RNA–Protein interactions for RNA: ENSMUST00000109468.2

Top1-201, Transcript of DNA topoisomerase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Top1, Length 3,856 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Top1-201ENSMUST00000109468 Pbrm1Q8BSQ9 1634 aaKnown RBP12.81□□□□□ -0.36
Top1-201ENSMUST00000109468 FanciQ8K368 1330 aa12.81□□□□□ -0.36
Top1-201ENSMUST00000109468 Aldh1l1Q8R0Y6 902 aa12.81□□□□□ -0.36
Top1-201ENSMUST00000109468 Smarca5Q91ZW3 1051 aaKnown RBP12.81□□□□□ -0.36
Top1-201ENSMUST00000109468 Plch2A2AP18 1501 aa12.81□□□□□ -0.36
Top1-201ENSMUST00000109468 Gapvd1Q6PAR5 1458 aa12.8□□□□□ -0.36
Top1-201ENSMUST00000109468 MvpQ9EQK5 861 aa12.8□□□□□ -0.36
Top1-201ENSMUST00000109468 Cfap74Q3UY96 1578 aa12.8□□□□□ -0.36
Top1-201ENSMUST00000109468 Lrriq1Q0P5X1 1673 aa12.8□□□□□ -0.36
Top1-201ENSMUST00000109468 Phactr2B1AVP0 632 aa12.8□□□□□ -0.36
Top1-201ENSMUST00000109468 NinlQ6ZQ12 1394 aa12.79□□□□□ -0.36
Top1-201ENSMUST00000109468 Lmod3E9QA62 571 aa12.79□□□□□ -0.36
Top1-201ENSMUST00000109468 Rusc2Q80U22 1514 aa12.79□□□□□ -0.36
Top1-201ENSMUST00000109468 AU022751B1B0V2 589 aa12.79□□□□□ -0.36
Top1-201ENSMUST00000109468 Tmc1Q8R4P5 757 aa12.79□□□□□ -0.36
Top1-201ENSMUST00000109468 Ttc41Q692V3 1318 aa12.79□□□□□ -0.36
Top1-201ENSMUST00000109468 Setd1bQ8CFT2 1985 aa12.78□□□□□ -0.36
Top1-201ENSMUST00000109468 Pcmtd1P59913 357 aa12.78□□□□□ -0.36
Top1-201ENSMUST00000109468 Nol12Q8BG17 217 aa12.78□□□□□ -0.36
Top1-201ENSMUST00000109468 4933402E13RikQ9D4D2 429 aa12.78□□□□□ -0.36
Top1-201ENSMUST00000109468 Col17a1Q07563 1470 aa12.78□□□□□ -0.36
Top1-201ENSMUST00000109468 Tbc1d9Q3UYK3 1264 aa12.77□□□□□ -0.36
Top1-201ENSMUST00000109468 Nphp4P59240 1425 aa12.77□□□□□ -0.37
Top1-201ENSMUST00000109468 Pola1P33609 1465 aa12.77□□□□□ -0.37
Top1-201ENSMUST00000109468 MccE9PWI3 1003 aa12.77□□□□□ -0.37
Top1-201ENSMUST00000109468 Fchsd2Q3USJ8 740 aa12.77□□□□□ -0.37
Top1-201ENSMUST00000109468 Pdcl3Q8BVF2 240 aa12.77□□□□□ -0.37
Top1-201ENSMUST00000109468 Adamts13Q769J6 1426 aa12.77□□□□□ -0.37
Top1-201ENSMUST00000109468 Usp54Q8BL06 1588 aaKnown RBP12.76□□□□□ -0.37
Top1-201ENSMUST00000109468 InsrP15208 1372 aa12.76□□□□□ -0.37
Top1-201ENSMUST00000109468 OvosQ3UU35 1456 aa12.76□□□□□ -0.37
Top1-201ENSMUST00000109468 Gm21190A0A0G2JGJ6 266 aa12.76□□□□□ -0.37
Top1-201ENSMUST00000109468 Paxip1Q6NZQ4 1056 aa12.76□□□□□ -0.37
Top1-201ENSMUST00000109468 Casc1Q6TDU8 730 aa12.76□□□□□ -0.37
Top1-201ENSMUST00000109468 Rtn4Q99P72 1162 aaKnown RBP12.76□□□□□ -0.37
Top1-201ENSMUST00000109468 Slc4a10Q5DTL9 1118 aa12.76□□□□□ -0.37
Top1-201ENSMUST00000109468 Sv2bQ8BG39 683 aa12.76□□□□□ -0.37
Top1-201ENSMUST00000109468 Wdr63B2RY71 923 aa12.75□□□□□ -0.37
Top1-201ENSMUST00000109468 Rrp12Q6P5B0 1295 aaKnown RBP12.75□□□□□ -0.37
Top1-201ENSMUST00000109468 Scaf11E9PZM7 1456 aaKnown RBP12.75□□□□□ -0.37
Top1-201ENSMUST00000109468 PogkQ80TC5 607 aa12.75□□□□□ -0.37
Top1-201ENSMUST00000109468 HnrnpmQ9D0E1 729 aaKnown RBP12.75□□□□□ -0.37
Top1-201ENSMUST00000109468 Asxl2Q8BZ32 1370 aa12.74□□□□□ -0.37
Top1-201ENSMUST00000109468 MyclP10166 368 aa12.74□□□□□ -0.37
Top1-201ENSMUST00000109468 Hmox1P14901 289 aa12.74□□□□□ -0.37
Top1-201ENSMUST00000109468 Rrbp1Q99PL5 1605 aaKnown RBP12.74□□□□□ -0.37
Top1-201ENSMUST00000109468 Brd1E9PZ26 1189 aaKnown RBP12.74□□□□□ -0.37
Top1-201ENSMUST00000109468 Ppip5k2Q6ZQB6 1129 aa12.74□□□□□ -0.37
Top1-201ENSMUST00000109468 Rnf214Q8BFU3 668 aaKnown RBP12.74□□□□□ -0.37
Top1-201ENSMUST00000109468 Rab11fip3Q8CHD8 1047 aa12.74□□□□□ -0.37
Top1-201ENSMUST00000109468 Cyp46a1Q9WVK8 500 aa12.74□□□□□ -0.37
Top1-201ENSMUST00000109468 Larp1bA0A0A6YXJ7 370 aaKnown RBP12.74□□□□□ -0.37
Top1-201ENSMUST00000109468 Brpf1B2RRD7 1212 aa12.74□□□□□ -0.37
Top1-201ENSMUST00000109468 Vamp4O70480 141 aa12.74□□□□□ -0.37
Top1-201ENSMUST00000109468 FanclQ9CR14 375 aa12.73□□□□□ -0.37
Top1-201ENSMUST00000109468 Kif1bQ60575 1816 aaKnown RBP12.73□□□□□ -0.37
Top1-201ENSMUST00000109468 Ankrd44B2RXR6 993 aa12.73□□□□□ -0.37
Top1-201ENSMUST00000109468 Iqgap1Q9JKF1 1657 aaKnown RBP12.73□□□□□ -0.37
Top1-201ENSMUST00000109468 Phf14Q9D4H9 881 aa12.73□□□□□ -0.37
Top1-201ENSMUST00000109468 Fam135bQ9DAI6 1403 aa12.72□□□□□ -0.37
Top1-201ENSMUST00000109468 Nsfl1cQ9CZ44 370 aaKnown RBP12.72□□□□□ -0.37
Top1-201ENSMUST00000109468 Ankrd50F7BE84 1390 aa12.72□□□□□ -0.37
Top1-201ENSMUST00000109468 TmpoQ61033 693 aaKnown RBP12.72□□□□□ -0.37
Top1-201ENSMUST00000109468 1700010I14RikQ7TPG0 532 aa12.72□□□□□ -0.37
Top1-201ENSMUST00000109468 Dnmt1P13864 1620 aaKnown RBP12.71□□□□□ -0.37
Top1-201ENSMUST00000109468 Myo3aQ8K3H5 1613 aa12.71□□□□□ -0.37
Top1-201ENSMUST00000109468 Ppp1r15aP17564 657 aa12.71□□□□□ -0.37
Top1-201ENSMUST00000109468 Prkar2bP31324 416 aa12.71□□□□□ -0.37
Top1-201ENSMUST00000109468 Hs1bp3Q3TC93 395 aa12.71□□□□□ -0.37
Top1-201ENSMUST00000109468 Wwc1Q5SXA9 1104 aa12.71□□□□□ -0.37
Top1-201ENSMUST00000109468 Filip1lQ6P6L0 1131 aa12.71□□□□□ -0.37
Top1-201ENSMUST00000109468 CalcaP70160 136 aa12.7□□□□□ -0.38
Top1-201ENSMUST00000109468 Ptch1Q61115 1434 aa12.7□□□□□ -0.38
Top1-201ENSMUST00000109468 Il4rP16382 810 aa12.7□□□□□ -0.38
Top1-201ENSMUST00000109468 Trim27Q62158 513 aa12.7□□□□□ -0.38
Top1-201ENSMUST00000109468 PalldQ9ET54 1408 aa12.7□□□□□ -0.38
Top1-201ENSMUST00000109468 Dmrtc1Q9D9R7 182 aa12.7□□□□□ -0.38
Top1-201ENSMUST00000109468 Gprasp1Q5U4C1 1347 aa12.7□□□□□ -0.38
Top1-201ENSMUST00000109468 Cep170Q6A065 1588 aa12.69□□□□□ -0.38
Top1-201ENSMUST00000109468 Bcl2l13P59017 434 aa12.69□□□□□ -0.38
Top1-201ENSMUST00000109468 CgnP59242 1191 aa12.69□□□□□ -0.38
Top1-201ENSMUST00000109468 Aifm3Q3TY86 605 aa12.69□□□□□ -0.38
Top1-201ENSMUST00000109468 Gcc1Q9D4H2 778 aa12.69□□□□□ -0.38
Top1-201ENSMUST00000109468 Lrrc7Q80TE7 1490 aa12.69□□□□□ -0.38
Top1-201ENSMUST00000109468 Pknox2Q8BG99 474 aa12.69□□□□□ -0.38
Top1-201ENSMUST00000109468 Zkscan1Q8BGS3 561 aaKnown RBP12.68□□□□□ -0.38
Top1-201ENSMUST00000109468 Zfp777B9EKF4 885 aa12.68□□□□□ -0.38
Top1-201ENSMUST00000109468 Ddrgk1Q80WW9 315 aa12.68□□□□□ -0.38
Top1-201ENSMUST00000109468 PtmsQ9D0J8 101 aaKnown RBP12.68□□□□□ -0.38
Top1-201ENSMUST00000109468 Stk3Q9JI10 497 aa12.68□□□□□ -0.38
Top1-201ENSMUST00000109468 Ap3b2Q9JME5 1082 aa12.68□□□□□ -0.38
Top1-201ENSMUST00000109468 Cwc27Q3TKY6 469 aa12.68□□□□□ -0.38
Top1-201ENSMUST00000109468 Srgap3Q812A2 1099 aa12.68□□□□□ -0.38
Top1-201ENSMUST00000109468 Rsph4aQ8BYM7 716 aa12.68□□□□□ -0.38
Top1-201ENSMUST00000109468 Ttc21aQ8C0S4 1314 aa12.67□□□□□ -0.38
Top1-201ENSMUST00000109468 Bcar3Q9QZK2 820 aa12.67□□□□□ -0.38
Top1-201ENSMUST00000109468 Znf521Q6KAS7 1311 aa12.67□□□□□ -0.38
Top1-201ENSMUST00000109468 Gm10093D3YYI8 482 aa12.67□□□□□ -0.38
Top1-201ENSMUST00000109468 Hdac1O09106 482 aaKnown RBP12.67□□□□□ -0.38
Top1-201ENSMUST00000109468 Babam1Q3UI43 333 aa12.67□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 31.2 ms