RNA–Protein interactions for RNA: ENSMUST00000097609.2

Pcdhb22-201, Transcript of Protocadherin beta 22, mousemouse

TSL 2 BASIC

Gene Pcdhb22, Length 2,266 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22-201ENSMUST00000097609 Sox12Q04890 314 aa21.33■■□□□ 1.01
Pcdhb22-201ENSMUST00000097609 Ap3b2Q9JME5 1082 aa21.33■■□□□ 1.01
Pcdhb22-201ENSMUST00000097609 Hoxb7P09024 217 aa21.31■■□□□ 1
Pcdhb22-201ENSMUST00000097609 Birc3O08863 600 aa21.31■■□□□ 1
Pcdhb22-201ENSMUST00000097609 Trim28Q62318 834 aa21.31■■□□□ 1
Pcdhb22-201ENSMUST00000097609 U2af1Q9D883 239 aaKnown RBP21.3■■□□□ 1
Pcdhb22-201ENSMUST00000097609 Uspl1Q3ULM6 1089 aa21.3■■□□□ 1
Pcdhb22-201ENSMUST00000097609 Csrnp3P59055 597 aa21.29■■□□□ 1
Pcdhb22-201ENSMUST00000097609 Pik3c2aQ61194 1686 aa21.29■■□□□ 1
Pcdhb22-201ENSMUST00000097609 Sipa1l2Q80TE4 1722 aa21.28■■□□□ 1
Pcdhb22-201ENSMUST00000097609 L3mbtl2P59178 703 aa21.28■■□□□ 1
Pcdhb22-201ENSMUST00000097609 Kank1E9Q238 1360 aa21.27■■□□□ 1
Pcdhb22-201ENSMUST00000097609 Speer4f1Q9D5Q6 258 aa21.26■□□□□ 0.99
Pcdhb22-201ENSMUST00000097609 Mdc1Q5PSV9 1707 aa21.26■□□□□ 0.99
Pcdhb22-201ENSMUST00000097609 Col16a1Q8BLX7 1580 aa21.26■□□□□ 0.99
Pcdhb22-201ENSMUST00000097609 CemipQ8BI06 1361 aa21.25■□□□□ 0.99
Pcdhb22-201ENSMUST00000097609 Ppp1r15aP17564 657 aa21.25■□□□□ 0.99
Pcdhb22-201ENSMUST00000097609 Cdk12Q14AX6 1484 aaKnown RBP21.25■□□□□ 0.99
Pcdhb22-201ENSMUST00000097609 Upf2A2AT37 1269 aaKnown RBP21.24■□□□□ 0.99
Pcdhb22-201ENSMUST00000097609 Rapgef3Q8VCC8 918 aa21.24■□□□□ 0.99
Pcdhb22-201ENSMUST00000097609 Tmem2Q5FWI3 1383 aa21.23■□□□□ 0.99
Pcdhb22-201ENSMUST00000097609 Ralbp1Q62172 648 aa21.23■□□□□ 0.99
Pcdhb22-201ENSMUST00000097609 Slc12a5Q91V14 1138 aa21.23■□□□□ 0.99
Pcdhb22-201ENSMUST00000097609 Calr4Q3TQS0 420 aa21.22■□□□□ 0.99
Pcdhb22-201ENSMUST00000097609 Ubr1O70481 1757 aa21.22■□□□□ 0.99
Pcdhb22-201ENSMUST00000097609 Col18a1P39061 1774 aa21.22■□□□□ 0.99
Pcdhb22-201ENSMUST00000097609 Slain2Q8CI08 581 aa21.22■□□□□ 0.99
Pcdhb22-201ENSMUST00000097609 Frmpd2A0A140LI67 1392 aa21.21■□□□□ 0.99
Pcdhb22-201ENSMUST00000097609 Ltbp4Q8K4G1 1666 aa21.2■□□□□ 0.98
Pcdhb22-201ENSMUST00000097609 Uhrf1bp1lA2RSJ4 1457 aa21.2■□□□□ 0.98
Pcdhb22-201ENSMUST00000097609 Erbb3Q61526 1339 aa21.19■□□□□ 0.98
Pcdhb22-201ENSMUST00000097609 Scn7aB1AYL1 1681 aa21.19■□□□□ 0.98
Pcdhb22-201ENSMUST00000097609 Apaf1O88879 1249 aa21.19■□□□□ 0.98
Pcdhb22-201ENSMUST00000097609 Tcerg1Q8CGF7 1100 aaKnown RBP21.19■□□□□ 0.98
Pcdhb22-201ENSMUST00000097609 Znf541Q0GGX2 1363 aa21.19■□□□□ 0.98
Pcdhb22-201ENSMUST00000097609 Fam135bQ9DAI6 1403 aa21.19■□□□□ 0.98
Pcdhb22-201ENSMUST00000097609 Neurod2Q62414 383 aa21.18■□□□□ 0.98
Pcdhb22-201ENSMUST00000097609 Ccdc30Q8BVF4 654 aa21.18■□□□□ 0.98
Pcdhb22-201ENSMUST00000097609 Ncbp3Q8BZR9 615 aaKnown RBP21.18■□□□□ 0.98
Pcdhb22-201ENSMUST00000097609 Ttc41Q692V3 1318 aa21.18■□□□□ 0.98
Pcdhb22-201ENSMUST00000097609 Map2P20357 1828 aa21.18■□□□□ 0.98
Pcdhb22-201ENSMUST00000097609 Pip4k2bQ80XI4 416 aa21.17■□□□□ 0.98
Pcdhb22-201ENSMUST00000097609 Dennd6aQ8BH65 605 aa21.17■□□□□ 0.98
Pcdhb22-201ENSMUST00000097609 Mapk8ip3Q9ESN9 1337 aa21.17■□□□□ 0.98
Pcdhb22-201ENSMUST00000097609 Fchsd2Q3USJ8 740 aa21.16■□□□□ 0.98
Pcdhb22-201ENSMUST00000097609 PalmQ9Z0P4 383 aa21.16■□□□□ 0.98
Pcdhb22-201ENSMUST00000097609 Camta1A2A891 1682 aa21.16■□□□□ 0.98
Pcdhb22-201ENSMUST00000097609 Evi5lH3BKQ3 813 aa21.15■□□□□ 0.98
Pcdhb22-201ENSMUST00000097609 Wnk3Q80XP9 1757 aa21.15■□□□□ 0.98
Pcdhb22-201ENSMUST00000097609 Spef2Q8C9J3 1734 aa21.15■□□□□ 0.98
Pcdhb22-201ENSMUST00000097609 Rsph6aQ8CDR2 708 aa21.15■□□□□ 0.98
Pcdhb22-201ENSMUST00000097609 Nlgn1Q99K10 843 aa21.15■□□□□ 0.98
Pcdhb22-201ENSMUST00000097609 Plekhh1Q80TI1 1356 aa21.14■□□□□ 0.97
Pcdhb22-201ENSMUST00000097609 Ciz1Q8VEH2 845 aa21.14■□□□□ 0.97
Pcdhb22-201ENSMUST00000097609 Gm21190A0A0G2JGJ6 266 aa21.13■□□□□ 0.97
Pcdhb22-201ENSMUST00000097609 Slc35g1Q8BY79 368 aa21.13■□□□□ 0.97
Pcdhb22-201ENSMUST00000097609 Scaf1Q5U4C3 1256 aaKnown RBP21.12■□□□□ 0.97
Pcdhb22-201ENSMUST00000097609 FancaQ9JL70 1439 aa21.11■□□□□ 0.97
Pcdhb22-201ENSMUST00000097609 Cavin4A2AMM0 362 aa21.1■□□□□ 0.97
Pcdhb22-201ENSMUST00000097609 Cabp4Q8VHC5 271 aa21.1■□□□□ 0.97
Pcdhb22-201ENSMUST00000097609 Wdr17E9Q271 1322 aa21.1■□□□□ 0.97
Pcdhb22-201ENSMUST00000097609 Uhrf1bp1B2KF50 1429 aa21.09■□□□□ 0.97
Pcdhb22-201ENSMUST00000097609 Fyb1O35601 819 aa21.08■□□□□ 0.97
Pcdhb22-201ENSMUST00000097609 Dusp27Q148W8 1138 aa21.08■□□□□ 0.97
Pcdhb22-201ENSMUST00000097609 PaskQ8CEE6 1383 aa21.08■□□□□ 0.96
Pcdhb22-201ENSMUST00000097609 Eif4a2P10630 407 aa21.08■□□□□ 0.96
Pcdhb22-201ENSMUST00000097609 Kcna6Q61923 529 aa21.08■□□□□ 0.96
Pcdhb22-201ENSMUST00000097609 Q4VA45 678 aa21.07■□□□□ 0.96
Pcdhb22-201ENSMUST00000097609 Atxn3Q9CVD2 355 aa21.07■□□□□ 0.96
Pcdhb22-201ENSMUST00000097609 Atf3Q60765 181 aa21.07■□□□□ 0.96
Pcdhb22-201ENSMUST00000097609 Gimap6Q8K349 305 aa21.07■□□□□ 0.96
Pcdhb22-201ENSMUST00000097609 Rad17Q6NXW6 688 aa21.06■□□□□ 0.96
Pcdhb22-201ENSMUST00000097609 Nckap5lQ6GQX2 1323 aa21.06■□□□□ 0.96
Pcdhb22-201ENSMUST00000097609 Ncapd2Q8K2Z4 1392 aa21.06■□□□□ 0.96
Pcdhb22-201ENSMUST00000097609 TimelessQ9R1X4 1197 aa21.06■□□□□ 0.96
Pcdhb22-201ENSMUST00000097609 Ncoa4Q5U4H9 625 aa21.05■□□□□ 0.96
Pcdhb22-201ENSMUST00000097609 Farp2Q91VS8 1065 aa21.05■□□□□ 0.96
Pcdhb22-201ENSMUST00000097609 PtprvP70289 1705 aa21.05■□□□□ 0.96
Pcdhb22-201ENSMUST00000097609 Ano8Q6PB70 1060 aa21.04■□□□□ 0.96
Pcdhb22-201ENSMUST00000097609 Zfp777B9EKF4 885 aa21.04■□□□□ 0.96
Pcdhb22-201ENSMUST00000097609 SafbD3YXK2 937 aaKnown RBP21.04■□□□□ 0.96
Pcdhb22-201ENSMUST00000097609 Parp14Q2EMV9 1817 aa21.03■□□□□ 0.96
Pcdhb22-201ENSMUST00000097609 Swt1Q9DBQ9 907 aa21.01■□□□□ 0.95
Pcdhb22-201ENSMUST00000097609 Amigo3Q8C2S7 508 aa21.01■□□□□ 0.95
Pcdhb22-201ENSMUST00000097609 Rwdd1Q9CQK7 243 aa21.01■□□□□ 0.95
Pcdhb22-201ENSMUST00000097609 Atp7bQ64446 1462 aa21■□□□□ 0.95
Pcdhb22-201ENSMUST00000097609 Gas2l2Q5SSG4 860 aa20.99■□□□□ 0.95
Pcdhb22-201ENSMUST00000097609 MpripP97434 1024 aa20.99■□□□□ 0.95
Pcdhb22-201ENSMUST00000097609 Nfat5Q9WV30 1534 aa20.99■□□□□ 0.95
Pcdhb22-201ENSMUST00000097609 Robo1O89026 1612 aa20.98■□□□□ 0.95
Pcdhb22-201ENSMUST00000097609 GnpatP98192 678 aa20.98■□□□□ 0.95
Pcdhb22-201ENSMUST00000097609 Gli3Q61602 1583 aa20.98■□□□□ 0.95
Pcdhb22-201ENSMUST00000097609 Hoxc9P09633 260 aa20.98■□□□□ 0.95
Pcdhb22-201ENSMUST00000097609 Aplp2Q06335 707 aa20.98■□□□□ 0.95
Pcdhb22-201ENSMUST00000097609 Mcm10Q0VBD2 885 aa20.98■□□□□ 0.95
Pcdhb22-201ENSMUST00000097609 Iqcf3Q9D498 203 aa20.98■□□□□ 0.95
Pcdhb22-201ENSMUST00000097609 Siglec1Q62230 1695 aa20.97■□□□□ 0.95
Pcdhb22-201ENSMUST00000097609 Ptpn23Q6PB44 1692 aa20.97■□□□□ 0.95
Pcdhb22-201ENSMUST00000097609 Kcnh5Q920E3 988 aa20.97■□□□□ 0.95
Pcdhb22-201ENSMUST00000097609 Stk31Q99MW1 1018 aa20.97■□□□□ 0.95
Retrieved 100 of 22,080 RNA–protein pairs in 12.1 ms