RNA–Protein interactions for RNA: ENSMUST00000108909.8

Scn8a-204, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 11,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-204ENSMUST00000108909 Map9Q3TRR0 646 aa9.57□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Tmc1Q8R4P5 757 aa9.57□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Lamb3Q61087 1168 aa9.57□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Gnai1B2RSH2 354 aa9.57□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Gnai3Q9DC51 354 aa9.57□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Cabp4Q8VHC5 271 aa9.57□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Map1bP14873 2464 aaKnown RBP9.56□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Polr1aO35134 1717 aaKnown RBP9.56□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Rab3gap2Q8BMG7 1366 aa9.56□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Ascc3E9PZJ8 2198 aaKnown RBP9.56□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Zkscan2G3X952 960 aa9.56□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Arglu1Q3UL36 271 aaKnown RBP9.56□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Ccp110Q7TSH4 1004 aa9.56□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Q9D9S1 216 aa9.56□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Psma5Q9Z2U1 241 aaKnown RBP9.56□□□□□ -0.88
Scn8a-204ENSMUST00000108909 AknaQ80VW7 1404 aa9.56□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Ccdc43Q9CR29 222 aaKnown RBP9.56□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Znf704Q9ERQ3 566 aa9.56□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Cavin1O54724 392 aa9.56□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Txndc2Q6P902 515 aa9.56□□□□□ -0.88
Scn8a-204ENSMUST00000108909 CenphQ9QYM8 241 aa9.56□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Me1P06801 572 aa9.56□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Dhx57Q6P5D3 1388 aaKnown RBP9.56□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Jakmip2D3YXK0 820 aa9.55□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Sv2bQ8BG39 683 aa9.55□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Sart1Q9Z315 806 aaKnown RBP9.55□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Mical3Q8CJ19 1993 aa9.55□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Tmem132aQ922P8 1018 aa9.55□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Kiaa0753Q6A000 959 aa9.55□□□□□ -0.88
Scn8a-204ENSMUST00000108909 CntrlA2AL36 2334 aa9.55□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Eif3aP23116 1344 aaKnown RBP9.55□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Nat10Q8K224 1024 aaKnown RBP9.55□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Gcc1Q9D4H2 778 aa9.55□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Pde1cQ64338 706 aa9.55□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Apaf1O88879 1249 aa9.54□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Krt85Q9Z2T6 507 aa9.54□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Efcab5A0JP43 1406 aa9.54□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Gbp4Q61107 620 aa9.54□□□□□ -0.88
Scn8a-204ENSMUST00000108909 March6Q6ZQ89 909 aa9.54□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Swt1Q9DBQ9 907 aa9.54□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Pdcl2Q78Y63 240 aa9.54□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Prpf4bQ61136 1007 aaKnown RBP9.54□□□□□ -0.88
Scn8a-204ENSMUST00000108909 MyclP10166 368 aa9.54□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Smc5Q8CG46 1101 aaKnown RBP9.54□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Lemd3Q9WU40 921 aa9.54□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Zfp644E9QA22 1323 aa9.54□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Arap1Q4LDD4 1452 aa9.54□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Abcd1P48410 736 aa9.53□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Uri1Q3TLD5 531 aa9.53□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Exoc8Q6PGF7 716 aa9.53□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Cfap58B2RW38 873 aa9.53□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Q4VA45 678 aa9.53□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Hap1O35668 628 aa9.53□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Cfdp1O88271 295 aaKnown RBP9.53□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Rasa1E9PYG6 1038 aa9.53□□□□□ -0.88
Scn8a-204ENSMUST00000108909 CenpqQ9CPQ5 267 aa9.53□□□□□ -0.88
Scn8a-204ENSMUST00000108909 4931400O07RikQ9D4M5 137 aa9.53□□□□□ -0.88
Scn8a-204ENSMUST00000108909 CarsQ9ER72 831 aaKnown RBP9.53□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Wdr33Q8K4P0 1330 aaKnown RBP9.53□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Adcy5P84309 1262 aa9.52□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Rbm27Q5SFM8 1060 aaKnown RBP9.52□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Mcm3P25206 812 aaKnown RBP9.52□□□□□ -0.88
Scn8a-204ENSMUST00000108909 SrrtQ99MR6 875 aaKnown RBP9.52□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Sytl4Q9R0Q1 673 aa9.52□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Bcl2l13P59017 434 aa9.52□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Zbtb22Q9Z0G7 638 aa9.52□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Cers3Q1A3B0 383 aa9.52□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Bag4Q8CI61 457 aa9.52□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Dhx8A2A4P0 1244 aaKnown RBP9.52□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Eif5P59325 429 aaKnown RBP9.52□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Hmgb1P63158 215 aaKnown RBP9.52□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Prm3Q62100 101 aa9.52□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Ccdc94Q9D6J3 314 aa9.52□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Naip1Q9QWK5 1403 aa9.52□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Ppp1r9bQ6R891 817 aaKnown RBP9.51□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Ppip5k2Q6ZQB6 1129 aa9.51□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Maats1Q8BRC6 783 aa9.51□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Phldb2Q8K1N2 1249 aa9.51□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Jakmip3Q5DTN8 844 aa9.51□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Mphosph10Q810V0 681 aaKnown RBP9.51□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Slc13a4Q8BZ82 625 aa9.51□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Pof1bQ8K4L4 587 aa9.51□□□□□ -0.89
Scn8a-204ENSMUST00000108909 TchhA0A0B4J1F9 1599 aa9.51□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Trim29Q8R2Q0 587 aa9.51□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Ciz1Q8VEH2 845 aa9.51□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Nphp1Q9QY53 687 aa9.5□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Terf2O35144 541 aa9.5□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Gnai2P08752 355 aaKnown RBP9.5□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Erlin2Q8BFZ9 340 aa9.5□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Dnaaf4Q8R368 420 aa9.5□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Maco1Q7TQE6 664 aaKnown RBP9.5□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Zeb2Q9R0G7 1215 aa9.5□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Cavin4A2AMM0 362 aa9.5□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Smc2Q8CG48 1191 aaKnown RBP9.5□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Tiam1Q60610 1591 aa9.49□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Tex2Q6ZPJ0 1128 aaKnown RBP9.49□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Fsd1Q7TPM6 496 aa9.49□□□□□ -0.89
Scn8a-204ENSMUST00000108909 CebpzP53569 1052 aaKnown RBP9.49□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Dhx9O70133 1380 aaKnown RBP9.49□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Tdrd9Q14BI7 1383 aa9.49□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 58.9 ms