RNA–Protein interactions for RNA: ENSMUST00000088716.11

Smarcc1-201, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-201ENSMUST00000088716 Fgd6Q69ZL1 1399 aa25.85■■□□□ 1.73
Smarcc1-201ENSMUST00000088716 Gm21698A0A087WQP8 267 aa25.85■■□□□ 1.73
Smarcc1-201ENSMUST00000088716 Gm21671G3UY31 267 aa25.85■■□□□ 1.73
Smarcc1-201ENSMUST00000088716 Rnf214Q8BFU3 668 aaKnown RBP25.85■■□□□ 1.73
Smarcc1-201ENSMUST00000088716 Kcnh8P59111 1102 aa25.85■■□□□ 1.73
Smarcc1-201ENSMUST00000088716 Gcc1Q9D4H2 778 aa25.84■■□□□ 1.73
Smarcc1-201ENSMUST00000088716 PdcQ9QW08 244 aa25.83■■□□□ 1.72
Smarcc1-201ENSMUST00000088716 Q9D9S1 216 aa25.82■■□□□ 1.72
Smarcc1-201ENSMUST00000088716 Stk11ipQ3TAA7 1072 aa25.82■■□□□ 1.72
Smarcc1-201ENSMUST00000088716 HmmrQ00547 794 aaKnown RBP25.81■■□□□ 1.72
Smarcc1-201ENSMUST00000088716 Tnpo1Q8BFY9 898 aaKnown RBP25.81■■□□□ 1.72
Smarcc1-201ENSMUST00000088716 Ehmt1Q5DW34 1296 aa25.81■■□□□ 1.72
Smarcc1-201ENSMUST00000088716 Eif3aP23116 1344 aaKnown RBP25.8■■□□□ 1.72
Smarcc1-201ENSMUST00000088716 Sycp1Q62209 993 aa25.8■■□□□ 1.72
Smarcc1-201ENSMUST00000088716 Dhx9O70133 1380 aaKnown RBP25.8■■□□□ 1.72
Smarcc1-201ENSMUST00000088716 Washc4Q3UMB9 1173 aa25.8■■□□□ 1.72
Smarcc1-201ENSMUST00000088716 Afap1Q80YS6 731 aa25.79■■□□□ 1.72
Smarcc1-201ENSMUST00000088716 Nap1l1P28656 391 aaKnown RBP25.79■■□□□ 1.72
Smarcc1-201ENSMUST00000088716 Plekhd1B2RPU2 505 aa25.78■■□□□ 1.72
Smarcc1-201ENSMUST00000088716 Dusp27Q148W8 1138 aa25.78■■□□□ 1.72
Smarcc1-201ENSMUST00000088716 Nol8Q3UHX0 1147 aaKnown RBP25.78■■□□□ 1.72
Smarcc1-201ENSMUST00000088716 Prm3Q62100 101 aa25.77■■□□□ 1.72
Smarcc1-201ENSMUST00000088716 Ddx54Q8K4L0 874 aaKnown RBP25.77■■□□□ 1.72
Smarcc1-201ENSMUST00000088716 Arap1Q4LDD4 1452 aa25.77■■□□□ 1.72
Smarcc1-201ENSMUST00000088716 Zkscan1Q8BGS3 561 aaKnown RBP25.76■■□□□ 1.71
Smarcc1-201ENSMUST00000088716 Map3k1P53349 1493 aa25.76■■□□□ 1.71
Smarcc1-201ENSMUST00000088716 Il16O54824 1322 aa25.75■■□□□ 1.71
Smarcc1-201ENSMUST00000088716 Ncbp3Q8BZR9 615 aaKnown RBP25.75■■□□□ 1.71
Smarcc1-201ENSMUST00000088716 Stk38Q91VJ4 465 aa25.75■■□□□ 1.71
Smarcc1-201ENSMUST00000088716 Ncapd3Q6ZQK0 1506 aa25.75■■□□□ 1.71
Smarcc1-201ENSMUST00000088716 Speer4bQ9D9F7 267 aa25.75■■□□□ 1.71
Smarcc1-201ENSMUST00000088716 Cwc27Q3TKY6 469 aa25.75■■□□□ 1.71
Smarcc1-201ENSMUST00000088716 Plekhg5Q66T02 1073 aa25.75■■□□□ 1.71
Smarcc1-201ENSMUST00000088716 Cdc37l1Q9CZP7 335 aa25.74■■□□□ 1.71
Smarcc1-201ENSMUST00000088716 TkfcQ8VC30 578 aa25.74■■□□□ 1.71
Smarcc1-201ENSMUST00000088716 Grin2bQ01097 1482 aa25.74■■□□□ 1.71
Smarcc1-201ENSMUST00000088716 Tmc1Q8R4P5 757 aa25.74■■□□□ 1.71
Smarcc1-201ENSMUST00000088716 Hdgfl1Q2VPR5 283 aa25.73■■□□□ 1.71
Smarcc1-201ENSMUST00000088716 Tubb6Q922F4 447 aa25.73■■□□□ 1.71
Smarcc1-201ENSMUST00000088716 Gm14025A2AP89 1413 aa25.73■■□□□ 1.71
Smarcc1-201ENSMUST00000088716 Fchsd2Q3USJ8 740 aa25.72■■□□□ 1.71
Smarcc1-201ENSMUST00000088716 Pnmal2G3X9N3 661 aa25.72■■□□□ 1.71
Smarcc1-201ENSMUST00000088716 Kif3cO35066 796 aa25.72■■□□□ 1.71
Smarcc1-201ENSMUST00000088716 Ipo4Q8VI75 1082 aa25.72■■□□□ 1.71
Smarcc1-201ENSMUST00000088716 Gm21663A0A0G2JE01 267 aa25.72■■□□□ 1.71
Smarcc1-201ENSMUST00000088716 Gm7361D3Z6R1 267 aa25.72■■□□□ 1.71
Smarcc1-201ENSMUST00000088716 5031410I06RikE9Q4E0 267 aa25.72■■□□□ 1.71
Smarcc1-201ENSMUST00000088716 Gm1979E9QAN3 267 aa25.72■■□□□ 1.71
Smarcc1-201ENSMUST00000088716 Gm5862K7N5V5 267 aa25.72■■□□□ 1.71
Smarcc1-201ENSMUST00000088716 Gm10220K7N660 267 aa25.72■■□□□ 1.71
Smarcc1-201ENSMUST00000088716 Sel1lQ9Z2G6 790 aa25.72■■□□□ 1.71
Smarcc1-201ENSMUST00000088716 PogzQ8BZH4 1409 aaKnown RBP25.72■■□□□ 1.71
Smarcc1-201ENSMUST00000088716 Babam1Q3UI43 333 aa25.72■■□□□ 1.71
Smarcc1-201ENSMUST00000088716 Fam163aQ8CAA5 168 aa25.71■■□□□ 1.71
Smarcc1-201ENSMUST00000088716 PalmQ9Z0P4 383 aa25.71■■□□□ 1.71
Smarcc1-201ENSMUST00000088716 Rhot2Q8JZN7 620 aa25.71■■□□□ 1.71
Smarcc1-201ENSMUST00000088716 Larp1bA0A0A6YXJ7 370 aaKnown RBP25.7■■□□□ 1.71
Smarcc1-201ENSMUST00000088716 Srgap3Q812A2 1099 aa25.7■■□□□ 1.71
Smarcc1-201ENSMUST00000088716 TbcaP48428 108 aaKnown RBP25.7■■□□□ 1.71
Smarcc1-201ENSMUST00000088716 Commd10Q8JZY2 202 aa25.7■■□□□ 1.7
Smarcc1-201ENSMUST00000088716 Cog6Q8R3I3 657 aa25.7■■□□□ 1.7
Smarcc1-201ENSMUST00000088716 Fnbp4Q6ZQ03 1031 aa25.69■■□□□ 1.7
Smarcc1-201ENSMUST00000088716 Anp32eP97822 260 aaKnown RBP25.69■■□□□ 1.7
Smarcc1-201ENSMUST00000088716 Jakmip1Q8BVL9 626 aa25.68■■□□□ 1.7
Smarcc1-201ENSMUST00000088716 IbtkQ6ZPR6 1352 aaKnown RBP25.68■■□□□ 1.7
Smarcc1-201ENSMUST00000088716 Trim34bJ3QNR8 485 aa25.68■■□□□ 1.7
Smarcc1-201ENSMUST00000088716 Gm21680A0A0G2JGR8 267 aa25.68■■□□□ 1.7
Smarcc1-201ENSMUST00000088716 Klf15Q9EPW2 415 aa25.68■■□□□ 1.7
Smarcc1-201ENSMUST00000088716 Mns1Q61884 491 aa25.68■■□□□ 1.7
Smarcc1-201ENSMUST00000088716 Ggnbp2Q5SV77 696 aa25.67■■□□□ 1.7
Smarcc1-201ENSMUST00000088716 4930572O03RikQ8C5Y0 211 aa25.67■■□□□ 1.7
Smarcc1-201ENSMUST00000088716 Kif18aQ91WD7 886 aa25.67■■□□□ 1.7
Smarcc1-201ENSMUST00000088716 Exoc6bA6H5Z3 810 aa25.66■■□□□ 1.7
Smarcc1-201ENSMUST00000088716 Pdcl3Q8BVF2 240 aa25.66■■□□□ 1.7
Smarcc1-201ENSMUST00000088716 Flad1Q8R123 492 aa25.66■■□□□ 1.7
Smarcc1-201ENSMUST00000088716 SelenooQ9DBC0 667 aa25.66■■□□□ 1.7
Smarcc1-201ENSMUST00000088716 CadpsQ80TJ1 1355 aa25.66■■□□□ 1.7
Smarcc1-201ENSMUST00000088716 Cdkn1cP49919 348 aa25.66■■□□□ 1.7
Smarcc1-201ENSMUST00000088716 Mapk8ip1Q9WVI9 707 aa25.66■■□□□ 1.7
Smarcc1-201ENSMUST00000088716 Mroh2bQ7M6Y6 1581 aa25.65■■□□□ 1.7
Smarcc1-201ENSMUST00000088716 Ttc19Q8CC21 365 aa25.65■■□□□ 1.7
Smarcc1-201ENSMUST00000088716 Erc1Q99MI1 1120 aa25.64■■□□□ 1.7
Smarcc1-201ENSMUST00000088716 IkQ9Z1M8 557 aaKnown RBP25.64■■□□□ 1.69
Smarcc1-201ENSMUST00000088716 HnrnpmQ9D0E1 729 aaKnown RBP25.64■■□□□ 1.69
Smarcc1-201ENSMUST00000088716 Znf704Q9ERQ3 566 aa25.64■■□□□ 1.69
Smarcc1-201ENSMUST00000088716 Tiam1Q60610 1591 aa25.63■■□□□ 1.69
Smarcc1-201ENSMUST00000088716 Hoxa7P02830 229 aa25.63■■□□□ 1.69
Smarcc1-201ENSMUST00000088716 Trim34aQ99PP6 485 aa25.63■■□□□ 1.69
Smarcc1-201ENSMUST00000088716 Slc52a2Q9D8F3 450 aa25.63■■□□□ 1.69
Smarcc1-201ENSMUST00000088716 Nop14Q8R3N1 860 aaKnown RBP25.62■■□□□ 1.69
Smarcc1-201ENSMUST00000088716 Prpf4bQ61136 1007 aaKnown RBP25.62■■□□□ 1.69
Smarcc1-201ENSMUST00000088716 Btbd11Q6GQW0 1109 aa25.62■■□□□ 1.69
Smarcc1-201ENSMUST00000088716 Cep89Q9CZX2 791 aa25.62■■□□□ 1.69
Smarcc1-201ENSMUST00000088716 MvpQ9EQK5 861 aa25.62■■□□□ 1.69
Smarcc1-201ENSMUST00000088716 Cnnm3Q32NY4 713 aa25.62■■□□□ 1.69
Smarcc1-201ENSMUST00000088716 Pip4k2aO70172 405 aa25.61■■□□□ 1.69
Smarcc1-201ENSMUST00000088716 TnmdQ9EP64 317 aa25.61■■□□□ 1.69
Smarcc1-201ENSMUST00000088716 Ell2Q3UKU1 639 aa25.6■■□□□ 1.69
Smarcc1-201ENSMUST00000088716 Rapgef4Q9EQZ6 1011 aa25.6■■□□□ 1.69
Smarcc1-201ENSMUST00000088716 EprsQ8CGC7 1512 aaKnown RBP25.6■■□□□ 1.69
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms