RNA–Protein interactions for RNA: ENSMUST00000109468.2

Top1-201, Transcript of DNA topoisomerase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Top1, Length 3,856 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Top1-201ENSMUST00000109468 Rhox8Q6VSS7 320 aa18.64■□□□□ 0.57
Top1-201ENSMUST00000109468 NischQ80TM9 1593 aa18.22■□□□□ 0.51
Top1-201ENSMUST00000109468 Abcc9P70170 1546 aa17.38■□□□□ 0.37
Top1-201ENSMUST00000109468 Ehmt2Q9Z148 1263 aaKnown RBP17.3■□□□□ 0.36
Top1-201ENSMUST00000109468 Ccdc136Q3TVA9 1136 aa17.12■□□□□ 0.33
Top1-201ENSMUST00000109468 Rpgrip1Q9EPQ2 1331 aa17.04■□□□□ 0.32
Top1-201ENSMUST00000109468 Abcc8B2RUS7 1588 aa17.01■□□□□ 0.31
Top1-201ENSMUST00000109468 Gm35339A0A140LHH9 1649 aa16.87■□□□□ 0.29
Top1-201ENSMUST00000109468 Ccdc180J3QNE4 1664 aa16.8■□□□□ 0.28
Top1-201ENSMUST00000109468 Rtl1Q7M732 1744 aa16.72■□□□□ 0.27
Top1-201ENSMUST00000109468 Acin1Q9JIX8 1338 aaKnown RBP16.64■□□□□ 0.25
Top1-201ENSMUST00000109468 Trim41Q5NCC3 630 aa16.63■□□□□ 0.25
Top1-201ENSMUST00000109468 HrcG5E8J6 738 aa16.48■□□□□ 0.23
Top1-201ENSMUST00000109468 Gab3Q8BSM5 595 aa16.45■□□□□ 0.22
Top1-201ENSMUST00000109468 Cngb1E1AZ71 1325 aa16.42■□□□□ 0.22
Top1-201ENSMUST00000109468 Pcgf6Q99NA9 353 aa16.24■□□□□ 0.19
Top1-201ENSMUST00000109468 Zeb1Q64318 1117 aa16.24■□□□□ 0.19
Top1-201ENSMUST00000109468 Esf1Q3V1V3 845 aaKnown RBP16.17■□□□□ 0.18
Top1-201ENSMUST00000109468 Zcchc6Q5BLK4 1491 aaKnown RBP16.13■□□□□ 0.17
Top1-201ENSMUST00000109468 Supt5hO55201 1082 aaKnown RBP16■□□□□ 0.15
Top1-201ENSMUST00000109468 Dcaf1Q80TR8 1506 aa15.99■□□□□ 0.15
Top1-201ENSMUST00000109468 Rb1cc1Q9ESK9 1588 aa15.98■□□□□ 0.15
Top1-201ENSMUST00000109468 Wdr66E9Q743 1299 aa15.91■□□□□ 0.14
Top1-201ENSMUST00000109468 Myt1lP97500 1187 aa15.87■□□□□ 0.13
Top1-201ENSMUST00000109468 UbtfP25976 765 aaKnown RBP15.86■□□□□ 0.13
Top1-201ENSMUST00000109468 Chic1Q8CBW7 227 aa15.84■□□□□ 0.13
Top1-201ENSMUST00000109468 NefmP08553 848 aa15.78■□□□□ 0.12
Top1-201ENSMUST00000109468 Las1lA2BE28 776 aaKnown RBP15.76■□□□□ 0.11
Top1-201ENSMUST00000109468 Mier1Q5UAK0 511 aa15.74■□□□□ 0.11
Top1-201ENSMUST00000109468 Npm2Q80W85 207 aa15.72■□□□□ 0.11
Top1-201ENSMUST00000109468 Cep164Q5DU05 1446 aa15.7■□□□□ 0.1
Top1-201ENSMUST00000109468 Baz1aO88379 1555 aa15.68■□□□□ 0.1
Top1-201ENSMUST00000109468 Ppargc1bQ8VHJ7 1014 aa15.67■□□□□ 0.1
Top1-201ENSMUST00000109468 Kdm5dQ62240 1548 aa15.61■□□□□ 0.09
Top1-201ENSMUST00000109468 Neurod1Q60867 357 aa15.57■□□□□ 0.08
Top1-201ENSMUST00000109468 NacadQ5SWP3 1504 aa15.54■□□□□ 0.08
Top1-201ENSMUST00000109468 ScribQ80U72 1612 aa15.53■□□□□ 0.08
Top1-201ENSMUST00000109468 Sall2Q9QX96 1004 aa15.5■□□□□ 0.07
Top1-201ENSMUST00000109468 Rsf1E9PWW9 1441 aaKnown RBP15.46■□□□□ 0.07
Top1-201ENSMUST00000109468 Brd4Q9ESU6 1400 aaKnown RBP15.44■□□□□ 0.06
Top1-201ENSMUST00000109468 Il27Q8K3I6 234 aa15.4■□□□□ 0.06
Top1-201ENSMUST00000109468 Cdk11bP24788 784 aaKnown RBP15.35■□□□□ 0.05
Top1-201ENSMUST00000109468 Ap3b1Q9Z1T1 1105 aa15.35■□□□□ 0.05
Top1-201ENSMUST00000109468 Plekhg3Q4VAC9 1341 aa15.34■□□□□ 0.05
Top1-201ENSMUST00000109468 Nop58Q6DFW4 536 aaKnown RBP15.33■□□□□ 0.04
Top1-201ENSMUST00000109468 Ccdc88bQ4QRL3 1481 aa15.31■□□□□ 0.04
Top1-201ENSMUST00000109468 Golga3P55937 1487 aa15.26■□□□□ 0.03
Top1-201ENSMUST00000109468 TonslQ6NZL6 1363 aa15.24■□□□□ 0.03
Top1-201ENSMUST00000109468 Aebp2Q9Z248 504 aaKnown RBP15.23■□□□□ 0.03
Top1-201ENSMUST00000109468 Ube2uB1AUC4 352 aa15.22■□□□□ 0.03
Top1-201ENSMUST00000109468 Smarca2Q6DIC0 1577 aa15.19■□□□□ 0.02
Top1-201ENSMUST00000109468 Csrnp3P59055 597 aa15.18■□□□□ 0.02
Top1-201ENSMUST00000109468 Cecr2E9Q2Z1 1453 aa15.17■□□□□ 0.02
Top1-201ENSMUST00000109468 Eid3Q3V124 375 aa15.16■□□□□ 0.02
Top1-201ENSMUST00000109468 ClspnQ80YR7 1315 aa15.15■□□□□ 0.02
Top1-201ENSMUST00000109468 Fam50aQ9WV03 339 aaKnown RBP15.11■□□□□ 0.01
Top1-201ENSMUST00000109468 Anks4bQ8K3X6 423 aa15.1■□□□□ 0.01
Top1-201ENSMUST00000109468 Gm38655A0A286YDK6 273 aa15.1■□□□□ 0.01
Top1-201ENSMUST00000109468 CenpbP27790 599 aa15.09■□□□□ 0.01
Top1-201ENSMUST00000109468 Clip1Q922J3 1391 aa15.09■□□□□ 0.01
Top1-201ENSMUST00000109468 Crybg2B7ZCC2 1516 aa15.09■□□□□ 0.01
Top1-201ENSMUST00000109468 Sycp2Q9CUU3 1500 aa15.09■□□□□ 0.01
Top1-201ENSMUST00000109468 Mapk8ip2Q9ERE9 830 aa15.07■□□□□ 0
Top1-201ENSMUST00000109468 Slc24a1Q91WD8 1130 aa15.01□□□□□ -0.01
Top1-201ENSMUST00000109468 Lmod2Q3UHZ5 550 aa15□□□□□ -0.01
Top1-201ENSMUST00000109468 NclP09405 707 aaKnown RBP14.99□□□□□ -0.01
Top1-201ENSMUST00000109468 1700123L14RikQ3V2K7 440 aa14.98□□□□□ -0.01
Top1-201ENSMUST00000109468 Synj1Q8CHC4 1574 aa14.95□□□□□ -0.02
Top1-201ENSMUST00000109468 CftrP26361 1476 aa14.92□□□□□ -0.02
Top1-201ENSMUST00000109468 Cep162Q6ZQ06 1403 aa14.83□□□□□ -0.03
Top1-201ENSMUST00000109468 Stra8P70278 393 aa14.76□□□□□ -0.05
Top1-201ENSMUST00000109468 Rapgef2Q8CHG7 1496 aa14.76□□□□□ -0.05
Top1-201ENSMUST00000109468 Setd5Q5XJV7 1441 aa14.76□□□□□ -0.05
Top1-201ENSMUST00000109468 Aplp2Q06335 707 aa14.75□□□□□ -0.05
Top1-201ENSMUST00000109468 Tnnt3Q9QZ47 272 aa14.75□□□□□ -0.05
Top1-201ENSMUST00000109468 Npm1Q61937 292 aaKnown RBP14.74□□□□□ -0.05
Top1-201ENSMUST00000109468 BlmO88700 1416 aa14.72□□□□□ -0.05
Top1-201ENSMUST00000109468 Fmn1Q05860 1466 aa14.72□□□□□ -0.05
Top1-201ENSMUST00000109468 Eif5bQ05D44 1216 aaKnown RBP14.69□□□□□ -0.06
Top1-201ENSMUST00000109468 Eea1Q8BL66 1411 aa14.65□□□□□ -0.06
Top1-201ENSMUST00000109468 Kif15Q6P9L6 1387 aa14.64□□□□□ -0.07
Top1-201ENSMUST00000109468 SafbD3YXK2 937 aaKnown RBP14.61□□□□□ -0.07
Top1-201ENSMUST00000109468 Chic2Q9D9G3 165 aa14.61□□□□□ -0.07
Top1-201ENSMUST00000109468 Hnrnpul2Q00PI9 745 aaKnown RBP14.6□□□□□ -0.07
Top1-201ENSMUST00000109468 Cc2d2aQ8CFW7 1633 aa14.59□□□□□ -0.07
Top1-201ENSMUST00000109468 Cttnbp2B9EJA2 1648 aa14.58□□□□□ -0.08
Top1-201ENSMUST00000109468 Ubl4bQ9CQ84 188 aa14.56□□□□□ -0.08
Top1-201ENSMUST00000109468 BicraF8VPZ9 1578 aa14.54□□□□□ -0.08
Top1-201ENSMUST00000109468 Smarca4Q3TKT4 1613 aaKnown RBP14.54□□□□□ -0.08
Top1-201ENSMUST00000109468 NrdcQ8BHG1 1161 aa14.52□□□□□ -0.08
Top1-201ENSMUST00000109468 Myt1Q8CFC2 1127 aa14.52□□□□□ -0.09
Top1-201ENSMUST00000109468 Hspa5P20029 655 aaKnown RBP14.51□□□□□ -0.09
Top1-201ENSMUST00000109468 Pelp1Q9DBD5 1123 aaKnown RBP14.51□□□□□ -0.09
Top1-201ENSMUST00000109468 Fam71e1A1L3C1 212 aa14.48□□□□□ -0.09
Top1-201ENSMUST00000109468 Top2bQ64511 1612 aa14.46□□□□□ -0.09
Top1-201ENSMUST00000109468 Top2aQ01320 1528 aaKnown RBP14.45□□□□□ -0.1
Top1-201ENSMUST00000109468 Anp32aO35381 247 aa14.44□□□□□ -0.1
Top1-201ENSMUST00000109468 Ccer2J3QPU5 274 aa14.43□□□□□ -0.1
Top1-201ENSMUST00000109468 Zbtb7cQ8VCZ7 619 aa14.43□□□□□ -0.1
Top1-201ENSMUST00000109468 Calr4Q3TQS0 420 aa14.42□□□□□ -0.1
Retrieved 100 of 22,080 RNA–protein pairs in 82 ms