RNA–Protein interactions for RNA: ENSMUST00000108910.9

Scn8a-205, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Scn8a, Length 11,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-205ENSMUST00000108910 Smc2Q8CG48 1191 aaKnown RBP8.03□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Odf2lQ9D478 642 aa8.03□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Cdkn1cP49919 348 aa8.03□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Pip4k2bQ80XI4 416 aa8.03□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Pdcl3Q8BVF2 240 aa8.02□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Dusp9Q7TNL7 452 aa8.02□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Kcnh8P59111 1102 aa8.02□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Lrrcc1Q69ZB0 1026 aa8.02□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Efcab5A0JP43 1406 aa8.02□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Kif3cO35066 796 aa8.02□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Hap1O35668 628 aa8.02□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Cog6Q8R3I3 657 aa8.02□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Gcc1Q9D4H2 778 aa8.02□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Nol8Q3UHX0 1147 aaKnown RBP8.02□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Rbm5Q91YE7 815 aaKnown RBP8.02□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Ehmt1Q5DW34 1296 aa8.01□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Commd10Q8JZY2 202 aa8.01□□□□□ -1.13
Scn8a-205ENSMUST00000108910 SelenooQ9DBC0 667 aa8.01□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Plcd4Q8K3R3 807 aa8.01□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Sel1lQ9Z2G6 790 aa8.01□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Prl7d1P04769 244 aa8.01□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Fam13bQ8K2H3 851 aa8.01□□□□□ -1.13
Scn8a-205ENSMUST00000108910 OptnQ8K3K8 584 aa8.01□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Arhgap31A6X8Z5 1425 aa8.01□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Dhx9O70133 1380 aaKnown RBP8.01□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Washc4Q3UMB9 1173 aa8.01□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Rsph6aQ8CDR2 708 aa8.01□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Stard3nlQ9DCI3 235 aa8.01□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Arhgef5E9Q7D5 1581 aa8□□□□□ -1.13
Scn8a-205ENSMUST00000108910 PrkcshO08795 521 aa8□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Olfml1Q8BSH2 233 aa8□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Urb2E9Q7L1 1524 aaKnown RBP8□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Dusp27Q148W8 1138 aa8□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Jakmip1Q8BVL9 626 aa8□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Prpf4bQ61136 1007 aaKnown RBP8□□□□□ -1.13
Scn8a-205ENSMUST00000108910 TbcaP48428 108 aaKnown RBP8□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Nop14Q8R3N1 860 aaKnown RBP8□□□□□ -1.13
Scn8a-205ENSMUST00000108910 TnmdQ9EP64 317 aa8□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Cwc15Q9JHS9 229 aaKnown RBP8□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Cep112Q5PR68 954 aa8□□□□□ -1.13
Scn8a-205ENSMUST00000108910 PsapQ61207 557 aaKnown RBP8□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Cdc37l1Q9CZP7 335 aa8□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Tmco3Q8BH01 678 aa8□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Chaf1aQ9QWF0 911 aa7.99□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Ncapd3Q6ZQK0 1506 aa7.99□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Srgap3Q812A2 1099 aa7.99□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Cep89Q9CZX2 791 aa7.99□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Cwc27Q3TKY6 469 aa7.99□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Arap1Q4LDD4 1452 aa7.99□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Eif3aP23116 1344 aaKnown RBP7.99□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Gm21698A0A087WQP8 267 aa7.99□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Gm21671G3UY31 267 aa7.99□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Sf3b2Q3UJB0 878 aaKnown RBP7.99□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Kif18aQ91WD7 886 aa7.99□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Dctn1O08788 1281 aa7.99□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Cnnm3Q32NY4 713 aa7.99□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Rbm10Q99KG3 930 aaKnown RBP7.99□□□□□ -1.13
Scn8a-205ENSMUST00000108910 NefhP19246 1090 aa7.99□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Dennd6aQ8BH65 605 aa7.99□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Cdk19Q8BWD8 501 aa7.99□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Ccdc96Q9CR92 584 aa7.99□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Evi5lH3BKQ3 813 aa7.99□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Klf15Q9EPW2 415 aa7.98□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Erc1Q99MI1 1120 aa7.98□□□□□ -1.13
Scn8a-205ENSMUST00000108910 PalmQ9Z0P4 383 aa7.98□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Fsd1Q7TPM6 496 aa7.98□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Sptbn5F6UCX4 1208 aa7.98□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Duox2A2AQ99 1517 aa7.98□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Ccdc141E9Q8Q6 1531 aa7.98□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Gm7298A0A0N4SVU1 1476 aa7.98□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Larp1bA0A0A6YXJ7 370 aaKnown RBP7.97□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Bag1Q60739 355 aa7.97□□□□□ -1.13
Scn8a-205ENSMUST00000108910 IkQ9Z1M8 557 aaKnown RBP7.97□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Exoc6bA6H5Z3 810 aa7.97□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Kiaa0753Q6A000 959 aa7.97□□□□□ -1.13
Scn8a-205ENSMUST00000108910 CarsQ9ER72 831 aaKnown RBP7.97□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Krt85Q9Z2T6 507 aa7.97□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Erich4Q3UNU4 136 aa7.97□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Tubb6Q922F4 447 aa7.97□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Mctp1E9PV86 951 aa7.97□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Speer4bQ9D9F7 267 aa7.96□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Map3k13Q1HKZ5 959 aa7.96□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Ssh1Q76I79 1042 aa7.96□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Rhot2Q8JZN7 620 aa7.96□□□□□ -1.13
Scn8a-205ENSMUST00000108910 Ggnbp2Q5SV77 696 aa7.96□□□□□ -1.14
Scn8a-205ENSMUST00000108910 Pip4k2aO70172 405 aa7.96□□□□□ -1.14
Scn8a-205ENSMUST00000108910 Tango6Q8C3S2 1079 aa7.96□□□□□ -1.14
Scn8a-205ENSMUST00000108910 Rrp9Q91WM3 475 aaKnown RBP7.96□□□□□ -1.14
Scn8a-205ENSMUST00000108910 Abcd1P48410 736 aa7.95□□□□□ -1.14
Scn8a-205ENSMUST00000108910 Stim1P70302 685 aa7.95□□□□□ -1.14
Scn8a-205ENSMUST00000108910 Fez1Q8K0X8 392 aa7.95□□□□□ -1.14
Scn8a-205ENSMUST00000108910 MvpQ9EQK5 861 aa7.95□□□□□ -1.14
Scn8a-205ENSMUST00000108910 Dnajc2P54103 621 aaKnown RBP7.95□□□□□ -1.14
Scn8a-205ENSMUST00000108910 Plekhg5Q66T02 1073 aa7.95□□□□□ -1.14
Scn8a-205ENSMUST00000108910 Ttc19Q8CC21 365 aa7.95□□□□□ -1.14
Scn8a-205ENSMUST00000108910 Cdc45Q9Z1X9 566 aa7.95□□□□□ -1.14
Scn8a-205ENSMUST00000108910 NrkQ9R0G8 1455 aa7.95□□□□□ -1.14
Scn8a-205ENSMUST00000108910 Dhx8A2A4P0 1244 aaKnown RBP7.95□□□□□ -1.14
Scn8a-205ENSMUST00000108910 Frmd3Q8BHD4 595 aa7.95□□□□□ -1.14
Scn8a-205ENSMUST00000108910 Nup88Q8CEC0 753 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 22,080 RNA–protein pairs in 15 ms