RNA–Protein interactions for RNA: ENSMUST00000092971.12

Chd3-201, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Chd3, Length 6,066 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-201ENSMUST00000092971 Golim4Q8BXA1 655 aa17.94■□□□□ 0.46
Chd3-201ENSMUST00000092971 MpripP97434 1024 aa17.93■□□□□ 0.46
Chd3-201ENSMUST00000092971 Ift57Q8BXG3 429 aa17.93■□□□□ 0.46
Chd3-201ENSMUST00000092971 Mipol1Q9D9F8 279 aa17.93■□□□□ 0.46
Chd3-201ENSMUST00000092971 Zranb3Q6NZP1 1069 aa17.93■□□□□ 0.46
Chd3-201ENSMUST00000092971 Homer1Q9Z2Y3 366 aa17.93■□□□□ 0.46
Chd3-201ENSMUST00000092971 Smg7Q5RJH6 1138 aaKnown RBP17.93■□□□□ 0.46
Chd3-201ENSMUST00000092971 Trim25Q61510 634 aaKnown RBP17.93■□□□□ 0.46
Chd3-201ENSMUST00000092971 Eif3aP23116 1344 aaKnown RBP17.92■□□□□ 0.46
Chd3-201ENSMUST00000092971 Atl3Q91YH5 541 aa17.92■□□□□ 0.46
Chd3-201ENSMUST00000092971 Nop14Q8R3N1 860 aaKnown RBP17.92■□□□□ 0.46
Chd3-201ENSMUST00000092971 Gnl2Q99LH1 728 aaKnown RBP17.92■□□□□ 0.46
Chd3-201ENSMUST00000092971 Ppp2r3aB2RXC8 1150 aa17.92■□□□□ 0.46
Chd3-201ENSMUST00000092971 Paxip1Q6NZQ4 1056 aa17.92■□□□□ 0.46
Chd3-201ENSMUST00000092971 TatQ8QZR1 454 aa17.92■□□□□ 0.46
Chd3-201ENSMUST00000092971 SkilQ60665 675 aa17.91■□□□□ 0.46
Chd3-201ENSMUST00000092971 Sirt1Q923E4 737 aa17.91■□□□□ 0.46
Chd3-201ENSMUST00000092971 Gsdma3Q5Y4Y6 464 aa17.91■□□□□ 0.46
Chd3-201ENSMUST00000092971 Zkscan2G3X952 960 aa17.91■□□□□ 0.46
Chd3-201ENSMUST00000092971 Ehmt1Q5DW34 1296 aa17.91■□□□□ 0.46
Chd3-201ENSMUST00000092971 Cetn4Q8K4K1 168 aa17.91■□□□□ 0.46
Chd3-201ENSMUST00000092971 TxlnbQ8VBT1 685 aa17.9■□□□□ 0.46
Chd3-201ENSMUST00000092971 Apaf1O88879 1249 aa17.9■□□□□ 0.46
Chd3-201ENSMUST00000092971 Sf3b2Q3UJB0 878 aaKnown RBP17.9■□□□□ 0.46
Chd3-201ENSMUST00000092971 Q7TT23 1179 aa17.9■□□□□ 0.46
Chd3-201ENSMUST00000092971 Lrrfip2Q91WK0 415 aa17.9■□□□□ 0.46
Chd3-201ENSMUST00000092971 Cpa2Q504N0 417 aa17.89■□□□□ 0.45
Chd3-201ENSMUST00000092971 Samm50Q8BGH2 469 aa17.89■□□□□ 0.45
Chd3-201ENSMUST00000092971 Q4VA45 678 aa17.89■□□□□ 0.45
Chd3-201ENSMUST00000092971 Map3k13Q1HKZ5 959 aa17.89■□□□□ 0.45
Chd3-201ENSMUST00000092971 Rsph4aQ8BYM7 716 aa17.89■□□□□ 0.45
Chd3-201ENSMUST00000092971 Arhgef18Q6P9R4 1021 aa17.89■□□□□ 0.45
Chd3-201ENSMUST00000092971 AnlnQ8K298 1121 aaKnown RBP17.88■□□□□ 0.45
Chd3-201ENSMUST00000092971 Dapk1Q80YE7 1442 aa17.88■□□□□ 0.45
Chd3-201ENSMUST00000092971 L1td1Q587J6 782 aaKnown RBP17.88■□□□□ 0.45
Chd3-201ENSMUST00000092971 Cog6Q8R3I3 657 aa17.88■□□□□ 0.45
Chd3-201ENSMUST00000092971 Gsto1O09131 240 aa17.87■□□□□ 0.45
Chd3-201ENSMUST00000092971 Fsd1Q7TPM6 496 aa17.87■□□□□ 0.45
Chd3-201ENSMUST00000092971 Psmd1Q3TXS7 953 aa17.87■□□□□ 0.45
Chd3-201ENSMUST00000092971 Dhx8A2A4P0 1244 aaKnown RBP17.87■□□□□ 0.45
Chd3-201ENSMUST00000092971 Cbx1P83917 185 aaKnown RBP17.87■□□□□ 0.45
Chd3-201ENSMUST00000092971 Kif20aP97329 887 aa17.87■□□□□ 0.45
Chd3-201ENSMUST00000092971 Dydc1Q9D9T0 175 aa17.87■□□□□ 0.45
Chd3-201ENSMUST00000092971 Cwc27Q3TKY6 469 aa17.86■□□□□ 0.45
Chd3-201ENSMUST00000092971 Zkscan1Q8BGS3 561 aaKnown RBP17.86■□□□□ 0.45
Chd3-201ENSMUST00000092971 Cfap58B2RW38 873 aa17.85■□□□□ 0.45
Chd3-201ENSMUST00000092971 Lrrc45Q8CIM1 670 aa17.85■□□□□ 0.45
Chd3-201ENSMUST00000092971 Znf131Q8K3J5 619 aa17.85■□□□□ 0.45
Chd3-201ENSMUST00000092971 Ddx54Q8K4L0 874 aaKnown RBP17.85■□□□□ 0.45
Chd3-201ENSMUST00000092971 Gprasp1Q5U4C1 1347 aa17.85■□□□□ 0.45
Chd3-201ENSMUST00000092971 Stim1P70302 685 aa17.85■□□□□ 0.45
Chd3-201ENSMUST00000092971 Pdia4P08003 638 aaKnown RBP17.84■□□□□ 0.45
Chd3-201ENSMUST00000092971 Galntl5Q9D4M9 431 aa17.84■□□□□ 0.45
Chd3-201ENSMUST00000092971 Q9D9H8 365 aa17.84■□□□□ 0.45
Chd3-201ENSMUST00000092971 Map9Q3TRR0 646 aa17.84■□□□□ 0.45
Chd3-201ENSMUST00000092971 Spty2d1Q68FG3 682 aa17.84■□□□□ 0.45
Chd3-201ENSMUST00000092971 Nphp1Q9QY53 687 aa17.84■□□□□ 0.45
Chd3-201ENSMUST00000092971 Prkrip1Q9CWV6 186 aaKnown RBP17.84■□□□□ 0.45
Chd3-201ENSMUST00000092971 Cabp2Q9JLK4 216 aa17.84■□□□□ 0.45
Chd3-201ENSMUST00000092971 Fmn1Q05860 1466 aa17.84■□□□□ 0.45
Chd3-201ENSMUST00000092971 Rrp9Q91WM3 475 aaKnown RBP17.84■□□□□ 0.45
Chd3-201ENSMUST00000092971 1700010I14RikQ7TPG0 532 aa17.83■□□□□ 0.45
Chd3-201ENSMUST00000092971 Ttc19Q8CC21 365 aa17.83■□□□□ 0.45
Chd3-201ENSMUST00000092971 TefQ9JLC6 301 aa17.83■□□□□ 0.45
Chd3-201ENSMUST00000092971 TchpQ3TVW5 497 aa17.83■□□□□ 0.45
Chd3-201ENSMUST00000092971 Znf710Q3U288 666 aa17.83■□□□□ 0.45
Chd3-201ENSMUST00000092971 Tmx1Q8VBT0 278 aa17.83■□□□□ 0.44
Chd3-201ENSMUST00000092971 Ssh1Q76I79 1042 aa17.82■□□□□ 0.44
Chd3-201ENSMUST00000092971 Nat10Q8K224 1024 aaKnown RBP17.82■□□□□ 0.44
Chd3-201ENSMUST00000092971 Krt85Q9Z2T6 507 aa17.82■□□□□ 0.44
Chd3-201ENSMUST00000092971 Rapgef2Q8CHG7 1496 aa17.82■□□□□ 0.44
Chd3-201ENSMUST00000092971 Atf3Q60765 181 aa17.81■□□□□ 0.44
Chd3-201ENSMUST00000092971 Larp1bA0A0A6YXJ7 370 aaKnown RBP17.81■□□□□ 0.44
Chd3-201ENSMUST00000092971 Gnai2P08752 355 aaKnown RBP17.81■□□□□ 0.44
Chd3-201ENSMUST00000092971 Nup88Q8CEC0 753 aaKnown RBP17.81■□□□□ 0.44
Chd3-201ENSMUST00000092971 Gnl3lQ6PGG6 577 aaKnown RBP17.81■□□□□ 0.44
Chd3-201ENSMUST00000092971 Syce3B5KM66 88 aa17.81■□□□□ 0.44
Chd3-201ENSMUST00000092971 Luc7lQ9CYI4 371 aaKnown RBP17.81■□□□□ 0.44
Chd3-201ENSMUST00000092971 OptnQ8K3K8 584 aa17.81■□□□□ 0.44
Chd3-201ENSMUST00000092971 Exoc6bA6H5Z3 810 aa17.8■□□□□ 0.44
Chd3-201ENSMUST00000092971 Tspyl3Q3UYP3 334 aa17.8■□□□□ 0.44
Chd3-201ENSMUST00000092971 Iqca1Q9CUL5 857 aa17.8■□□□□ 0.44
Chd3-201ENSMUST00000092971 Sugp2Q8CH09 1067 aa17.8■□□□□ 0.44
Chd3-201ENSMUST00000092971 Pafah1b1P63005 410 aaKnown RBP17.8■□□□□ 0.44
Chd3-201ENSMUST00000092971 Map2k1P31938 393 aa17.8■□□□□ 0.44
Chd3-201ENSMUST00000092971 CenpqQ9CPQ5 267 aa17.8■□□□□ 0.44
Chd3-201ENSMUST00000092971 Atp2b2Q9R0K7 1198 aa17.79■□□□□ 0.44
Chd3-201ENSMUST00000092971 Gm42641I6L9G2 585 aa17.79■□□□□ 0.44
Chd3-201ENSMUST00000092971 AtripQ8BMG1 785 aa17.79■□□□□ 0.44
Chd3-201ENSMUST00000092971 Ccdc178Q8CDV0 866 aa17.79■□□□□ 0.44
Chd3-201ENSMUST00000092971 Zbtb22Q9Z0G7 638 aa17.79■□□□□ 0.44
Chd3-201ENSMUST00000092971 Gas2l3Q3UWW6 683 aa17.78■□□□□ 0.44
Chd3-201ENSMUST00000092971 Pmfbp1Q9WVQ0 1022 aa17.78■□□□□ 0.44
Chd3-201ENSMUST00000092971 Pip4k2aO70172 405 aa17.78■□□□□ 0.44
Chd3-201ENSMUST00000092971 Prl7d1P04769 244 aa17.78■□□□□ 0.44
Chd3-201ENSMUST00000092971 Slu7Q8BHJ9 585 aa17.78■□□□□ 0.44
Chd3-201ENSMUST00000092971 Phldb2Q8K1N2 1249 aa17.78■□□□□ 0.44
Chd3-201ENSMUST00000092971 Srgap3Q812A2 1099 aa17.78■□□□□ 0.44
Chd3-201ENSMUST00000092971 Nup133Q8R0G9 1155 aa17.78■□□□□ 0.44
Chd3-201ENSMUST00000092971 Tfip11Q9ERA6 838 aaKnown RBP17.78■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 71.5 ms