUST00000113388 Rad21Q61550 635 aaKnown RBP8.82□□□□□ -1
Chm-202ENSMUST00000113388 Dmrt2Q8BG36 561 aa8.81□□□□□ -1
Chm-202ENSMUST00000113388 Itsn1Q9Z0R4 1714 aa8.81□□□□□ -1
Chm-202ENSMUST00000113388 1700019A02RikA0A087WPV9 146 aa8.81□□□□□ -1
Chm-202ENSMUST00000113388 Zranb1Q7M760 708 aa8.81□□□□□ -1
Chm-202ENSMUST00000113388 Pdcl2Q78Y63 240 aa8.8□□□□□ -1
Chm-202ENSMUST00000113388 Tmx4Q8C0L0 335 aa8.8□□□□□ -1
Chm-202ENSMUST00000113388 Amigo3Q8C2S7 508 aa8.8□□□□□ -1
Chm-202ENSMUST00000113388 Card11Q8CIS0 1159 aa8.8□□□□□ -1
Chm-202ENSMUST00000113388 Chd2E9PZM4 1827 aaKnown RBP8.8□□□□□ -1
Chm-202ENSMUST00000113388 Ddx17Q501J6 650 aaKnown RBP8.8□□□□□ -1
Chm-202ENSMUST00000113388 Atf3Q60765 181 aa8.8□□□□□ -1
Chm-202ENSMUST00000113388 Mroh1E0CZ22 1640 aa8.8□□□□□ -1
Chm-202ENSMUST00000113388 Tecpr2Q3UH45 1423 aa8.8□□□□□ -1
Chm-202ENSMUST00000113388 Gm10563F6WIE4 79 aa8.8□□□□□ -1
Chm-202ENSMUST00000113388 Gripap1Q8VD04 806 aa8.8□□□□□ -1
Chm-202ENSMUST00000113388 Atp2b2Q9R0K7 1198 aa8.79□□□□□ -1
Chm-202ENSMUST00000113388 Myo3aQ8K3H5 1613 aa8.79□□□□□ -1
Chm-202ENSMUST00000113388 RdxP26043 583 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 17.1 ms